FFCP PHASE1:Hg19::chr19:43032604..43032639,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=634 | |EntrezGene=634 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1814 | |HGNC=1814 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUB1,E7ET43,P06731 | |UniProt=E7EUB1,E7ET43,P06731 | ||
|association_with_transcript=0bp_to_ENST00000308072,ENST00000351134,ENST00000358394,ENST00000377806,ENST00000378065,ENST00000403136,ENST00000403444,ENST00000446434,uc002otv.2,uc002otw.2,uc002otx.2,uc002oty.2,uc002otz.2,uc002oua.2,uc002oub.2,uc002ouc.2,uc010eij.2,uc010eik.2_5end | |association_with_transcript=0bp_to_ENST00000308072,ENST00000351134,ENST00000358394,ENST00000377806,ENST00000378065,ENST00000403136,ENST00000403444,ENST00000446434,uc002otv.2,uc002otw.2,uc002otx.2,uc002oty.2,uc002otz.2,uc002oua.2,uc002oub.2,uc002ouc.2,uc010eij.2,uc010eik.2_5end | ||
|cluster_id=chr19:43032604..43032639,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_1_at_CEACAM1_5end | |description=CAGE_peak_1_at_CEACAM1_5end | ||
|id=chr19:43032604..43032639,- | |id=chr19:43032604..43032639,- | ||
|ontology_enrichment_celltype=CL:0000223!5.41e-10!59;CL:0000066!1.24e-09!254 | |ontology_enrichment_celltype=CL:0000223!5.41e-10!59;CL:0000066!1.24e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.64e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.85e-10,58;CL:0000066,7.34e-08,253;CL:0000182,2.33e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.66e-15!115;UBERON:0004921!7.95e-13!129;UBERON:0004185!7.95e-13!129;UBERON:0004119!2.56e-12!169;UBERON:0000925!2.56e-12!169;UBERON:0006595!2.56e-12!169;UBERON:0001007!1.40e-11!155;UBERON:0001555!1.40e-11!155;UBERON:0007026!1.40e-11!155;UBERON:0001041!3.17e-09!98;UBERON:0000077!6.11e-09!130;UBERON:0005177!1.19e-08!107;UBERON:0005409!1.90e-08!35;UBERON:0000949!2.51e-08!45;UBERON:0005911!5.99e-08!82;UBERON:0000466!1.35e-07!126;UBERON:0002530!1.62e-07!59;UBERON:0003929!4.21e-07!54;UBERON:0000160!8.31e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!6.66e-15!115;UBERON:0004921!7.95e-13!129;UBERON:0004185!7.95e-13!129;UBERON:0004119!2.56e-12!169;UBERON:0000925!2.56e-12!169;UBERON:0006595!2.56e-12!169;UBERON:0001007!1.40e-11!155;UBERON:0001555!1.40e-11!155;UBERON:0007026!1.40e-11!155;UBERON:0001041!3.17e-09!98;UBERON:0000077!6.11e-09!130;UBERON:0005177!1.19e-08!107;UBERON:0005409!1.90e-08!35;UBERON:0000949!2.51e-08!45;UBERON:0005911!5.99e-08!82;UBERON:0000466!1.35e-07!126;UBERON:0002530!1.62e-07!59;UBERON:0003929!4.21e-07!54;UBERON:0000160!8.31e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002075;1.21e-07;18!UBERON:0004921;1.74e-07;33!UBERON:0002365;3.92e-07;31!UBERON:0002330;3.92e-07;31!UBERON:0000949;8.80e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.70e-13,114;UBERON:0004921,1.14e-10,118;UBERON:0005177,1.46e-10,101;UBERON:0004119,2.11e-10,160;UBERON:0000925,2.11e-10,160;UBERON:0006595,2.11e-10,160;UBERON:0001007,1.12e-09,145;UBERON:0001555,1.12e-09,145;UBERON:0007026,1.12e-09,145;UBERON:0000949,1.48e-09,45;UBERON:0002530,8.40e-09,59;UBERON:0005911,3.87e-08,82;UBERON:0005172,4.86e-08,54;UBERON:0005173,4.86e-08,54;UBERON:0003929,1.10e-07,54;UBERON:0002075,1.42e-07,18;UBERON:0005409,2.09e-07,25;UBERON:0002365,2.58e-07,31;UBERON:0002330,2.58e-07,31;UBERON:0002553,2.88e-07,61;UBERON:0002368,7.95e-07,35 