FFCP PHASE1:Hg19::chr19:38827799..38827808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57828 | |EntrezGene=57828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25243 | |HGNC=25243 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000475343_5end | |association_with_transcript=-51bp_to_ENST00000475343_5end | ||
|cluster_id=chr19:38827799..38827808,+ | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_9_at_CATSPERG_5end | |description=CAGE_peak_9_at_CATSPERG_5end | ||
|id=chr19:38827799..38827808,+ | |id=chr19:38827799..38827808,+ | ||
|ontology_enrichment_celltype=CL:0000039!5.82e-09!7;CL:0000586!5.82e-09!7 | |ontology_enrichment_celltype=CL:0000039!5.82e-09!7;CL:0000586!5.82e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.16e-29;7!CL:0000586;3.16e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.16e-29,7;CL:0000586,3.16e-29,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!5.63e-09!4;DOID:1612!5.63e-09!4;DOID:0050687!1.14e-07!143 | |ontology_enrichment_disease=DOID:5093!5.63e-09!4;DOID:1612!5.63e-09!4;DOID:0050687!1.14e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.13e-13;4!DOID:1612;1.13e-13;4!DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.00e-13,4;DOID:1612,1.00e-13,4;DOID:3095,4.33e-10,22;DOID:2994,4.33e-10,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@CATSPERG | |short_description=p9@CATSPERG | ||
}} | }} |
Latest revision as of 19:25, 17 September 2015
Short description: | p9@CATSPERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CATSPERG_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | -51bp_to_ENST00000475343_5end |
EntrezGene: | CATSPERG |
HGNC: | 25243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.16e-29 | 7 |
germ cell | 3.16e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.00e-13 | 4 |
breast cancer | 1.00e-13 | 4 |
germ cell and embryonal cancer | 4.33e-10 | 22 |
germ cell cancer | 4.33e-10 | 22 |