FFCP PHASE1:Hg19::chr10:51549546..51549557,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4477 | |EntrezGene=4477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7372 | |HGNC=7372 | ||
|TSSclassifier=strong | |||
|UniProt=P08118 | |UniProt=P08118 | ||
|association_with_transcript=0bp_to_ENST00000298239,ENST00000466268,ENST00000474170,ENST00000478719,ENST00000487536,NM_002443,NM_138634,uc001jiq.2,uc001jir.2_5end | |association_with_transcript=0bp_to_ENST00000298239,ENST00000466268,ENST00000474170,ENST00000478719,ENST00000487536,NM_002443,NM_138634,uc001jiq.2,uc001jir.2_5end | ||
|cluster_id=chr10:51549546..51549557,+ | |||
|coexpression_cluster_id=C81 | |coexpression_cluster_id=C81 | ||
|description=CAGE_peak_1_at_MSMB_5end | |description=CAGE_peak_1_at_MSMB_5end | ||
|id=chr10:51549546..51549557,+ | |id=chr10:51549546..51549557,+ | ||
|ontology_enrichment_celltype=CL:0002231!1.81e-07!3 | |ontology_enrichment_celltype=CL:0002231!1.81e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!8.86e-07!4;DOID:1612!8.86e-07!4 | |ontology_enrichment_disease=DOID:5093!8.86e-07!4;DOID:1612!8.86e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.35e-11;4!DOID:1612;1.35e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.30e-11,4;DOID:1612,1.30e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.77e-15!169;UBERON:0000925!6.77e-15!169;UBERON:0006595!6.77e-15!169;UBERON:0000065!2.89e-13!53;UBERON:0001004!4.10e-13!72;UBERON:0007023!3.21e-12!115;UBERON:0001007!3.98e-12!155;UBERON:0001555!3.98e-12!155;UBERON:0007026!3.98e-12!155;UBERON:0004921!2.34e-11!129;UBERON:0004185!2.34e-11!129;UBERON:0001737!3.12e-11!9;UBERON:0001557!6.60e-10!19;UBERON:0000077!4.38e-08!130;UBERON:0008947!6.23e-08!38;UBERON:0003258!6.23e-08!38;UBERON:0003101!3.12e-07!22;UBERON:0000079!3.12e-07!22;UBERON:0000161!3.18e-07!35;UBERON:0003127!8.55e-07!2 | |ontology_enrichment_uberon=UBERON:0004119!6.77e-15!169;UBERON:0000925!6.77e-15!169;UBERON:0006595!6.77e-15!169;UBERON:0000065!2.89e-13!53;UBERON:0001004!4.10e-13!72;UBERON:0007023!3.21e-12!115;UBERON:0001007!3.98e-12!155;UBERON:0001555!3.98e-12!155;UBERON:0007026!3.98e-12!155;UBERON:0004921!2.34e-11!129;UBERON:0004185!2.34e-11!129;UBERON:0001737!3.12e-11!9;UBERON:0001557!6.60e-10!19;UBERON:0000077!4.38e-08!130;UBERON:0008947!6.23e-08!38;UBERON:0003258!6.23e-08!38;UBERON:0003101!3.12e-07!22;UBERON:0000079!3.12e-07!22;UBERON:0000161!3.18e-07!35;UBERON:0003127!8.55e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.57e-11;2!UBERON:0000341;7.59e-11;2!UBERON:0002110;3.38e-07;3!UBERON:0000065;5.29e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.57e-11,2;UBERON:0000341,7.59e-11,2;UBERON:0007023,3.09e-09,114;UBERON:0000065,1.90e-08,54;UBERON:0001004,4.83e-08,74;UBERON:0004119,3.42e-07,160;UBERON:0000925,3.42e-07,160;UBERON:0006595,3.42e-07,160;UBERON:0002110,3.60e-07,3;UBERON:0006242,3.60e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58426764241994,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9649055510226,14.5942647556128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.601519410909855,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97637867556789,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64455864577565,2.69066094311149,3.06270509987002,6.57525575561074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83691564816031,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,114.567593244365,0,0,0,0,0,0,0,0,1.57829449019094,0,0,0,0,0,25.7823483474381,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,2.6932590476329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,1.94606641907346,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,31.4575861726526,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.581934098930517,0,6.55344148263544,0,0,0,2.34661659281764,0,16.4358805949301,0,0,0,0,0.288109595976299,0,3.77110455386873,0,0,0,0,0,0,0,0,0,0,0,0,2.79550600698588,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15424157650247,