FFCP PHASE1:Hg19::chr12:6881678..6881707,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3902 | |EntrezGene=3902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6476 | |HGNC=6476 | ||
|TSSclassifier=strong | |||
|UniProt=P18627,Q7Z643 | |UniProt=P18627,Q7Z643 | ||
|association_with_transcript=0bp_to_ENST00000203629,ENST00000441671,ENST00000538079,uc001qqu.2_5end | |association_with_transcript=0bp_to_ENST00000203629,ENST00000441671,ENST00000538079,uc001qqu.2_5end | ||
|cluster_id=chr12:6881678..6881707,+ | |||
|coexpression_cluster_id=C2233 | |coexpression_cluster_id=C2233 | ||
|description=CAGE_peak_1_at_LAG3_5end | |description=CAGE_peak_1_at_LAG3_5end | ||
|id=chr12:6881678..6881707,+ | |id=chr12:6881678..6881707,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.23e-15!18;CL:0000789!1.23e-15!18;CL:0002420!1.23e-15!18;CL:0002419!1.23e-15!18;CL:0000790!1.23e-15!18;CL:0000738!4.97e-12!140;CL:0000625!2.80e-11!11;CL:0000084!1.30e-10!25;CL:0000827!1.30e-10!25;CL:0002087!4.59e-10!119;CL:0000542!5.43e-09!53;CL:0000051!5.43e-09!53;CL:0000838!1.07e-08!52;CL:0002031!1.13e-07!124;CL:0000037!1.60e-07!172;CL:0000566!1.60e-07!172 | |ontology_enrichment_celltype=CL:0000791!1.23e-15!18;CL:0000789!1.23e-15!18;CL:0002420!1.23e-15!18;CL:0002419!1.23e-15!18;CL:0000790!1.23e-15!18;CL:0000738!4.97e-12!140;CL:0000625!2.80e-11!11;CL:0000084!1.30e-10!25;CL:0000827!1.30e-10!25;CL:0002087!4.59e-10!119;CL:0000542!5.43e-09!53;CL:0000051!5.43e-09!53;CL:0000838!1.07e-08!52;CL:0002031!1.13e-07!124;CL:0000037!1.60e-07!172;CL:0000566!1.60e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.11e-21;18!CL:0000789;1.11e-21;18!CL:0002419;1.11e-21;18!CL:0000625;1.12e-16;11!CL:0000084;4.47e-16;25!CL:0000542;8.83e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.03e-21,18;CL:0000789,1.03e-21,18;CL:0002420,1.03e-21,18;CL:0002419,1.03e-21,18;CL:0000790,1.03e-21,18;CL:0000625,1.15e-16,11;CL:0000084,4.25e-16,25;CL:0000827,4.25e-16,25;CL:0000838,2.48e-14,52;CL:0000542,6.81e-14,53;CL:0000051,6.81e-14,53;CL:0000738,2.56e-11,136;CL:0000037,4.05e-08,168;CL:0002087,4.14e-08,115;CL:0000988,4.56e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.11e-21;18!CL:0000051;8.83e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.56e-31!115;UBERON:0000178!2.67e-07!15;UBERON:0000179!2.67e-07!15;UBERON:0000463!2.67e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!5.56e-31!115;UBERON:0000178!2.67e-07!15;UBERON:0000179!2.67e-07!15;UBERON:0000463!2.67e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.52e-11;15!UBERON:0000179;2.52e-11;15!UBERON:0000463;2.52e-11;15!UBERON:0002390;6.53e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.51e-20,114;UBERON:0000178,2.26e-11,15;UBERON:0000179,2.26e-11,15;UBERON:0000463,2.26e-11,15;UBERON:0004177,1.02e-07,7;UBERON:0005057,1.02e-07,7 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,24.9871836795801,18.6368338051377,23.9280775193585,7.08055698328027,22.2621050896383,1.23852898652861,0,0,0,0,0,2.05520307534393,1.66198622559563,10.2277668209772,2.38711957787437,17.0175760422342,19.4336199611388,20.0908942754665,0,0.377875943688809,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0.768482119587302,0.236482229888585,0.689491361473237,0.645484683583826,0,0.188242339542605,0.818718450173537,0,0,1.60464513538047,0,0,0,0.426224750532694,0,1.13477044938228,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,2.20966581592539,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,5.28685314316103,2.24203425192614,1.05353633910031,5.70458333330116,4.71612915298998,4.31763147898969,4.34684888015763,0.32592226663359,0,0,114.307128764188,7.9543595018206,13.2920336750173,16.519035689666,157.680414582306,169.857507913201,13.1550323682941,5.80335037350282,5.506258628966,0.741432815810302,0.267540828089713,2.09071047609954,12.010790325942,7.2811893784365,6.52892146416997,15.1811815211702,16.8839669591771,12.370585623272,19.0090408889675,21.231091789966,26.7492017312734,29.983374372563,19.6525119196534,18.064815932263,50.2000790629584,40.6509097590931,25.0546218717242,0,0,0,0,0.50133791063589,0.579386075843295,0,4.37971383272372,0,0,0.087834785693126,7.13835961462534,0,0,0.649094787309367,0.522389211897802,0.398873