FFCP PHASE1:Hg19::chr19:13050879..13050931,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:13050879..13050931,+
|short_description=p10@CALR
|description=CAGE_peak_10_at_CALR_5end
|association_with_transcript=-223bp_to_AK130190_5end
|EntrezGene=...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=811 | |EntrezGene=811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1455 | |HGNC=1455 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-223bp_to_AK130190_5end | |||
|cluster_id=chr19:13050879..13050931,+ | |||
|coexpression_cluster_id=C603 | |||
|description=CAGE_peak_10_at_CALR_5end | |||
|id=chr19:13050879..13050931,+ | |||
|ontology_enrichment_celltype=CL:0000012!4.59e-21!682;CL:0000548!1.36e-20!679;CL:0000004!1.36e-20!679;CL:0000255!1.36e-20!679;CL:0000144!6.99e-19!625;CL:0002371!1.62e-16!591;CL:0000055!3.35e-15!180;CL:0000220!1.13e-12!246;CL:0002321!1.33e-12!248;CL:0000222!8.05e-11!119;CL:0000003!3.30e-10!722;CL:0000192!5.07e-10!42;CL:0000514!5.07e-10!42;CL:0000183!2.53e-09!59;CL:0000680!3.10e-09!57;CL:0000056!3.10e-09!57;CL:0000355!3.10e-09!57;CL:0000359!5.09e-09!32;CL:0000393!9.05e-09!60;CL:0000211!9.05e-09!60;CL:0000187!2.01e-08!54;CL:0000034!8.25e-08!444;CL:0000723!1.06e-07!436;CL:0000048!1.78e-07!430;CL:0000063!4.00e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.59e-09;32!CL:0000192;1.57e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.58e-13,250;CL:0000222,2.28e-11,121;CL:0000192,5.93e-10,43;CL:0000514,5.93e-10,43;CL:0000680,2.66e-09,58;CL:0000056,2.66e-09,58;CL:0000355,2.66e-09,58;CL:0000359,4.39e-09,32;CL:0000393,7.65e-09,61;CL:0000211,7.65e-09,61;CL:0000187,1.74e-08,55;CL:0000034,1.36e-07,441;CL:0000723,1.73e-07,433;CL:0000048,2.89e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;1.57e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.77e-12!79;UBERON:0007798!1.77e-12!79;UBERON:0000055!8.93e-12!69;UBERON:0003914!1.99e-11!118;UBERON:0001637!3.37e-11!42;UBERON:0003509!3.37e-11!42;UBERON:0004572!3.37e-11!42;UBERON:0001981!8.53e-11!60;UBERON:0007500!8.53e-11!60;UBERON:0004537!8.53e-11!60;UBERON:0006965!8.53e-11!60;UBERON:0005256!1.40e-10!143;UBERON:0004872!2.73e-10!84;UBERON:0000486!1.59e-09!82;UBERON:0000490!3.44e-09!138;UBERON:0000914!4.92e-09!83;UBERON:0002329!4.92e-09!83;UBERON:0003077!4.92e-09!83;UBERON:0003059!4.92e-09!83;UBERON:0007282!4.92e-09!83;UBERON:0009618!4.92e-09!83;UBERON:0007285!4.92e-09!83;UBERON:0004573!9.24e-09!33;UBERON:0004571!9.24e-09!33;UBERON:0004290!1.03e-08!70;UBERON:0001134!9.28e-08!61;UBERON:0002036!9.28e-08!61;UBERON:0003082!9.28e-08!61;UBERON:0002385!6.64e-07!63;UBERON:0001015!6.64e-07!63;UBERON:0000383!6.64e-07!63;UBERON:0001009!8.25e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.26e-08;42!UBERON:0003509;1.26e-08;42!UBERON:0004572;1.26e-08;42!UBERON:0004573;6.60e-08;33!UBERON:0004571;6.60e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.30e-12,78;UBERON:0007798,2.30e-12,78;UBERON:0000055,1.18e-11,68;UBERON:0003914,1.26e-11,117;UBERON:0001637,2.79e-11,42;UBERON:0003509,2.79e-11,42;UBERON:0004572,2.79e-11,42;UBERON:0007500,1.14e-10,59;UBERON:0001981,1.14e-10,59;UBERON:0004537,1.14e-10,59;UBERON:0006965,1.14e-10,59;UBERON:0000490,2.45e-10,148;UBERON:0004872,4.63e-10,83;UBERON:0007503,7.75e-10,78;UBERON:0005256,8.69e-10,122;UBERON:0000486,1.17e-09,83;UBERON:0002329,7.72e-09,71;UBERON:0003059,7.72e-09,71;UBERON:0007282,7.72e-09,71;UBERON:0004290,7.72e-09,71;UBERON:0009618,7.72e-09,71;UBERON:0004573,8.01e-09,33;UBERON:0004571,8.01e-09,33;UBERON:0007524,1.11e-08,73;UBERON:0003104,2.36e-08,160;UBERON:0009142,2.36e-08,160;UBERON:0003077,2.51e-08,72;UBERON:0007285,2.51e-08,72;UBERON:0001134,7.14e-08,62;UBERON:0002036,7.14e-08,62;UBERON:0003082,7.14e-08,62;UBERON:0001009,3.62e-07,112;UBERON:0004535,4.72e-07,109;UBERON:0002385,6.95e-07,64;UBERON:0001015,6.95e-07,64;UBERON:0000383,6.95e-07,64 | |||
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| ||
|short_description=p10@CALR | |||
}} | }} |
Latest revision as of 22:09, 15 September 2015
Short description: | p10@CALR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CALR_5end |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | -223bp_to_AK130190_5end |
EntrezGene: | CALR |
HGNC: | 1455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.58e-13 | 250 |
mesodermal cell | 2.28e-11 | 121 |
smooth muscle cell | 5.93e-10 | 43 |
smooth muscle myoblast | 5.93e-10 | 43 |
muscle precursor cell | 2.66e-09 | 58 |
myoblast | 2.66e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.66e-09 | 58 |
vascular associated smooth muscle cell | 4.39e-09 | 32 |
electrically responsive cell | 7.65e-09 | 61 |
electrically active cell | 7.65e-09 | 61 |
muscle cell | 1.74e-08 | 55 |
stem cell | 1.36e-07 | 441 |
somatic stem cell | 1.73e-07 | 433 |
multi fate stem cell | 2.89e-07 | 427 |