FFCP PHASE1:Hg19::chr17:48263186..48263196,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:48263186..48263196,+
|short_description=p@chr17:48263186..48263196,+
|description=CAGE_peak_at_chr17:48263186..48263196,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48263186..48263196,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48263186..48263196,+ | |||
|id=chr17:48263186..48263196,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.59e-25!180;CL:0000057!3.14e-23!75;CL:0000048!1.34e-11!430;CL:0000723!6.73e-11!436;CL:0000034!2.41e-10!444;CL:0002620!1.71e-09!23;CL:0000144!3.34e-09!625;CL:0002371!3.76e-09!591;CL:0002320!4.30e-09!365;CL:0002570!1.05e-08!8;CL:0000183!5.54e-08!59;CL:0000134!2.76e-07!358;CL:0000630!4.08e-07!9;CL:0002334!4.39e-07!12;CL:0000680!8.52e-07!57;CL:0000056!8.52e-07!57;CL:0000355!8.52e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002570;4.65e-15;8!CL:0000135;7.96e-08;3!CL:0000388;7.96e-08;3!CL:0000134;2.25e-07;55!CL:0002334;2.26e-07;12!CL:0000048;2.51e-07;58!CL:0002615;6.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.09e-16,76;CL:0002570,1.95e-15,8;CL:0002320,5.54e-11,361;CL:0000134,2.50e-10,354;CL:0000048,9.00e-10,427;CL:0000723,2.22e-09,433;CL:0000034,7.06e-09,441;CL:0000219,1.84e-08,386;CL:0000136,7.39e-08,15;CL:0000135,8.30e-08,3;CL:0000388,8.30e-08,3;CL:0002334,2.20e-07,12;CL:0002615,6.08e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.25e-07;5!DOID:450;6.25e-07;5!DOID:66;6.25e-07;5!DOID:423;6.25e-07;5!DOID:0080000;6.25e-07;5!DOID:11722;6.25e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.76e-07,5;DOID:450,8.76e-07,5;DOID:66,8.76e-07,5;DOID:423,8.76e-07,5;DOID:0080000,8.76e-07,5;DOID:11722,8.76e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.85e-09!375;UBERON:0000914!3.42e-09!83;UBERON:0002329!3.42e-09!83;UBERON:0003077!3.42e-09!83;UBERON:0003059!3.42e-09!83;UBERON:0007282!3.42e-09!83;UBERON:0009618!3.42e-09!83;UBERON:0007285!3.42e-09!83;UBERON:0001013!3.13e-08!14;UBERON:0004290!2.22e-07!70;UBERON:0002385!2.52e-07!63;UBERON:0001015!2.52e-07!63;UBERON:0000383!2.52e-07!63;UBERON:0001134!2.66e-07!61;UBERON:0002036!2.66e-07!61;UBERON:0003082!2.66e-07!61;UBERON:0003102!3.98e-07!95;UBERON:0002199!9.16e-07!45;UBERON:0002416!9.16e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.83e-15;14!UBERON:0004457;3.78e-10;9!UBERON:0000042;3.78e-10;9!UBERON:0003688;1.25e-08;6!UBERON:0002358;1.25e-08;6!UBERON:0003684;1.25e-08;6!UBERON:0001178;1.25e-08;6!UBERON:0002384;2.85e-08;198!UBERON:0007846;7.96e-08;3!UBERON:0000043;7.96e-08;3!UBERON:0007845;7.96e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,7.93e-16,14;UBERON:0002384,2.09e-11,371;UBERON:0003688,1.07e-08,6;UBERON:0002358,1.07e-08,6;UBERON:0003684,1.07e-08,6;UBERON:0001178,1.07e-08,6;UBERON:0007846,8.30e-08,3;UBERON:0000043,8.30e-08,3;UBERON:0007845,8.30e-08,3;UBERON:0004457,1.87e-07,12;UBERON:0000042,1.87e-07,12 | |||
|phase1_expression=0.54503513781167,1.49870366723688,1.69145284915165,2.00146596706261,3.5756887554183,2.61701557230111,7.59899634504932,0,0,0,0,0.218441372130172,1.05506791291381,0.247532705920093,0.994192127183747,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0.612002073732759,1.25381888591235,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40648818027883,2.53007406669196,0.50133791063589,1.88300474649071,0,0.486634870302636,0,0.221729397462564,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0.759783069987479,0.926864265692532,6.02356903572509,1.77334191099179,0,0,7.4000264525148,0,0.404132016209064,0.490385709340376,0.454072282934794,0,0,0.624320153660641,0,0.747243402759005,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,2.37600571456411,2.22540236350701,0.910161361938026,5.03032699271367,0,0.125118519871964,0,0.438977620880838,3.0648779579902,1.50238058906597,1.24775401476023,2.15267562826634,2.77624605464138,1.05965950579781,3.00091096084402,0.412210116953756,2.06112432036503,0.18611685633159,2.19409231913646,0.584622030967192,1.00973509697646,0.368199594569197