FFCP PHASE1:Hg19::chr1:246147829..246147864,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:246147829..246147864,- | |||
|description=CAGE_peak_at_chr1:246147829..246147864,- | |description=CAGE_peak_at_chr1:246147829..246147864,- | ||
|id=chr1:246147829..246147864,- | |id=chr1:246147829..246147864,- | ||
|ontology_enrichment_celltype=CL:0002622!3.89e-13!3;CL:0002504!1.38e-12!3;CL:1000279!1.38e-12!3;CL:1000280!1.38e-12!3;CL:1000487!4.02e-09!2;CL:0002583!2.49e-08!2;CL:0000945!3.44e-07!24;CL:0000826!3.44e-07!24 | |ontology_enrichment_celltype=CL:0002622!3.89e-13!3;CL:0002504!1.38e-12!3;CL:1000279!1.38e-12!3;CL:1000280!1.38e-12!3;CL:1000487!4.02e-09!2;CL:0002583!2.49e-08!2;CL:0000945!3.44e-07!24;CL:0000826!3.44e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002622;1.23e-45;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.05e-45,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3307!1.35e-09!2;DOID:17!2.42e-07!5;DOID:450!2.42e-07!5;DOID:66!2.42e-07!5;DOID:423!2.42e-07!5;DOID:0080000!2.42e-07!5;DOID:11722!2.42e-07!5 | |ontology_enrichment_disease=DOID:3307!1.35e-09!2;DOID:17!2.42e-07!5;DOID:450!2.42e-07!5;DOID:66!2.42e-07!5;DOID:423!2.42e-07!5;DOID:0080000!2.42e-07!5;DOID:11722!2.42e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3307;4.58e-32;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.92e-32,2 | |||
|ontology_enrichment_uberon=UBERON:0002367!3.86e-09!11;UBERON:0010147!3.86e-09!11;UBERON:0009846!3.86e-09!11;UBERON:0003353!3.86e-09!11;UBERON:0004902!3.86e-09!11;UBERON:0003820!3.86e-09!11;UBERON:0009847!3.86e-09!11;UBERON:0003937!2.40e-08!12;UBERON:0005399!2.40e-08!12;UBERON:0001155!3.14e-07!9;UBERON:0001046!3.85e-07!19;UBERON:0000162!4.24e-07!14;UBERON:0001353!4.24e-07!14;UBERON:0000163!4.24e-07!14;UBERON:0006866!4.24e-07!14;UBERON:0000164!4.24e-07!14;UBERON:0000931!4.24e-07!14 | |ontology_enrichment_uberon=UBERON:0002367!3.86e-09!11;UBERON:0010147!3.86e-09!11;UBERON:0009846!3.86e-09!11;UBERON:0003353!3.86e-09!11;UBERON:0004902!3.86e-09!11;UBERON:0003820!3.86e-09!11;UBERON:0009847!3.86e-09!11;UBERON:0003937!2.40e-08!12;UBERON:0005399!2.40e-08!12;UBERON:0001155!3.14e-07!9;UBERON:0001046!3.85e-07!19;UBERON:0000162!4.24e-07!14;UBERON:0001353!4.24e-07!14;UBERON:0000163!4.24e-07!14;UBERON:0006866!4.24e-07!14;UBERON:0000164!4.24e-07!14;UBERON:0000931!4.24e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;5.49e-13;11!UBERON:0010147;5.49e-13;11!UBERON:0003937;5.88e-12;12!UBERON:0005399;5.88e-12;12!UBERON:0005631;4.46e-07;10!UBERON:0000158;4.46e-07;10!UBERON:0003101;8.96e-07;22!UBERON:0000079;8.96e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,5.27e-13,11;UBERON:0010147,5.27e-13,11;UBERON:0009846,5.27e-13,11;UBERON:0003353,5.27e-13,11;UBERON:0004902,5.27e-13,11;UBERON:0003820,5.27e-13,11;UBERON:0009847,5.27e-13,11;UBERON:0003937,5.67e-12,12;UBERON:0005399,5.67e-12,12;UBERON:0000162,2.38e-10,14;UBERON:0001353,2.38e-10,14;UBERON:0000163,2.38e-10,14;UBERON:0006866,2.38e-10,14;UBERON:0000164,2.38e-10,14;UBERON:0000931,2.38e-10,14;UBERON:0004122,1.07e-09,15;UBERON:0001046,9.00e-08,19;UBERON:0003101,8.78e-07,22;UBERON:0000079,8.78e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,2.79142004129816,2.44003422072406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0,0,0,1.01254888506529,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,1.7222167224691,1.63882051206045,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,1.64722217841633,0.235624804691373,0,0,0,0,0,0,0.682499557039929,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62568523298871,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20591576906518,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754773679776773,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20684545892101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,3.8614456457388,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,2.79142004129816,2.44003422072406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0,0,0,1.01254888506529,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,1.7222167224691,1.63882051206045,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,1.64722217841633,0.235624804691373,0,0,0,0,0,0,0.682499557039929,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62568523298871,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20591576906518,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754773679776773,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20684545892101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,3.8614456457388,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr1:246147829..246147864,- | |short_description=p@chr1:246147829..246147864,- | ||
}} | }} |
Latest revision as of 06:03, 28 July 2015
Short description: | p@chr1:246147829..246147864, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246147829..246147864, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.05e-45 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 5.27e-13 | 11 |
male accessory sex gland | 5.27e-13 | 11 |
embryonic cloacal epithelium | 5.27e-13 | 11 |
epithelium of hindgut | 5.27e-13 | 11 |
urogenital sinus epithelium | 5.27e-13 | 11 |
prostate bud | 5.27e-13 | 11 |
prostate field | 5.27e-13 | 11 |
sex gland | 5.67e-12 | 12 |
male reproductive gland | 5.67e-12 | 12 |
cloaca | 2.38e-10 | 14 |
anal region | 2.38e-10 | 14 |
embryonic cloaca | 2.38e-10 | 14 |
terminal part of digestive tract | 2.38e-10 | 14 |
primitive urogenital sinus | 2.38e-10 | 14 |
proctodeum | 2.38e-10 | 14 |
genitourinary system | 1.07e-09 | 15 |
hindgut | 9.00e-08 | 19 |
male organism | 8.78e-07 | 22 |
male reproductive system | 8.78e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.92e-32 | 2 |