FFCP PHASE1:Hg19::chr17:40556543..40556580,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:40556543..40556580,+
|short_description=p@chr17:40556543..40556580,+
|description=CAGE_peak_at_chr17:40556543..40556580,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:40556543..40556580,+ | |||
|description=CAGE_peak_at_chr17:40556543..40556580,+ | |||
|id=chr17:40556543..40556580,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.61e-24!180;CL:0000057!8.60e-16!75;CL:0000222!3.77e-14!119;CL:0000220!3.50e-11!246;CL:0002321!9.28e-11!248;CL:0000680!9.31e-11!57;CL:0000056!9.31e-11!57;CL:0000355!9.31e-11!57;CL:0000183!1.21e-10!59;CL:0000187!6.83e-10!54;CL:0002371!1.32e-09!591;CL:0000144!1.66e-09!625;CL:0002620!4.68e-09!23;CL:0000548!5.61e-09!679;CL:0000004!5.61e-09!679;CL:0000255!5.61e-09!679;CL:0000012!1.61e-08!682;CL:0000393!3.84e-08!60;CL:0000211!3.84e-08!60;CL:0000192!1.80e-07!42;CL:0000514!1.80e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.57e-10;23!CL:0002494;3.38e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.91e-14,76;CL:0002620,2.12e-10,23;CL:0000222,1.18e-09,121;CL:0000048,4.70e-08,427;CL:0000680,1.03e-07,58;CL:0000056,1.03e-07,58;CL:0000355,1.03e-07,58;CL:0000723,1.18e-07,433;CL:0002494,1.29e-07,16;CL:0000034,3.82e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.47e-08;5!DOID:450;8.47e-08;5!DOID:66;8.47e-08;5!DOID:423;8.47e-08;5!DOID:0080000;8.47e-08;5!DOID:11722;8.47e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.07e-08,5;DOID:450,5.07e-08,5;DOID:66,5.07e-08,5;DOID:423,5.07e-08,5;DOID:0080000,5.07e-08,5;DOID:11722,5.07e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.38e-13!82;UBERON:0000914!6.18e-13!83;UBERON:0002329!6.18e-13!83;UBERON:0003077!6.18e-13!83;UBERON:0003059!6.18e-13!83;UBERON:0007282!6.18e-13!83;UBERON:0009618!6.18e-13!83;UBERON:0007285!6.18e-13!83;UBERON:0004872!7.51e-12!84;UBERON:0004290!1.42e-11!70;UBERON:0001134!3.81e-10!61;UBERON:0002036!3.81e-10!61;UBERON:0003082!3.81e-10!61;UBERON:0002385!3.96e-10!63;UBERON:0001015!3.96e-10!63;UBERON:0000383!3.96e-10!63;UBERON:0002049!7.20e-10!79;UBERON:0007798!7.20e-10!79;UBERON:0000055!6.58e-09!69;UBERON:0001981!1.99e-08!60;UBERON:0007500!1.99e-08!60;UBERON:0004537!1.99e-08!60;UBERON:0006965!1.99e-08!60;UBERON:0003914!4.42e-08!118;UBERON:0001009!4.47e-08!113;UBERON:0005256!4.62e-08!143;UBERON:0004535!4.65e-08!110;UBERON:0000490!6.49e-08!138;UBERON:0001637!1.30e-07!42;UBERON:0003509!1.30e-07!42;UBERON:0004572!1.30e-07!42;UBERON:0003102!3.75e-07!95;UBERON:0000468!5.43e-07!659;UBERON:0004923!7.01e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.57e-08;33!UBERON:0004571;2.57e-08;33!UBERON:0007500;8.44e-07;56!UBERON:0001981;8.44e-07;56!UBERON:0004537;8.44e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.22e-12,83;UBERON:0007500,3.32e-10,59;UBERON:0001981,3.32e-10,59;UBERON:0004537,3.32e-10,59;UBERON:0006965,3.32e-10,59;UBERON:0000055,7.43e-10,68;UBERON:0007503,4.05e-09,78;UBERON:0001637,7.44e-09,42;UBERON:0003509,7.44e-09,42;UBERON:0004572,7.44e-09,42;UBERON:0002199,8.12e-09,46;UBERON:0002416,8.12e-09,46;UBERON:0003914,1.10e-08,117;UBERON:0004535,1.16e-08,109;UBERON:0007524,1.47e-08,73;UBERON:0000486,1.89e-08,83;UBERON:0004573,1.94e-08,33;UBERON:0004571,1.94e-08,33;UBERON:0002049,2.23e-08,78;UBERON:0007798,2.23e-08,78;UBERON:0001009,3.43e-08,112;UBERON:0002329,3.61e-08,71;UBERON:0003059,3.61e-08,71;UBERON:0007282,3.61e-08,71;UBERON:0004290,3.61e-08,71;UBERON:0009618,3.61e-08,71;UBERON:0003077,5.78e-08,72;UBERON:0007285,5.78e-08,72;UBERON:0001134,1.33e-07,62;UBERON:0002036,1.33e-07,62;UBERON:0003082,1.33e-07,62;UBERON:0002097,3.42e-07,41;UBERON:0002385,3.46e-07,64;UBERON:0001015,3.46e-07,64;UBERON:0000383,3.46e-07,64 | |||
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| ||
|short_description=p@chr17:40556543..40556580,+ | |||
}} | }} |
Latest revision as of 17:01, 25 July 2015
Short description: | p@chr17:40556543..40556580, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40556543..40556580, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.91e-14 | 76 |
skin fibroblast | 2.12e-10 | 23 |
mesodermal cell | 1.18e-09 | 121 |
multi fate stem cell | 4.70e-08 | 427 |
muscle precursor cell | 1.03e-07 | 58 |
myoblast | 1.03e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-07 | 58 |
somatic stem cell | 1.18e-07 | 433 |
cardiocyte | 1.29e-07 | 16 |
stem cell | 3.82e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.07e-08 | 5 |
myotonic disease | 5.07e-08 | 5 |
muscle tissue disease | 5.07e-08 | 5 |
myopathy | 5.07e-08 | 5 |
muscular disease | 5.07e-08 | 5 |
myotonic dystrophy | 5.07e-08 | 5 |