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,3.48900583986214,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,9.398848906998,7.30695246104517,8.57947516319104,7.86728553697808,2.30297638858328,0.309632246632152,3.67768489791571,3.0120591877825,2.21852406100073,4.8029664359787,0.568676929949686,1.17440175733939,0,0,0,0.671746422719773,0.32389366601898,2.83333124397605,0.290796477559129,0,1.21292030593908,0.232429036905685,0,1.54853185447552,1.7261543539329,0.768482119587302,2.83778675866302,1.03423704220986,0.645484683583826,5.41705946377367,0.188242339542605,0.272906150057846,1.12361742222542,0.918251677112708,0.641858054152187,0,0.989553900560148,0.598390972864896,5.11469700639233,2.03146467040009,0.56738522469114,1.24564449799115,1.50749199154046,0,1.52032191293582,5.44859552370032,1.47311054395026,4.43047342417238,0.422510572623884,1.4882300997553,0.209658645508376,0,0,0,3.70516566863623,3.38158351238453,1.82664153764634,3.51992488922645,3.27683166757279,8.89509253863555,1.70692089026603,2.00197993518006,2.87376219977242,3.30522436392431,2.86216126360609,0.569212969109448,3.52342313622563,2.29363936875137,0,1.12101712596307,1.05353633910031,0.983548850569165,1.17903228824749,2.67281948699362,78.2432798428374,2.60737813306872,3.78758244587787,1.94826728407911,23.1733750321161,2.06224135232386,1.10766947291811,1.89562704635511,47.2656969787741,47.6017212069154,23.5146203583257,16.8573510849367,29.5599147449754,1.77943875794473,1.87278579662799,2.09071047609954,20.3956816855619,1.14966148080576,0.34362744548263,1.51811815211702,1.91139248594458,0.651083453856419,0.950452044448374,0.451725357233318,0.639933055772092,1.24930726552346,2.8413270245282,0.821127996921047,0.80642697289893,0.267440195783507,0.434473211648397,9.75227465255847,3.35350429851818,1.53435074212236,0,0,0,0.795285947051099,0,0,0,0.087834785693126,18.9919659471683,4.37154345951051,2.22470665670658,0,0,0.132957960518865,0,0,0,0.596287222100115,3.4409383804245,0.347140501607594,0,1.25849830862972,2.75118041940067,0.417989933073621,9.30300333009584,18.8556119223956,41.8400765955838,29.0037108318586,69.1847616203846,78.5879825305106,2.57364156242108,9.72170337458112,3.30408994651095,3.59246996201872,3.0405099730497,0,2.84779697870439,0.916008719652036,17.1314542666882,31.022421131866,0.872188104285069,0,0.12663051166458,0,0,0,0,0,0.24666754841716,1.55605517699883,1.61652806483626,0.817309515567294,0.302714855289863,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,1.82032272387605,0,0,0,0,0,0,0,0.907457465280168,0.179389635688862,0.427114777637135,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,10.436086070818,12.2735754265876,6.02289650316908,0.609868530647977,0.662648841607426,3.48581828608555,5.39037486079926,5.04641701751257,0,1.56449532329816,0,0,0,0,0.236613600079688,0,0.482022059766964,0.110293972732394,0.435758888184812,0.237270619111097,0.674156540800822,0.392442930250692,0,22.8828190933641,11.2193419042757,0.8231480226628,0,95.0662761163731,68.7979051674338,75.0303181485383,0,43.291930367176,0.514703430895577,2.08525542276389,1.1240175325762,2.31216636546751,1.574003567695,0,0,0,0,0.117408694235822,91.0952285372376,34.7239134432458,60.6910745628368,0,0,0.246217006087397,0,0,2.81201501960331,4.19955320497149,2.55195175036296,2.50763863567975,4.65014301622339,1.91691339582606,818.313638145162,178.033933574743,0.829312462163088,3.45887888200707,4.03975786964416,2.34942208881025,9.16772221339866,16.4104426094066,5.13217338068116,3.29047976650635,46.8535170236511,114.902225917492,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0,0,1.62786481617433,0,0,0,0.791951872933429,0.904318131178758,0.871533458600294,2.29937879718731,0,0.502257091432126,0,0,0,0,0,0,0,7.73387493555338,0.197030760201927,0,0.385029108839245,0,0,0,0.167516265334349,0,36.7013441734119,53.8490626567245,66.7208976632017,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,3.10152039184331,2.80428461064202,1.921096040462,0,0,0,0,0,0,0,1.02341449813341,0,0,0,0.177561725313127,0,0,0,25.3804844142407,10.4263364557708,113.904183313704,0,0,0.262248