FFCP PHASE1:Hg19::chr17:40517403..40517408,+: Difference between revisions
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|id=chr17:40517403..40517408,+
|short_description=p@chr17:40517403..40517408,+
|description=CAGE_peak_at_chr17:40517403..40517408,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:40517403..40517408,+ | |||
|coexpression_cluster_id=C1380 | |||
|description=CAGE_peak_at_chr17:40517403..40517408,+ | |||
|id=chr17:40517403..40517408,+ | |||
|ontology_enrichment_celltype=CL:0000623!2.00e-31!3;CL:0000825!2.00e-31!3;CL:0002057!1.08e-28!42;CL:0000839!3.90e-27!70;CL:0000557!9.89e-27!71;CL:0000860!1.10e-26!45;CL:0000766!7.23e-25!76;CL:0002031!5.18e-22!124;CL:0002274!4.16e-20!5;CL:0000457!4.16e-20!5;CL:0002191!4.16e-20!5;CL:0000097!4.16e-20!5;CL:0000831!4.16e-20!5;CL:0002028!4.16e-20!5;CL:0000738!2.98e-19!140;CL:0002194!2.58e-18!63;CL:0000576!2.58e-18!63;CL:0000040!2.58e-18!63;CL:0000559!2.58e-18!63;CL:0002009!1.03e-17!65;CL:0000763!2.67e-16!112;CL:0000049!2.67e-16!112;CL:0002032!5.36e-16!165;CL:0000837!5.36e-16!165;CL:0000037!2.97e-15!172;CL:0000566!2.97e-15!172;CL:0002087!4.80e-15!119;CL:0000988!2.74e-14!182;CL:0000163!1.96e-11!9;CL:0000134!5.12e-07!358;CL:0002320!7.86e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.62e-71;5!CL:0000163;4.64e-40;9!CL:0000151;9.14e-11;36!CL:0000766;6.20e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.21e-71,5;CL:0002028,3.21e-71,5;CL:0000163,4.35e-40,9;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000151,1.02e-10,36;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.53e-23!80;UBERON:0001474!8.84e-22!86;UBERON:0002405!2.58e-18!115;UBERON:0004765!2.80e-18!101;UBERON:0001434!2.80e-18!101;UBERON:0002390!4.41e-18!102;UBERON:0003061!4.41e-18!102;UBERON:0002193!2.67e-16!112;UBERON:0001282!1.19e-11!1;UBERON:0009842!1.19e-11!1;UBERON:0003704!1.19e-11!1;UBERON:0001171!1.19e-11!1;UBERON:0001172!1.19e-11!1;UBERON:0002204!2.84e-10!167;UBERON:0003081!1.84e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
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|short_description=p@chr17:40517403..40517408,+ | |||
}} | }} |
Latest revision as of 17:00, 25 July 2015
Short description: | p@chr17:40517403..40517408, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40517403..40517408, + |
Coexpression cluster: | C1380_Mast_CD14_Basophils_embryonic_pineal_CD133_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.21e-71 | 5 |
basophil mast progenitor cell | 3.21e-71 | 5 |
endocrine cell | 4.35e-40 | 9 |
myeloid lineage restricted progenitor cell | 2.11e-15 | 66 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid leukocyte | 3.42e-14 | 72 |
secretory cell | 1.02e-10 | 36 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |