FFCP PHASE1:Hg19::chr3:109049145..109049147,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55211 | |EntrezGene=55211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19200 | |HGNC=19200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=459bp_to_ENST00000475135_5end | |association_with_transcript=459bp_to_ENST00000475135_5end | ||
|cluster_id=chr3:109049145..109049147,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_5_at_DPPA4_5end | |description=CAGE_peak_5_at_DPPA4_5end | ||
|id=chr3:109049145..109049147,- | |id=chr3:109049145..109049147,- | ||
|ontology_enrichment_celltype=CL:0002322!1.17e-53!5;CL:0000540!1.12e-16!6;CL:0000031!1.12e-16!6;CL:0000404!1.12e-16!6;CL:0000047!1.18e-12!8;CL:0000147!1.77e-12!14;CL:0000342!1.07e-11!1;CL:0002565!1.07e-11!1;CL:0000148!2.49e-10!10;CL:0000541!2.49e-10!10 | |ontology_enrichment_celltype=CL:0002322!1.17e-53!5;CL:0000540!1.12e-16!6;CL:0000031!1.12e-16!6;CL:0000404!1.12e-16!6;CL:0000047!1.18e-12!8;CL:0000147!1.77e-12!14;CL:0000342!1.07e-11!1;CL:0002565!1.07e-11!1;CL:0000148!2.49e-10!10;CL:0000541!2.49e-10!10 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.22e-140;5!CL:0002321;3.54e-47;15!CL:0000148;3.92e-26;10!CL:0000540;8.63e-20;6!CL:0000404;8.63e-20;6!CL:0000147;6.48e-19;14!CL:0000710;1.77e-13;20!CL:0000075;3.58e-10;27!CL:0002077;7.23e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.23e-140,5;CL:0000148,3.60e-26,10;CL:0000541,3.60e-26,10;CL:0000540,8.63e-20,6;CL:0000031,8.63e-20,6;CL:0000404,8.63e-20,6;CL:0000147,6.09e-19,14;CL:0000047,4.07e-15,8;CL:0000710,1.69e-13,20;CL:0000133,5.93e-12,59;CL:0000075,3.47e-10,27;CL:0000221,6.56e-10,72;CL:0002077,3.16e-08,34 | |||
|ontology_enrichment_development_v019=CL:0000031;8.63e-20;6!CL:0000133;3.72e-08;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.68e-14!7;UBERON:0002506!1.07e-11!1;UBERON:0001769!1.07e-11!1;UBERON:0002370!3.07e-11!4;UBERON:0005058!3.07e-11!4;UBERON:0009113!3.07e-11!4;UBERON:0003295!3.07e-11!4;UBERON:0005562!3.07e-11!4;UBERON:0003351!8.71e-08!6 | |ontology_enrichment_uberon=UBERON:0004177!9.68e-14!7;UBERON:0002506!1.07e-11!1;UBERON:0001769!1.07e-11!1;UBERON:0002370!3.07e-11!4;UBERON:0005058!3.07e-11!4;UBERON:0009113!3.07e-11!4;UBERON:0003295!3.07e-11!4;UBERON:0005562!3.07e-11!4;UBERON:0003351!8.71e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.71e-08;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p5@DPPA4 | |short_description=p5@DPPA4 | ||
}} | }} |
Latest revision as of 11:52, 19 September 2015
Short description: | p5@DPPA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DPPA4_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 459bp_to_ENST00000475135_5end |
EntrezGene: | DPPA4 |
HGNC: | 19200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.23e-140 | 5 |
melanocyte | 3.60e-26 | 10 |
melanoblast | 3.60e-26 | 10 |
neuron | 8.63e-20 | 6 |
neuroblast | 8.63e-20 | 6 |
electrically signaling cell | 8.63e-20 | 6 |
pigment cell | 6.09e-19 | 14 |
neuronal stem cell | 4.07e-15 | 8 |
neurecto-epithelial cell | 1.69e-13 | 20 |
neurectodermal cell | 5.93e-12 | 59 |
columnar/cuboidal epithelial cell | 3.47e-10 | 27 |
ectodermal cell | 6.56e-10 | 72 |
ecto-epithelial cell | 3.16e-08 | 34 |