881556595,0.238490624305342,1.14398982156026,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.662648841607426,1.51052125730374,0.725627385107593,0.504641701751257,0.36497735907583,3.12899064659632,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,3.80265104465493,2.94848165003288,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86156681609409,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.8503307063493,32.3130446731161,35.3629222769608,11.6792163014571,0,0,0,0,0,2.99602809578873,2.99161459204025,4.14415513436035,1.10422342547226,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.391602314925481,0,11.3722414367588,1.72571360654893,22.1993320231164,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94596855909067,0,0,0,0,0,0,0,0,0,0.322260734604821,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,1.77449884830381,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0.844430541190656,0,0,0.349934720244983,0,0,0,4.14232723417828,0,0,0,0,9.64150457541122,6.117097657139,9.1143549947866,13.579211201094,8.22724546172388,7.13320642311989,5.94034580961926,7.13812658664843,0.534120355637366,0,0,0.557409525377156,0,0,0,0,0,0,0.324621940274555,1.12318871245384,0,0,0,3.72441911163527,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.61158997199083,0.242721043499027,62.0739650425555,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0,0,17.7345342827515,3.58646378851925,52.7702278664492,0,0,12.431565351568,0,0,0,0,3.05794557474494,4.7896618469388,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0.219385397153973,0,0,10.234384381005,0,0,0,0,1.91400695839152,2.65633020865401,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,6.96683351754953,6.89969003126046,3.66618086960175,0,0,0,0.808813595768125,0,0,0,0,0.242780379534093,2.36750641709634,4.83962864194656,0.91821828489147,6.63459086099124,0,0,0,0,0,0,0,0,0,0,0,5.06707337901887,1.54787429224455,0,0,0,3.10364852762942,0,0.90392296312213,0,0,0.126621591911757,0,0,4.0556069000477,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.39641200636127,0.229160424011684,1.43574604915363,0,1.28767814440971,0.669514372325618,0.134366944973453,0,0,0,0.0824158583811665,0.13480708770837,0,0,0.795229689809303,0.272406812223151,0.482259445395058,0.825236619583403,1.24632101408756,6.97419063809651,0,0.425246896606173,0,0.945668487590378,0,0,0,0,5.71756261098694,1.32418394073086,3.81402806482125,0,0,0.326587360109409,0,0,0,0,6.30174604815755,6.62534444561107,0.517131825446202,0,0,0,5.87330769122321,0.471612915298998,7.04206394090232,9.42715441442707,46.241121864119,0.121792598380896,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0.3755727921195,6.30750115259078,0.554645257684261,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0.521745061811734,0,0,0,0,0,0,1.99047944349308,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0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| ||
|short_description=p1@LAG3 | |short_description=p1@LAG3 | ||
}} | }} |
Latest revision as of 03:12, 20 September 2015
Short description: | p1@LAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LAG3_5end |
Coexpression cluster: | C2233_CD4_NK_spleen_adult_lymphangiectasia_appendix_CD8 |
Association with transcript: | 0bp_to_ENST00000203629, ENST00000441671, ENST00000538079, uc001qqu.2_5end |
EntrezGene: | LAG3 |
HGNC: | 6476 |
UniProt: | P18627Q7Z643 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.03e-21 | 18 |
alpha-beta T cell | 1.03e-21 | 18 |
immature T cell | 1.03e-21 | 18 |
mature T cell | 1.03e-21 | 18 |
immature alpha-beta T cell | 1.03e-21 | 18 |
CD8-positive, alpha-beta T cell | 1.15e-16 | 11 |
T cell | 4.25e-16 | 25 |
pro-T cell | 4.25e-16 | 25 |
lymphoid lineage restricted progenitor cell | 2.48e-14 | 52 |
lymphocyte | 6.81e-14 | 53 |
common lymphoid progenitor | 6.81e-14 | 53 |
leukocyte | 2.56e-11 | 136 |
hematopoietic stem cell | 4.05e-08 | 168 |
nongranular leukocyte | 4.14e-08 | 115 |
hematopoietic cell | 4.56e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.51e-20 | 114 |
blood | 2.26e-11 | 15 |
haemolymphatic fluid | 2.26e-11 | 15 |
organism substance | 2.26e-11 | 15 |
hemopoietic organ | 1.02e-07 | 7 |
immune organ | 1.02e-07 | 7 |