829918848,1.80479845162965,3.31165949548983,0,0,1.47772280450026,29.5706798584331,19.9009635173523,42.1036036399172,72.486808764436,0,0,1.52925763827023,0.831076008928724,0,0.219259876645935,0,0.769350375349168,0,0,41.4224866823844,0,0.082509499920588,8.03971753194641,3.90036147621913,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,2.80984356113663,2.49847087574638,6.63586104971837,2.8324178639554,0,0,0,0.616067160352178,0,0,0,0,0.744316738719335,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,1.21856744815642,0,0,0,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0.75894634753143,0,4.32999507264804,8.04362730642945,4.3556393944529,40.1052591309079,6.88808596273968,16.8471475667626,16.8503458343937,10.5672764095201,16.2383234954294,7.64637207142375,18.2287099895732,9.05280746739598,8.63860773481008,11.6725196014689,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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,3.48900583986214,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,9.398848906998,7.30695246104517,8.57947516319104,7.86728553697808,2.30297638858328,0.309632246632152,3.67768489791571,3.0120591877825,2.21852406100073,4.8029664359787,0.568676929949686,1.17440175733939,0,0,0,0.671746422719773,0.32389366601898,2.83333124397605,0.290796477559129,0,1.21292030593908,0.232429036905685,0,1.54853185447552,1.7261543539329,0.768482119587302,2.83778675866302,1.03423704220986,0.645484683583826,5.41705946377367,0.188242339542605,0.272906150057846,1.12361742222542,0.918251677112708,0.641858054152187,0,0.989553900560148,0.598390972864896,5.11469700639233,2.03146467040009,0.56738522469114,1.24564449799115,1.50749199154046,0,1.52032191293582,5.44859552370032,1.47311054395026,4.43047342417238,0.422510572623884,1.4882300997553,0.209658645508376,0,0,0,3.70516566863623,3.38158351238453,1.82664153764634,3.51992488922645,3.27683166757279,8.89509253863555,1.70692089026603,2.00197993518006,2.87376219977242,3.30522436392431,2.86216126360609,0.569212969109448,3.52342313622563,2.29363936875137,0,1.12101712596307,1.05353633910031,0.983548850569165,1.17903228824749,2.67281948699362,78.2432798428374,2.60737813306872,3.78758244587787,1.94826728407911,23.1733750321161,2.06224135232386,1.10766947291811,1.89562704635511,47.2656969787741,47.6017212069154,23.5146203583257,16.8573510849367,29.5599147449754,1.77943875794473,1.87278579662799,2.09071047609954,20.3956816855619,1.14966148080576,0.34362744548263,1.51811815211702,1.91139248594458,0.651083453856419,0.950452044448374,0.451725357233318,0.639933055772092,1.24930726552346,2.8413270245282,0.821127996921047,0.80642697289893,0.267440195783507,0.434473211648397,9.75227465255847,3.35350429851818,1.53435074212236,0,0,0,0.795285947051099,0,0,0,0.087834785693126,18.9919659471683,4.37154345951051,2.22470665670658,0,0,0.132957960518865,0,0,0,0.596287222100115,3.4409383804245,0.347140501607594,0,1.25849830862972,2.75118041940067,0.417989933073621,9.30300333009584,18.8556119223956,41.8400765955838,29.0037108318586,69.1847616203846,78.5879825305106,2.57364156242108,9.72170337458112,3.30408994651095,3.59246996201872,3.0405099730497,0,2.84779697870439,0.916008719652036,17.1314542666882,31.022421131866,0.872188104285069,0,0.12663051166458,0,0,0,0,0,0.24666754841716,1.55605517699883,1.61652806483626,0.817309515567294,0.302714855289863,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,1.82032272387605,0,0,0,0,0,0,0,0.907457465280168,0.179389635688862,0.427114777637135,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,10.436086070818,12.2735754265876,6.02289650316908,0.609868530647977,0.662648841607426,3.48581828608555,5.39037486079926,5.04641701751257,0,1.56449532329816,0,0,