FFCP PHASE1:Hg19::chr15:50558226..50558263,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3067 | |EntrezGene=3067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4855 | |HGNC=4855 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559513_5end | |association_with_transcript=0bp_to_ENST00000559513_5end | ||
|cluster_id=chr15:50558226..50558263,- | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_2_at_HDC_5end | |description=CAGE_peak_2_at_HDC_5end | ||
|id=chr15:50558226..50558263,- | |id=chr15:50558226..50558263,- | ||
|ontology_enrichment_celltype=CL:0002274!2.63e-21!5;CL:0000457!2.63e-21!5;CL:0002191!2.63e-21!5;CL:0000097!2.63e-21!5;CL:0000831!2.63e-21!5;CL:0002028!2.63e-21!5;CL:0000767!4.94e-12!3;CL:0000163!1.13e-11!9;CL:0000763!2.23e-10!112;CL:0000049!2.23e-10!112;CL:0000764!3.43e-09!2;CL:0000765!3.43e-09!2;CL:0000050!3.43e-09!2;CL:0000038!3.43e-09!2;CL:0000558!3.43e-09!2;CL:0000547!3.43e-09!2;CL:0000549!3.43e-09!2;CL:0000550!3.43e-09!2;CL:0000552!3.43e-09!2;CL:0000037!2.36e-07!172;CL:0000566!2.36e-07!172 | |ontology_enrichment_celltype=CL:0002274!2.63e-21!5;CL:0000457!2.63e-21!5;CL:0002191!2.63e-21!5;CL:0000097!2.63e-21!5;CL:0000831!2.63e-21!5;CL:0002028!2.63e-21!5;CL:0000767!4.94e-12!3;CL:0000163!1.13e-11!9;CL:0000763!2.23e-10!112;CL:0000049!2.23e-10!112;CL:0000764!3.43e-09!2;CL:0000765!3.43e-09!2;CL:0000050!3.43e-09!2;CL:0000038!3.43e-09!2;CL:0000558!3.43e-09!2;CL:0000547!3.43e-09!2;CL:0000549!3.43e-09!2;CL:0000550!3.43e-09!2;CL:0000552!3.43e-09!2;CL:0000037!2.36e-07!172;CL:0000566!2.36e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.13e-47;5!CL:0000163;4.34e-26;9!CL:0000764;6.83e-19;2!CL:0000558;6.83e-19;2!CL:0002032;3.45e-10;1!CL:0000557;3.45e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.14e-47,5;CL:0002028,6.14e-47,5;CL:0000163,4.35e-26,9;CL:0000764,4.96e-19,2;CL:0000765,4.96e-19,2;CL:0000050,4.96e-19,2;CL:0000038,4.96e-19,2;CL:0000558,4.96e-19,2;CL:0000547,4.96e-19,2;CL:0000549,4.96e-19,2;CL:0000550,4.96e-19,2;CL:0000552,4.96e-19,2;CL:0000763,3.44e-14,108;CL:0000049,3.44e-14,108;CL:0002032,8.96e-09,161;CL:0000837,8.96e-09,161;CL:0000037,2.60e-08,168;CL:0000988,9.02e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!9.61e-11!31;DOID:1240!6.73e-10!39;DOID:2531!4.71e-07!51;DOID:0060083!4.71e-07!51 | |ontology_enrichment_disease=DOID:8692!9.61e-11!31;DOID:1240!6.73e-10!39;DOID:2531!4.71e-07!51;DOID:0060083!4.71e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8552;1.24e-10;1!DOID:8692;2.88e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,1.30e-10,1;DOID:8692,3.00e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.16e-19!15;UBERON:0000179!1.16e-19!15;UBERON:0000463!1.16e-19!15;UBERON:0007023!1.75e-10!115;UBERON:0000341!2.90e-08!2 | |ontology_enrichment_uberon=UBERON:0000178!1.16e-19!15;UBERON:0000179!1.16e-19!15;UBERON:0000463!1.16e-19!15;UBERON:0007023!1.75e-10!115;UBERON:0000341!2.90e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-09;15!UBERON:0000179;1.05e-09;15!UBERON:0000463;1.05e-09;15!UBERON:0002390;8.34e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.56e-10,15;UBERON:0000179,9.56e-10,15;UBERON:0000463,9.56e-10,15;UBERON:0002390,9.95e-08,98;UBERON:0003061,9.95e-08,98;UBERON:0002193,7.00e-07,108 | |||
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| ||
|short_description=p2@HDC | |short_description=p2@HDC | ||
}} | }} |
Latest revision as of 23:28, 17 September 2015
Short description: | p2@HDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HDC_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_ENST00000559513_5end |
EntrezGene: | HDC |
HGNC: | 4855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.14e-47 | 5 |
basophil mast progenitor cell | 6.14e-47 | 5 |
endocrine cell | 4.35e-26 | 9 |
erythroid lineage cell | 4.96e-19 | 2 |
erythroblast | 4.96e-19 | 2 |
megakaryocyte-erythroid progenitor cell | 4.96e-19 | 2 |
erythroid progenitor cell | 4.96e-19 | 2 |
reticulocyte | 4.96e-19 | 2 |
proerythroblast | 4.96e-19 | 2 |
basophilic erythroblast | 4.96e-19 | 2 |
polychromatophilic erythroblast | 4.96e-19 | 2 |
orthochromatic erythroblast | 4.96e-19 | 2 |
myeloid cell | 3.44e-14 | 108 |
common myeloid progenitor | 3.44e-14 | 108 |
hematopoietic oligopotent progenitor cell | 8.96e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.96e-09 | 161 |
hematopoietic stem cell | 2.60e-08 | 168 |
hematopoietic cell | 9.02e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 9.56e-10 | 15 |
haemolymphatic fluid | 9.56e-10 | 15 |
organism substance | 9.56e-10 | 15 |
hematopoietic system | 9.95e-08 | 98 |
blood island | 9.95e-08 | 98 |
hemolymphoid system | 7.00e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 1.30e-10 | 1 |
myeloid leukemia | 3.00e-07 | 31 |