FFCP PHASE1:Hg19::chr17:41394342..41394365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:41394342..41394365,+ | |||
|description=CAGE_peak_at_chr17:41394342..41394365,+ | |description=CAGE_peak_at_chr17:41394342..41394365,+ | ||
|id=chr17:41394342..41394365,+ | |id=chr17:41394342..41394365,+ | ||
|ontology_enrichment_celltype=CL:0002032!2.00e-07!165;CL:0000837!2.00e-07!165;CL:0000037!3.63e-07!172;CL:0000566!3.63e-07!172;CL:0000988!4.77e-07!182 | |ontology_enrichment_celltype=CL:0002032!2.00e-07!165;CL:0000837!2.00e-07!165;CL:0000037!3.63e-07!172;CL:0000566!3.63e-07!172;CL:0000988!4.77e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000159;9.14e-14;2!CL:0002127;3.92e-08;1!CL:0000911;3.92e-08;1!CL:0000814;3.92e-08;1!CL:0000946;1.00e-07;1!CL:1001319;1.00e-07;1!CL:1000600;1.00e-07;1!CL:0000319;1.00e-07;1!CL:0000313;1.00e-07;1!CL:0000786;1.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,2.41e-13,2;CL:0002127,3.80e-08,1;CL:0000914,3.80e-08,1;CL:0000911,3.80e-08,1;CL:0000814,3.80e-08,1;CL:0002042,3.80e-08,1;CL:0002039,3.80e-08,1;CL:0002040,3.80e-08,1;CL:0002041,3.80e-08,1;CL:1001319,4.99e-08,1;CL:1000600,4.99e-08,1;CL:0000319,1.35e-07,1;CL:0000946,1.64e-07,1;CL:0000786,1.64e-07,1;CL:0000980,1.64e-07,1;CL:0000313,1.99e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.66e-36!235;DOID:14566!3.87e-35!239;DOID:0050687!1.04e-22!143;DOID:305!6.73e-22!106;DOID:0050686!1.73e-21!137;DOID:1749!1.13e-11!14;DOID:2531!2.45e-11!51;DOID:0060083!2.45e-11!51;DOID:0060058!2.15e-08!10;DOID:3119!1.19e-07!14;DOID:299!5.85e-07!25;DOID:1240!8.37e-07!39 | |ontology_enrichment_disease=DOID:162!1.66e-36!235;DOID:14566!3.87e-35!239;DOID:0050687!1.04e-22!143;DOID:305!6.73e-22!106;DOID:0050686!1.73e-21!137;DOID:1749!1.13e-11!14;DOID:2531!2.45e-11!51;DOID:0060083!2.45e-11!51;DOID:0060058!2.15e-08!10;DOID:3119!1.19e-07!14;DOID:299!5.85e-07!25;DOID:1240!8.37e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.35e-16;14!DOID:2152;1.00e-07;1!DOID:3030;1.00e-07;1!DOID:6193;1.00e-07;1!DOID:12603;1.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.29e-16,14;DOID:162,4.87e-10,235;DOID:14566,9.77e-10,239;DOID:6193,1.04e-07,1;DOID:12603,1.18e-07,1;DOID:3030,1.35e-07,1;DOID:2152,1.99e-07,1;DOID:0050687,4.08e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.00e-07;1!UBERON:0004911;1.00e-07;1!UBERON:0001256;1.00e-07;1!UBERON:0001259;1.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.99e-08,1;UBERON:0001256,4.99e-08,1;UBERON:0001259,4.99e-08,1;UBERON:0004911,1.99e-07,1 | |||
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| ||
|short_description=p@chr17:41394342..41394365,+ | |short_description=p@chr17:41394342..41394365,+ | ||
}} | }} |
Latest revision as of 17:13, 25 July 2015
Short description: | p@chr17:41394342..41394365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41394342..41394365, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 2.41e-13 | 2 |
innate effector T cell | 3.80e-08 | 1 |
immature NK T cell | 3.80e-08 | 1 |
effector T cell | 3.80e-08 | 1 |
mature NK T cell | 3.80e-08 | 1 |
immature NK T cell stage IV | 3.80e-08 | 1 |
immature NK T cell stage I | 3.80e-08 | 1 |
immature NK T cell stage II | 3.80e-08 | 1 |
immature NK T cell stage III | 3.80e-08 | 1 |
bladder cell | 4.99e-08 | 1 |
lower urinary tract cell | 4.99e-08 | 1 |
mucus secreting cell | 1.35e-07 | 1 |
antibody secreting cell | 1.64e-07 | 1 |
plasma cell | 1.64e-07 | 1 |
plasmablast | 1.64e-07 | 1 |
serous secreting cell | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.99e-08 | 1 |
wall of urinary bladder | 4.99e-08 | 1 |
mucosa of urinary bladder | 4.99e-08 | 1 |
epithelium of female gonad | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.29e-16 | 14 |
cancer | 4.87e-10 | 235 |
disease of cellular proliferation | 9.77e-10 | 239 |
epithelioid sarcoma | 1.04e-07 | 1 |
acute leukemia | 1.18e-07 | 1 |
mucinous adenocarcinoma | 1.35e-07 | 1 |
ovary epithelial cancer | 1.99e-07 | 1 |
cell type cancer | 4.08e-07 | 143 |