0,0,0.236613600079688,0,0.482022059766964,0.110293972732394,0.435758888184812,0.237270619111097,0.674156540800822,0.392442930250692,0,22.8828190933641,11.2193419042757,0.8231480226628,0,95.0662761163731,68.7979051674338,75.0303181485383,0,43.291930367176,0.514703430895577,2.08525542276389,1.1240175325762,2.31216636546751,1.574003567695,0,0,0,0,0.117408694235822,91.0952285372376,34.7239134432458,60.6910745628368,0,0,0.246217006087397,0,0,2.81201501960331,4.19955320497149,2.55195175036296,2.50763863567975,4.65014301622339,1.91691339582606,818.313638145162,178.033933574743,0.829312462163088,3.45887888200707,4.03975786964416,2.34942208881025,9.16772221339866,16.4104426094066,5.13217338068116,3.29047976650635,46.8535170236511,114.902225917492,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0,0,1.62786481617433,0,0,0,0.791951872933429,0.904318131178758,0.871533458600294,2.29937879718731,0,0.502257091432126,0,0,0,0,0,0,0,7.73387493555338,0.197030760201927,0,0.385029108839245,0,0,0,0.167516265334349,0,36.7013441734119,53.8490626567245,66.7208976632017,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,3.10152039184331,2.80428461064202,1.921096040462,0,0,0,0,0,0,0,1.02341449813341,0,0,0,0.177561725313127,0,0,0,25.3804844142407,10.4263364557708,113.904183313704,0,0,0.262248829918848,1.80479845162965,3.31165949548983,0,0,1.47772280450026,29.5706798584331,19.9009635173523,42.1036036399172,72.486808764436,0,0,1.52925763827023,0.831076008928724,0,0.219259876645935,0,0.769350375349168,0,0,41.4224866823844,0,0.082509499920588,8.03971753194641,3.90036147621913,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,2.80984356113663,2.49847087574638,6.63586104971837,2.8324178639554,0,0,0,0.616067160352178,0,0,0,0,0.744316738719335,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,1.21856744815642,0,0,0,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0.75894634753143,0,4.32999507264804,8.04362730642945,4.3556393944529,40.1052591309079,6.88808596273968,16.8471475667626,16.8503458343937,10.5672764095201,16.2383234954294,7.64637207142375,18.2287099895732,9.05280746739598,8.63860773481008,11.6725196014689,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| ||
|short_description=p1@CEACAM1 | |short_description=p1@CEACAM1 | ||
}} | }} |
Latest revision as of 09:47, 18 September 2015
Short description: | p1@CEACAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEACAM1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000308072, ENST00000351134, ENST00000358394, ENST00000377806, ENST00000378065, ENST00000403136, ENST00000403444, ENST00000446434, uc002otv.2, uc002otw.2, uc002otx.2, uc002oty.2, uc002otz.2, uc002oua.2, uc002oub.2, uc002ouc.2, uc010eij.2, uc010eik.2_5end |
EntrezGene: | CEACAM1 |
HGNC: | 1814 |
UniProt: | E7EUB1E7ET43P06731 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.85e-10 | 58 |
epithelial cell | 7.34e-08 | 253 |
hepatocyte | 2.33e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.70e-13 | 114 |
subdivision of digestive tract | 1.14e-10 | 118 |
trunk region element | 1.46e-10 | 101 |
endoderm-derived structure | 2.11e-10 | 160 |
endoderm | 2.11e-10 | 160 |
presumptive endoderm | 2.11e-10 | 160 |
digestive system | 1.12e-09 | 145 |
digestive tract | 1.12e-09 | 145 |
primitive gut | 1.12e-09 | 145 |
endocrine system | 1.48e-09 | 45 |
gland | 8.40e-09 | 59 |
endo-epithelium | 3.87e-08 | 82 |
abdomen element | 4.86e-08 | 54 |
abdominal segment element | 4.86e-08 | 54 |
gut epithelium | 1.10e-07 | 54 |
viscus | 1.42e-07 | 18 |
gastrointestinal system | 2.09e-07 | 25 |
exocrine gland | 2.58e-07 | 31 |
exocrine system | 2.58e-07 | 31 |
anatomical cavity | 2.88e-07 | 61 |
endocrine gland | 7.95e-07 | 35 |