FFCP PHASE1:Hg19::chr18:28682130..28682137,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:28682130..28682137,-
|short_description=p7@DSC2
|description=CAGE_peak_7_at_DSC2_5end
|association_with_transcript=-108bp_to_ENST00000399347_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1824 | |EntrezGene=1824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3036 | |HGNC=3036 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7U2 | |UniProt=F8W7U2 | ||
|association_with_transcript=-108bp_to_ENST00000399347_5end | |||
|cluster_id=chr18:28682130..28682137,- | |||
|coexpression_cluster_id=C629 | |||
|description=CAGE_peak_7_at_DSC2_5end | |||
|id=chr18:28682130..28682137,- | |||
|ontology_enrichment_celltype=CL:0002076!3.48e-10!43;CL:0000066!9.70e-10!254;CL:0000223!1.00e-08!59;CL:0002251!9.87e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.47e-09;42!CL:0000622;1.67e-08;5!CL:0000039;2.79e-08;7!CL:0000586;2.79e-08;7!CL:0002621;5.27e-08;3!CL:0000154;4.58e-07;6!CL:0000150;9.97e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.36e-10,42;CL:0000622,1.46e-08,5;CL:0000223,1.60e-08,58;CL:0000039,2.71e-08,7;CL:0000586,2.71e-08,7;CL:0002621,3.25e-08,3;CL:0000066,2.82e-07,253;CL:0000154,4.11e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.12e-11!511;UBERON:0004119!5.50e-10!169;UBERON:0000925!5.50e-10!169;UBERON:0006595!5.50e-10!169;UBERON:0000922!1.39e-08!612;UBERON:0000468!2.96e-08!659;UBERON:0007023!4.26e-08!115;UBERON:0001007!3.23e-07!155;UBERON:0001555!3.23e-07!155;UBERON:0007026!3.23e-07!155;UBERON:0005631!5.40e-07!14;UBERON:0000158!5.40e-07!14;UBERON:0000064!5.49e-07!219;UBERON:0000480!7.70e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.96e-11;33!UBERON:0001041;8.67e-10;14!UBERON:0001555;2.38e-08;54!UBERON:0001949;5.27e-08;3!UBERON:0000165;5.62e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.58e-12,160;UBERON:0000925,7.58e-12,160;UBERON:0006595,7.58e-12,160;UBERON:0001007,6.23e-09,145;UBERON:0001555,6.23e-09,145;UBERON:0007026,6.23e-09,145;UBERON:0001949,3.25e-08,3;UBERON:0005631,8.37e-08,14;UBERON:0000158,8.37e-08,14;UBERON:0000166,9.25e-08,22;UBERON:0004921,1.55e-07,118;UBERON:0000161,3.12e-07,36;UBERON:0005795,3.95e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.74753097704138,0.527533956456907,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0.217010870715852,0.671746422719773,0.647787332037959,1.28787783817093,0,0,0,0.232429036905685,0,0,0.863077176966451,0.512321413058201,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0.641858054152187,0,0.329851300186716,0.997318288108159,0,0.580418477257168,0,0,0.502497330513487,0,0,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.472674085820339,0,0.702678285545008,0.130979075497713,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,2.18047026071267,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,2.45471508531751,3.44165514466805,0.365921118388786,0.927708378250397,0.929551542956147,1.24393266018445,2.01856680700503,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,3.07300799144152,0,0.603173834469785,1.20364978706088,0,0,0,0.34779121492523,0.70445216541493,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0.93733833986777,1.34385702559088,0.992425680696705,0.358234090811393,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,2.24702107184155,0,1.65766205374414,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,1.5156378572313,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,2.40607764363942,1.56537681191024,0,0,0,0,0.616122696835318,0.784349769176855,0,0.633309773357254,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,1.01950509218015,0,0.671624264166535,0,0,0,0.984043937099117,0.325378394664303,0.309123034943167,0,0.082509499920588,2.29706215198469,2.60024098414608,0,0,0,0,0,0