FFCP PHASE1:Hg19::chr12:6347064..6347085,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6347064..6347085,+ | |||
|coexpression_cluster_id=C2228 | |coexpression_cluster_id=C2228 | ||
|description=CAGE_peak_at_chr12:6347064..6347085,+ | |description=CAGE_peak_at_chr12:6347064..6347085,+ | ||
|id=chr12:6347064..6347085,+ | |id=chr12:6347064..6347085,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.75e-15!254;CL:0000220!9.75e-08!246;CL:0002321!1.15e-07!248 | |ontology_enrichment_celltype=CL:0000066!2.75e-15!254;CL:0000220!9.75e-08!246;CL:0002321!1.15e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:1000413;7.12e-11;9!CL:0000071;5.15e-09;18!CL:0002139;6.88e-09;24!CL:0000115;6.39e-08;36!CL:0002544;3.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,3.37e-10,9;CL:0002078,9.88e-10,45;CL:0002139,1.01e-08,24;CL:0000071,1.03e-08,18;CL:0002546,1.03e-08,18;CL:0000115,3.31e-08,36;CL:0000066,5.63e-07,253;CL:0002544,7.19e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.15e-09;18 | |||
|ontology_enrichment_disease=DOID:305!1.06e-07!106 | |ontology_enrichment_disease=DOID:305!1.06e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!4.22e-13!625;UBERON:0000480!6.69e-13!626;UBERON:0000477!1.15e-12!286;UBERON:0000468!1.29e-12!659;UBERON:0000922!5.30e-12!612;UBERON:0004111!1.10e-11!241;UBERON:0002050!7.67e-11!605;UBERON:0005423!7.67e-11!605;UBERON:0000923!1.56e-10!604;UBERON:0005291!1.56e-10!604;UBERON:0006598!1.56e-10!604;UBERON:0002532!1.56e-10!604;UBERON:0000062!2.32e-08!511;UBERON:0001004!2.75e-08!72;UBERON:0004119!1.20e-07!169;UBERON:0000925!1.20e-07!169;UBERON:0006595!1.20e-07!169;UBERON:0000064!1.21e-07!219;UBERON:0000481!1.51e-07!347;UBERON:0000025!1.72e-07!194;UBERON:0000483!2.44e-07!309;UBERON:0000119!2.52e-07!312;UBERON:0001007!5.69e-07!155;UBERON:0001555!5.69e-07!155;UBERON:0007026!5.69e-07!155;UBERON:0001981!6.34e-07!60;UBERON:0007500!6.34e-07!60;UBERON:0004537!6.34e-07!60;UBERON:0006965!6.34e-07!60 | |ontology_enrichment_uberon=UBERON:0000467!4.22e-13!625;UBERON:0000480!6.69e-13!626;UBERON:0000477!1.15e-12!286;UBERON:0000468!1.29e-12!659;UBERON:0000922!5.30e-12!612;UBERON:0004111!1.10e-11!241;UBERON:0002050!7.67e-11!605;UBERON:0005423!7.67e-11!605;UBERON:0000923!1.56e-10!604;UBERON:0005291!1.56e-10!604;UBERON:0006598!1.56e-10!604;UBERON:0002532!1.56e-10!604;UBERON:0000062!2.32e-08!511;UBERON:0001004!2.75e-08!72;UBERON:0004119!1.20e-07!169;UBERON:0000925!1.20e-07!169;UBERON:0006595!1.20e-07!169;UBERON:0000064!1.21e-07!219;UBERON:0000481!1.51e-07!347;UBERON:0000025!1.72e-07!194;UBERON:0000483!2.44e-07!309;UBERON:0000119!2.52e-07!312;UBERON:0001007!5.69e-07!155;UBERON:0001555!5.69e-07!155;UBERON:0007026!5.69e-07!155;UBERON:0001981!6.34e-07!60;UBERON:0007500!6.34e-07!60;UBERON:0004537!6.34e-07!60;UBERON:0006965!6.34e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0003915;7.12e-11;9!UBERON:0004700;7.12e-11;9!UBERON:0001917;7.12e-11;9!UBERON:0000487;5.43e-10;22!UBERON:0006914;7.89e-10;25!UBERON:0003135;2.74e-09;11!UBERON:0004638;5.15e-09;18!UBERON:0001986;5.15e-09;18!UBERON:0004852;5.15e-09;18!UBERON:0001637;9.01e-07;42!UBERON:0003509;9.01e-07;42!UBERON:0004572;9.01e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,3.37e-10,9;UBERON:0004700,3.37e-10,9;UBERON:0001917,3.37e-10,9;UBERON:0000487,1.13e-09,22;UBERON:0003135,1.42e-09,11;UBERON:0006914,1.70e-09,25;UBERON:0007500,1.96e-09,59;UBERON:0001981,1.96e-09,59;UBERON:0004537,1.96e-09,59;UBERON:0006965,1.96e-09,59;UBERON:0000055,3.11e-09,68;UBERON:0004638,1.03e-08,18;UBERON:0001986,1.03e-08,18;UBERON:0004852,1.03e-08,18;UBERON:0004111,1.52e-08,240;UBERON:0003914,2.31e-08,117;UBERON:0002049,3.15e-07,78;UBERON:0007798,3.15e-07,78;UBERON:0001637,6.25e-07,42;UBERON:0003509,6.25e-07,42;UBERON:0004572,6.25e-07,42 | |||
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| ||
|short_description=p@chr12:6347064..6347085,+ | |short_description=p@chr12:6347064..6347085,+ | ||
}} | }} |
Latest revision as of 11:12, 24 July 2015
Short description: | p@chr12:6347064..6347085, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6347064..6347085, + |
Coexpression cluster: | C2228_Monocytederived_seminal_leiomyoma_Renal_Wilms_Endothelial_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 3.37e-10 | 9 |
meso-epithelial cell | 9.88e-10 | 45 |
endothelial cell of vascular tree | 1.01e-08 | 24 |
blood vessel endothelial cell | 1.03e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.03e-08 | 18 |
endothelial cell | 3.31e-08 | 36 |
epithelial cell | 5.63e-07 | 253 |
aortic endothelial cell | 7.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 3.37e-10 | 9 |
arterial system endothelium | 3.37e-10 | 9 |
endothelium of artery | 3.37e-10 | 9 |
simple squamous epithelium | 1.13e-09 | 22 |
male reproductive organ | 1.42e-09 | 11 |
squamous epithelium | 1.70e-09 | 25 |
epithelial tube open at both ends | 1.96e-09 | 59 |
blood vessel | 1.96e-09 | 59 |
blood vasculature | 1.96e-09 | 59 |
vascular cord | 1.96e-09 | 59 |
vessel | 3.11e-09 | 68 |
blood vessel endothelium | 1.03e-08 | 18 |
endothelium | 1.03e-08 | 18 |
cardiovascular system endothelium | 1.03e-08 | 18 |
anatomical conduit | 1.52e-08 | 240 |
epithelial tube | 2.31e-08 | 117 |
vasculature | 3.15e-07 | 78 |
vascular system | 3.15e-07 | 78 |
artery | 6.25e-07 | 42 |
arterial blood vessel | 6.25e-07 | 42 |
arterial system | 6.25e-07 | 42 |