FFCP PHASE1:Hg19::chr12:91451681..91451706,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11081 | |EntrezGene=11081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6309 | |HGNC=6309 | ||
|TSSclassifier=strong | |||
|UniProt=O60938 | |UniProt=O60938 | ||
|association_with_transcript=53bp_to_ENST00000266719_5end | |association_with_transcript=53bp_to_ENST00000266719_5end | ||
|cluster_id=chr12:91451681..91451706,- | |||
|coexpression_cluster_id=C1691 | |coexpression_cluster_id=C1691 | ||
|description=CAGE_peak_1_at_KERA_5end | |description=CAGE_peak_1_at_KERA_5end | ||
|id=chr12:91451681..91451706,- | |id=chr12:91451681..91451706,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.75e-12;1!UBERON:0000358;2.20e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!3.17e-10!2;UBERON:0003127!3.47e-10!2;UBERON:0007023!5.32e-10!115;UBERON:0001829!1.01e-09!2;UBERON:0004921!1.31e-09!129;UBERON:0004185!1.31e-09!129;UBERON:0001007!3.56e-08!155;UBERON:0001555!3.56e-08!155;UBERON:0007026!3.56e-08!155;UBERON:0001041!1.13e-07!98;UBERON:0001004!2.09e-07!72;UBERON:0004119!4.12e-07!169;UBERON:0000925!4.12e-07!169;UBERON:0006595!4.12e-07!169;UBERON:0001723!4.47e-07!3;UBERON:0001033!4.47e-07!3;UBERON:0010056!4.47e-07!3;UBERON:0001042!5.09e-07!10;UBERON:0009145!5.09e-07!10;UBERON:0005181!9.37e-07!35 | |ontology_enrichment_uberon=UBERON:0000341!3.17e-10!2;UBERON:0003127!3.47e-10!2;UBERON:0007023!5.32e-10!115;UBERON:0001829!1.01e-09!2;UBERON:0004921!1.31e-09!129;UBERON:0004185!1.31e-09!129;UBERON:0001007!3.56e-08!155;UBERON:0001555!3.56e-08!155;UBERON:0007026!3.56e-08!155;UBERON:0001041!1.13e-07!98;UBERON:0001004!2.09e-07!72;UBERON:0004119!4.12e-07!169;UBERON:0000925!4.12e-07!169;UBERON:0006595!4.12e-07!169;UBERON:0001723!4.47e-07!3;UBERON:0001033!4.47e-07!3;UBERON:0010056!4.47e-07!3;UBERON:0001042!5.09e-07!10;UBERON:0009145!5.09e-07!10;UBERON:0005181!9.37e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;5.17e-23;2!UBERON:0001723;1.18e-15;3!UBERON:0001033;1.18e-15;3!UBERON:0000922;6.80e-14;49!UBERON:0007029;1.57e-12;1!UBERON:0000989;1.75e-12;1!UBERON:0008811;1.75e-12;1!UBERON:0002426;1.96e-12;1!UBERON:0003831;1.96e-12;1!UBERON:0003898;1.96e-12;1!UBERON:0004830;1.96e-12;1!UBERON:0003830;1.96e-12;1!UBERON:0005175;1.96e-12;1!UBERON:0001774;1.96e-12;1!UBERON:0001103;1.96e-12;1!UBERON:0000974;2.66e-08;6!UBERON:0003127;4.83e-07;2!UBERON:0005090;7.61e-07;2!UBERON:0001630;7.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.37e-23,2;UBERON:0001723,9.80e-16,3;UBERON:0001033,9.80e-16,3;UBERON:0010056,9.80e-16,3;UBERON:0007029,1.57e-12,1;UBERON:0000989,1.75e-12,1;UBERON:0008811,1.75e-12,1;UBERON:0006258,1.75e-12,1;UBERON:0005876,1.75e-12,1;UBERON:0004874,1.75e-12,1;UBERON:0002426,1.96e-12,1;UBERON:0003831,1.96e-12,1;UBERON:0003898,1.96e-12,1;UBERON:0004830,1.96e-12,1;UBERON:0003830,1.96e-12,1;UBERON:0005175,1.96e-12,1;UBERON:0001774,1.96e-12,1;UBERON:0001103,1.96e-12,1;UBERON:0010084,1.96e-12,1;UBERON:0003127,4.83e-07,2;UBERON:0005090,7.61e-07,2;UBERON:0001630,7.61e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0.104421949505455,0,10.4335094148843,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,76.833451865381,0,0,0,0,0,0,0.39961921916426,0,43.7529797353798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,1.25763444079733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0.548257766857182,15.8787577084574,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923965261706223,44.0729483908516,16.5141737640107,0,0,5.11356390343545,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,48.5936411555009,0,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,24.0445075778378,0.0645889098360061,0,0,0,1.0105859447911,1.95945073107265,20.8762313662021,0.134704106029175,0.717222053926764,59.5462038217364,0,0,0,0,7.03922827210363,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0.104421949505455,0,10.4335094148843,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,76.833451865381,0,0,0,0,0,0,0.39961921916426,0,43.7529797353798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,1.25763444079733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0.548257766857182,15.8787577084574,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923965261706223,44.0729483908516,16.5141737640107,0,0,5.11356390343545,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,48.5936411555009,0,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,24.0445075778378,0.0645889098360061,0,0,0,1.0105859447911,1.95945073107265,20.8762313662021,0.134704106029175,0.717222053926764,59.5462038217364,0,0,0,0,7.03922827210363,0,0,0,0.201273793591026,0 | ||
|short_description=p1@KERA | |short_description=p1@KERA | ||
}} | }} |
Latest revision as of 20:50, 15 September 2015
Short description: | p1@KERA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KERA_5end |
Coexpression cluster: | C1691_eye_trachea_synovial_gastric_skeletal_throat_tongue |
Association with transcript: | 53bp_to_ENST00000266719_5end |
EntrezGene: | KERA |
HGNC: | 6309 |
UniProt: | O60938 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 4.37e-23 | 2 |
tongue | 9.80e-16 | 3 |
gustatory system | 9.80e-16 | 3 |
future tongue | 9.80e-16 | 3 |
surface | 1.57e-12 | 1 |
penis | 1.75e-12 | 1 |
intromittent organ | 1.75e-12 | 1 |
lateral plate mesenchyme | 1.75e-12 | 1 |
undifferentiated genital tubercle | 1.75e-12 | 1 |
somatopleure | 1.75e-12 | 1 |
chest muscle | 1.96e-12 | 1 |
respiratory system muscle | 1.96e-12 | 1 |
skeletal muscle of trunk | 1.96e-12 | 1 |
respiratory system skeletal muscle | 1.96e-12 | 1 |
thoracic segment muscle | 1.96e-12 | 1 |
chest organ | 1.96e-12 | 1 |
muscle of trunk | 1.96e-12 | 1 |
diaphragm | 1.96e-12 | 1 |
future diaphragm | 1.96e-12 | 1 |
open tracheal system trachea | 4.83e-07 | 2 |
muscle structure | 7.61e-07 | 2 |
muscle organ | 7.61e-07 | 2 |