,0,0,0.0890320356467374,1.15699440752685,0.192190067365106,1.14851441245126,2.023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.294747123039363,0,0,0,0,0,0,0.577332676353072,0,0,0.282431402330337,0.43050537267123,0,0,0.689170200620878,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62310970137278,0,0,0,0,0.50787533340481,0,0.201799707191048,0,0,0.614481528616916,0.671028323677248,0.834245708559542,0,0,0,0,0,0,0.37428108081644,0.73254089635947,0,0,0,11.2209907826714,0.593929361665277,8.6004996587785,0,0.281338832821026,0.445234820091624,0,0,0.398495976502139,1.93398740871803,1.0077309914171,0.409074730008619,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.262379999988587,0.724999575434793,0.227586896570999,1.77977555204936,3.54581522651905,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0.32681539055697,4.46155981691531,4.92481654424301,0,5.53353370531344,0.359030577639089,2.17294743844016,3.19001159731919,0.0915975934018623,0.533034776018635,0,0,1.16348177330109,0.225595660617181,0.392125068635479,0.167821586975843,0.189753732724185,0,1.68798451622422,0,0.141353071433941,0,2.98578579323551,0.176915129006678,7.33236173920351,0,0.123563938946503,0.104421949505455,0.404406797884062,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0,3.62972148145992,0.61214552326098,0.884612114798832,0,0.933193722575224,0,0.330991955875499,0,0,0.569219092059585,0,1.04135843001079,1.46988596121566,0.261177619741208,0.52418000472609,0,0,0,0,19.203825264707,0,1.12990370390266,0.137041924646751,0,0.189932387867636,0,1.44285876452761,0.640358984218058,0,1.44090417154106,1.94712213482057,0,0,0.372757606696298,2.35694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0.717873024576814,2.1964690054889,0.858452096273142,0.89268582976749,0.873385142327441,0,0,0.315132729228895,1.07140615895516,0.539228350833479,0.196854963029498,0,0,0,0.643012593860077,0.412618309791701,0.415440338029185,0,0,0.182248669974074,6.37325906438606,0.315222829196793,0.734364233889974,1.47840471127169,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.258565912723101,0,0.171086837884329,0.704815022316672,0.213574825135389,0,1.65695622138878,1.48849806543585,0.197611631897944,0,0.638341257770182,0,0,0.306345576763462,0.327872630709804,0.628216385000937,0,0.366078794705889,0,0,0.110929051536852,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,1.28664954824955,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,1.94860308839388,0.398594520940089,0.654261577023377,0,0,1.05656061679314,0,1.38699248602383,0,0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| ||
|short_description=p7@DSC2 | |||
}} | }} |
Latest revision as of 04:40, 19 September 2015
Short description: | p7@DSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DSC2_5end |
Coexpression cluster: | C629_esophagus_amniotic_tongue_throat_tonsil_uterus_salivary |
Association with transcript: | -108bp_to_ENST00000399347_5end |
EntrezGene: | DSC2 |
HGNC: | 3036 |
UniProt: | F8W7U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.36e-10 | 42 |
acinar cell | 1.46e-08 | 5 |
endodermal cell | 1.60e-08 | 58 |
germ line cell | 2.71e-08 | 7 |
germ cell | 2.71e-08 | 7 |
gingival epithelial cell | 3.25e-08 | 3 |
epithelial cell | 2.82e-07 | 253 |
protein secreting cell | 4.11e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.58e-12 | 160 |
endoderm | 7.58e-12 | 160 |
presumptive endoderm | 7.58e-12 | 160 |
digestive system | 6.23e-09 | 145 |
digestive tract | 6.23e-09 | 145 |
primitive gut | 6.23e-09 | 145 |
gingival epithelium | 3.25e-08 | 3 |
extraembryonic membrane | 8.37e-08 | 14 |
membranous layer | 8.37e-08 | 14 |
oral opening | 9.25e-08 | 22 |
subdivision of digestive tract | 1.55e-07 | 118 |
orifice | 3.12e-07 | 36 |
embryonic uterus | 3.95e-07 | 22 |