FFCP PHASE1:Hg19::chr17:77924692..77924709,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125058 | |EntrezGene=125058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28356 | |HGNC=28356 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DH7 | |UniProt=Q96DH7 | ||
|association_with_transcript=-36bp_to_uc002jxh.2,uc002jxi.2,uc002jxk.1_5end | |association_with_transcript=-36bp_to_uc002jxh.2,uc002jxi.2,uc002jxk.1_5end | ||
|cluster_id=chr17:77924692..77924709,- | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_4_at_TBC1D16_5end | |description=CAGE_peak_4_at_TBC1D16_5end | ||
|id=chr17:77924692..77924709,- | |id=chr17:77924692..77924709,- | ||
|ontology_enrichment_celltype=CL:0000148!3.55e-33!10;CL:0000541!3.55e-33!10;CL:0000147!8.02e-28!14;CL:0000710!1.75e-18!20;CL:0002322!1.07e-15!5;CL:0000075!4.81e-13!27;CL:0002567!9.66e-12!3;CL:0002077!3.13e-10!33;CL:0000133!3.45e-10!59;CL:0000333!8.65e-09!41;CL:0000325!2.14e-08!39;CL:0000221!6.61e-08!71 | |ontology_enrichment_celltype=CL:0000148!3.55e-33!10;CL:0000541!3.55e-33!10;CL:0000147!8.02e-28!14;CL:0000710!1.75e-18!20;CL:0002322!1.07e-15!5;CL:0000075!4.81e-13!27;CL:0002567!9.66e-12!3;CL:0002077!3.13e-10!33;CL:0000133!3.45e-10!59;CL:0000333!8.65e-09!41;CL:0000325!2.14e-08!39;CL:0000221!6.61e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.74e-88;10!CL:0000147;6.50e-63;14!CL:0002567;4.17e-55;3!CL:0000710;4.88e-44;20!CL:0000075;1.34e-32;27!CL:0002077;8.35e-23;34!CL:0002566;2.25e-19;1!CL:0002178;3.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.74e-88,10;CL:0000541,4.74e-88,10;CL:0000147,6.50e-63,14;CL:0002567,4.17e-55,3;CL:0000710,4.88e-44,20;CL:0000075,1.34e-32,27;CL:0002077,7.34e-26,34;CL:0000333,2.08e-20,41;CL:0002566,2.25e-19,1;CL:0000133,2.59e-14,59;CL:0000221,9.61e-12,72;CL:0002178,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000133;5.58e-08;59!UBERON:0003056;3.16e-07;3!CL:0000221;9.91e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!3.20e-08!2 | |ontology_enrichment_disease=DOID:1909!3.20e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.04e-36;2!DOID:3493;3.27e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.70e-36,2;DOID:3493,3.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.55e-31!86;UBERON:0001017!1.27e-28!82;UBERON:0001049!3.72e-28!57;UBERON:0005068!3.72e-28!57;UBERON:0006241!3.72e-28!57;UBERON:0007135!3.72e-28!57;UBERON:0000073!1.28e-27!94;UBERON:0001016!1.28e-27!94;UBERON:0003075!2.36e-25!86;UBERON:0007284!2.36e-25!86;UBERON:0002346!6.76e-24!90;UBERON:0002616!3.27e-22!59;UBERON:0000955!1.27e-19!69;UBERON:0006238!1.27e-19!69;UBERON:0001893!4.46e-17!34;UBERON:0003076!5.96e-16!15;UBERON:0003057!5.96e-16!15;UBERON:0007023!6.41e-16!115;UBERON:0002780!1.22e-15!41;UBERON:0001890!1.22e-15!41;UBERON:0006240!1.22e-15!41;UBERON:0002791!2.47e-15!33;UBERON:0004121!3.23e-15!169;UBERON:0003080!3.46e-15!42;UBERON:0002020!6.04e-15!34;UBERON:0003528!6.04e-15!34;UBERON:0002619!9.86e-15!22;UBERON:0000924!1.14e-14!173;UBERON:0006601!1.14e-14!173