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0959384589357,11.0043013569766,64.6212926341625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,7.20513673456923,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0.11796972334774,0.733714394086716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.2006830927542,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.263091094251396,0.118193840883968,0,181.946989227491,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,36.5693254997236,0,0,0.423387050190929,0,0,0,0,0,4.63288114932624,0,0,0,12.6284858195376,0.233939463462106,0,0,0,0,0,0.308696632431779,0.437119121007915,396.477480832764,0.735444965261716,0,0,0,0,0,0,0,0,0.892769693028288,0,0,64.99993855394,1.83491713361816,0,0,0,0,70.8895966290637,0,0,0,0,0,0,0,0,0,0,0,1.87574891109325,0,0,161.631358280944,10.7128994158683,0,0.186224142887574,0,0,0.202117188958219,0.435433495793923,0,1.68380132536469,1127.32962436209,290.41249126467,0,0,0,0,14.0784565442073,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58426764241994,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9649055510226,14.5942647556128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.601519410909855,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97637867556789,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64455864577565,2.69066094311149,3.06270509987002,6.57525575561074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83691564816031,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,114.567593244365,0,0,0,0,0,0,0,0,1.57829449019094,0,0,0,0,0,25.7823483474381,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,2.6932590476329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,1.94606641907346,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,31.4575861726526,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.581934098930517,0,6.55344148263544,0,0,0,2.34661659281764,0,16.4358805949301,0,0,0,0,0.288109595976299,0,3.77110455386873,0,0,0,0,0,0,0,0,0,0,0,0,2.79550600698588,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15424157650247,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0959384589357,11.0043013569766,64.6212926341625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,7.20513673456923,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0.11796972334774,0.733714394086716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.2006830927542,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.263091094251396,0.118193840883968,0,181.946989227491,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,36.5693254997236,0,0,0.423387050190929,0,0,0,0,0,4.63288114932624,0,0,0,12.6284858195376,0.233939463462106,0,0,0,0,0,0.308696632431779,0.437119121007915,396.477480832764,0.735444965261716,0,0,0,0,0,0,0,0,0.892769693028288,0,0,64.99993855394,1.83491713361816,0,0,0,0,70.8895966290637,0,0,0,0,0,0,0,0,0,0,0,1.87574891109325,0,0,161.631358280944,10.7128994158683,0,0.186224142887574,0,0,0.202117188958219,0.435433495793923,0,1.68380132536469,1127.32962436209,290.41249126467,0,0,0,0,14.0784565442073,0,0,0,0.402547587182052,0 | ||
|short_description=p1@MSMB | |short_description=p1@MSMB | ||
}} | }} |
Latest revision as of 10:31, 18 September 2015
Short description: | p1@MSMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MSMB_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000298239, ENST00000466268, ENST00000474170, ENST00000478719, ENST00000487536, NM_002443, NM_138634, uc001jiq.2, uc001jir.2_5end |
EntrezGene: | MSMB |
HGNC: | 7372 |
UniProt: | P08118 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.57e-11 | 2 |
throat | 7.59e-11 | 2 |
adult organism | 3.09e-09 | 114 |
respiratory tract | 1.90e-08 | 54 |
respiratory system | 4.83e-08 | 74 |
endoderm-derived structure | 3.42e-07 | 160 |
endoderm | 3.42e-07 | 160 |
presumptive endoderm | 3.42e-07 | 160 |
gallbladder | 3.60e-07 | 3 |
gall bladder primordium | 3.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.30e-11 | 4 |
breast cancer | 1.30e-11 | 4 |