FFCP PHASE1:Hg19::chr10:96443514..96443527,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1562 | |EntrezGene=1562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2620 | |HGNC=2620 | ||
|TSSclassifier=strong | |||
|UniProt=P33260 | |UniProt=P33260 | ||
|association_with_transcript=136bp_to_ENST00000285979_5end | |association_with_transcript=136bp_to_ENST00000285979_5end | ||
|cluster_id=chr10:96443514..96443527,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_4_at_CYP2C18_5end | |description=CAGE_peak_4_at_CYP2C18_5end | ||
|id=chr10:96443514..96443527,+ | |id=chr10:96443514..96443527,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,7.26e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!2.46e-08!1;DOID:3149!2.46e-08!1 | |ontology_enrichment_disease=DOID:3151!2.46e-08!1;DOID:3149!2.46e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.96e-12!35;UBERON:0004921!1.20e-09!129;UBERON:0004185!1.20e-09!129;UBERON:0000160!5.07e-09!27;UBERON:0004119!5.41e-09!169;UBERON:0000925!5.41e-09!169;UBERON:0006595!5.41e-09!169;UBERON:0001007!8.79e-09!155;UBERON:0001555!8.79e-09!155;UBERON:0007026!8.79e-09!155;UBERON:0002372!2.64e-08!1;UBERON:0001961!2.64e-08!1;UBERON:0001744!2.64e-08!1;UBERON:0001735!2.64e-08!1;UBERON:0002108!4.88e-08!14 | |ontology_enrichment_uberon=UBERON:0005409!4.96e-12!35;UBERON:0004921!1.20e-09!129;UBERON:0004185!1.20e-09!129;UBERON:0000160!5.07e-09!27;UBERON:0004119!5.41e-09!169;UBERON:0000925!5.41e-09!169;UBERON:0006595!5.41e-09!169;UBERON:0001007!8.79e-09!155;UBERON:0001555!8.79e-09!155;UBERON:0007026!8.79e-09!155;UBERON:0002372!2.64e-08!1;UBERON:0001961!2.64e-08!1;UBERON:0001744!2.64e-08!1;UBERON:0001735!2.64e-08!1;UBERON:0002108!4.88e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;6.81e-42;22!UBERON:0002108;1.09e-36;4!UBERON:0000160;8.29e-28;17!UBERON:0004921;2.82e-24;33!UBERON:0000945;1.12e-16;5!UBERON:0010039;1.12e-16;5!UBERON:0001555;1.09e-10;54!UBERON:0001155;8.84e-10;9!UBERON:0000059;3.62e-08;11!UBERON:0000922;5.54e-08;49!UBERON:0002114;5.54e-08;2!UBERON:0001007;8.55e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.92e-37,25;UBERON:0002108,1.24e-36,4;UBERON:0000160,7.42e-28,17;UBERON:0000945,8.06e-11,8;UBERON:0010039,8.06e-11,8;UBERON:0004921,2.43e-10,118;UBERON:0001155,7.74e-10,9;UBERON:0001007,2.39e-08,145;UBERON:0001555,2.39e-08,145;UBERON:0007026,2.39e-08,145;UBERON:0000059,3.25e-08,11;UBERON:0002114,5.93e-08,2;UBERON:0004119,1.59e-07,160;UBERON:0000925,1.59e-07,160;UBERON:0006595,1.59e-07,160 | |||
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|short_description=p4@CYP2C18 | |short_description=p4@CYP2C18 | ||
}} | }} |
Latest revision as of 02:32, 20 September 2015
Short description: | p4@CYP2C18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CYP2C18_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 136bp_to_ENST00000285979_5end |
EntrezGene: | CYP2C18 |
HGNC: | 2620 |
UniProt: | P33260 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.92e-37 | 25 |
small intestine | 1.24e-36 | 4 |
intestine | 7.42e-28 | 17 |
stomach | 8.06e-11 | 8 |
food storage organ | 8.06e-11 | 8 |
subdivision of digestive tract | 2.43e-10 | 118 |
colon | 7.74e-10 | 9 |
digestive system | 2.39e-08 | 145 |
digestive tract | 2.39e-08 | 145 |
primitive gut | 2.39e-08 | 145 |
large intestine | 3.25e-08 | 11 |
duodenum | 5.93e-08 | 2 |
endoderm-derived structure | 1.59e-07 | 160 |
endoderm | 1.59e-07 | 160 |
presumptive endoderm | 1.59e-07 | 160 |