,0.161646056818812,2.84007674013291,0.201504196455281,0.847802961552438,0,0.272746120590835,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,5.88034845542168,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,1.03993478527958,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.775630294546667,3.57656445851882,1.690605505112,1.06375246633948,3.12022310734098,0,0,0,1.71573592389777,5.96883765930587,0.823240336780769,3.25736184293735,2.48774364119782,0.791951872933429,0,0,0.299918973546171,0,0,0,2.15662369942424,2.29723871668228,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.271265023699736,8.94274704582471,10.3488813502354,5.04647728108591,1.40569697991256,0,0,1.03473071292505,3.32112799267718,1.10621501125022,0.260650843404249,0.979005787313703,2.74514739048685,0,0,0,0,0,3.32629322662648,0,1.84154367945675,5.3325417942284,1.40953064181271,0.511707249066704,6.4341568457443,1.48418066444991,1.07946785661859,2.13074070375753,0.328508624055237,0,0.813472649219715,0,0,0,0.68888668898764,1.45672934405374,0.655622074797121,0,0,0.784349769176855,0,0,0,0,0,1.54227252690289,0.270946437543853,2.00675909541941,0,0,0.223874754722178,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0.386682873168488,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0.870100163485371,0.340906509664404,2.31483292681517,0,0,0,0.10115778085555,0.464845549297286,7.24068397710472,0,0,0,0,0,0,0,0.316379424718726,2.85945290885737,0.255897791311334,0,0,0,0.899362287916574,2.19629623788844,0.824686816419805,0,0,0.421258456238981,0.975267478179181,0.487426979262569,0,0.818999468447914,2.40389234321312,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,1.14729081763241,2.16147890228867,0,0.354761064070598,1.26664581178598,1.97576935775941,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,2.40773294189637,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.80784592624426,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49254802886874,1.63599316893057,1.10961172300523,0.568209015825267,1.0062716070103,0,0,1.36107831386915,1.86524640699337,0.443565449968902,0.63718706865481,0.449803112163605,0.310525913752519,2.48823724704513,1.06336685823198,1.5652351854352,3.00515217994437,0.761610424337591,0,0.909243296012797,0.644463342254931,0,0.398095888698616,0,2.74716564146234,2.69399591012735,0,0,0,0,0.906823702049089,0.231522474323834,0,0.179088841081487,0.308801447160972,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,3.17408349321616,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,3.4324388592045,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0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| ||
|short_description=p@chr17:48263186..48263196,+ | |||
}} | }} |
Latest revision as of 18:31, 25 July 2015
Short description: | p@chr17:48263186..48263196, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48263186..48263196, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.09e-16 | 76 |
mesenchymal stem cell of adipose | 1.95e-15 | 8 |
connective tissue cell | 5.54e-11 | 361 |
mesenchymal cell | 2.50e-10 | 354 |
multi fate stem cell | 9.00e-10 | 427 |
somatic stem cell | 2.22e-09 | 433 |
stem cell | 7.06e-09 | 441 |
motile cell | 1.84e-08 | 386 |
fat cell | 7.39e-08 | 15 |
fibrocyte | 8.30e-08 | 3 |
tendon cell | 8.30e-08 | 3 |
preadipocyte | 2.20e-07 | 12 |
adipocyte of omentum tissue | 6.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 7.93e-16 | 14 |
connective tissue | 2.09e-11 | 371 |
omentum | 1.07e-08 | 6 |
peritoneum | 1.07e-08 | 6 |
abdominal cavity | 1.07e-08 | 6 |
visceral peritoneum | 1.07e-08 | 6 |
dense regular connective tissue | 8.30e-08 | 3 |
tendon | 8.30e-08 | 3 |
regular connective tissue | 8.30e-08 | 3 |
cavity lining | 1.87e-07 | 12 |
serous membrane | 1.87e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.76e-07 | 5 |
myotonic disease | 8.76e-07 | 5 |
muscle tissue disease | 8.76e-07 | 5 |
myopathy | 8.76e-07 | 5 |
muscular disease | 8.76e-07 | 5 |
myotonic dystrophy | 8.76e-07 | 5 |