;UBERON:0003056!6.89e-14!61;UBERON:0001869!1.67e-13!32;UBERON:0000200!2.01e-13!6;UBERON:0001950!2.08e-13!20;UBERON:0000033!7.17e-13!123;UBERON:0000956!9.26e-13!25;UBERON:0000203!9.26e-13!25;UBERON:0004733!3.97e-12!12;UBERON:0002028!3.97e-12!12;UBERON:0007277!3.97e-12!12;UBERON:0000153!5.70e-12!129;UBERON:0007811!5.70e-12!129;UBERON:0004732!4.07e-11!13;UBERON:0002771!1.53e-10!3;UBERON:0002298!3.38e-10!8;UBERON:0002680!1.12e-08!9;UBERON:0001895!1.12e-08!9;UBERON:0010092!1.12e-08!9;UBERON:0002360!6.00e-07!2;UBERON:0000094!6.00e-07!2;UBERON:0007645!6.00e-07!2;UBERON:0001871!9.02e-07!7 | |ontology_enrichment_uberon=UBERON:0005743!2.55e-31!86;UBERON:0001017!1.27e-28!82;UBERON:0001049!3.72e-28!57;UBERON:0005068!3.72e-28!57;UBERON:0006241!3.72e-28!57;UBERON:0007135!3.72e-28!57;UBERON:0000073!1.28e-27!94;UBERON:0001016!1.28e-27!94;UBERON:0003075!2.36e-25!86;UBERON:0007284!2.36e-25!86;UBERON:0002346!6.76e-24!90;UBERON:0002616!3.27e-22!59;UBERON:0000955!1.27e-19!69;UBERON:0006238!1.27e-19!69;UBERON:0001893!4.46e-17!34;UBERON:0003076!5.96e-16!15;UBERON:0003057!5.96e-16!15;UBERON:0007023!6.41e-16!115;UBERON:0002780!1.22e-15!41;UBERON:0001890!1.22e-15!41;UBERON:0006240!1.22e-15!41;UBERON:0002791!2.47e-15!33;UBERON:0004121!3.23e-15!169;UBERON:0003080!3.46e-15!42;UBERON:0002020!6.04e-15!34;UBERON:0003528!6.04e-15!34;UBERON:0002619!9.86e-15!22;UBERON:0000924!1.14e-14!173;UBERON:0006601!1.14e-14!173;UBERON:0003056!6.89e-14!61;UBERON:0001869!1.67e-13!32;UBERON:0000200!2.01e-13!6;UBERON:0001950!2.08e-13!20;UBERON:0000033!7.17e-13!123;UBERON:0000956!9.26e-13!25;UBERON:0000203!9.26e-13!25;UBERON:0004733!3.97e-12!12;UBERON:0002028!3.97e-12!12;UBERON:0007277!3.97e-12!12;UBERON:0000153!5.70e-12!129;UBERON:0007811!5.70e-12!129;UBERON:0004732!4.07e-11!13;UBERON:0002771!1.53e-10!3;UBERON:0002298!3.38e-10!8;UBERON:0002680!1.12e-08!9;UBERON:0001895!1.12e-08!9;UBERON:0010092!1.12e-08!9;UBERON:0002360!6.00e-07!2;UBERON:0000094!6.00e-07!2;UBERON:0007645!6.00e-07!2;UBERON:0001871!9.02e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@TBC1D16 | |short_description=p4@TBC1D16 | ||
}} | }} |
Latest revision as of 02:57, 18 September 2015
Short description: | p4@TBC1D16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TBC1D16_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -36bp_to_uc002jxh.2, uc002jxi.2, uc002jxk.1_5end |
EntrezGene: | TBC1D16 |
HGNC: | 28356 |
UniProt: | Q96DH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.74e-88 | 10 |
melanoblast | 4.74e-88 | 10 |
pigment cell | 6.50e-63 | 14 |
light melanocyte | 4.17e-55 | 3 |
neurecto-epithelial cell | 4.88e-44 | 20 |
columnar/cuboidal epithelial cell | 1.34e-32 | 27 |
ecto-epithelial cell | 7.34e-26 | 34 |
migratory neural crest cell | 2.08e-20 | 41 |
dark melanocyte | 2.25e-19 | 1 |
neurectodermal cell | 2.59e-14 | 59 |
ectodermal cell | 9.61e-12 | 72 |
epithelial cell of stomach | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.70e-36 | 2 |
signet ring cell adenocarcinoma | 3.27e-10 | 2 |