FFCP PHASE1:Hg19::chr21:47552696..47552739,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47552696..47552739,+ | |||
|coexpression_cluster_id=C2637 | |coexpression_cluster_id=C2637 | ||
|description=CAGE_peak_at_chr21:47552696..47552739,+ | |description=CAGE_peak_at_chr21:47552696..47552739,+ | ||
|id=chr21:47552696..47552739,+ | |id=chr21:47552696..47552739,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.54e-36!180;CL:0000057!2.00e-26!75;CL:0000680!9.94e-14!57;CL:0000056!9.94e-14!57;CL:0000355!9.94e-14!57;CL:0002620!2.73e-13!23;CL:0000187!9.92e-13!54;CL:0000183!2.34e-12!59;CL:0000048!3.32e-12!430;CL:0000393!4.62e-12!60;CL:0000211!4.62e-12!60;CL:0000723!2.70e-11!436;CL:0000034!3.78e-10!444;CL:0000192!1.30e-08!42;CL:0000514!1.30e-08!42;CL:0000499!1.46e-07!27;CL:0002570!9.64e-07!8;CL:0002334!9.76e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.54e-36!180;CL:0000057!2.00e-26!75;CL:0000680!9.94e-14!57;CL:0000056!9.94e-14!57;CL:0000355!9.94e-14!57;CL:0002620!2.73e-13!23;CL:0000187!9.92e-13!54;CL:0000183!2.34e-12!59;CL:0000048!3.32e-12!430;CL:0000393!4.62e-12!60;CL:0000211!4.62e-12!60;CL:0000723!2.70e-11!436;CL:0000034!3.78e-10!444;CL:0000192!1.30e-08!42;CL:0000514!1.30e-08!42;CL:0000499!1.46e-07!27;CL:0002570!9.64e-07!8;CL:0002334!9.76e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.35e-14;23!CL:0002334;3.28e-10;12!CL:0002570;2.70e-09;8!CL:0000057;2.30e-08;73!CL:0000499;4.16e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.14e-18,76;CL:0002620,4.72e-14,23;CL:0000048,2.15e-11,427;CL:0000723,7.14e-11,433;CL:0000034,3.34e-10,441;CL:0002334,8.30e-10,12;CL:0002570,2.23e-09,8;CL:0002320,3.21e-08,361;CL:0000499,4.19e-08,28;CL:0000680,4.85e-07,58;CL:0000056,4.85e-07,58;CL:0000355,4.85e-07,58;CL:0000187,6.51e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.51e-08;5!DOID:450;1.51e-08;5!DOID:66;1.51e-08;5!DOID:423;1.51e-08;5!DOID:0080000;1.51e-08;5!DOID:11722;1.51e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.24e-08,5;DOID:450,2.24e-08,5;DOID:66,2.24e-08,5;DOID:423,2.24e-08,5;DOID:0080000,2.24e-08,5;DOID:11722,2.24e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.11e-18!83;UBERON:0002329!9.11e-18!83;UBERON:0003077!9.11e-18!83;UBERON:0003059!9.11e-18!83;UBERON:0007282!9.11e-18!83;UBERON:0009618!9.11e-18!83;UBERON:0007285!9.11e-18!83;UBERON:0004290!6.78e-17!70;UBERON:0000486!2.99e-14!82;UBERON:0001134!1.49e-13!61;UBERON:0002036!1.49e-13!61;UBERON:0003082!1.49e-13!61;UBERON:0002385!1.79e-13!63;UBERON:0001015!1.79e-13!63;UBERON:0000383!1.79e-13!63;UBERON:0005256!2.67e-11!143;UBERON:0002199!3.08e-10!45;UBERON:0002416!3.08e-10!45;UBERON:0002097!9.38e-09!40;UBERON:0002100!3.05e-08!216;UBERON:0003102!4.47e-07!95 | |ontology_enrichment_uberon=UBERON:0000914!9.11e-18!83;UBERON:0002329!9.11e-18!83;UBERON:0003077!9.11e-18!83;UBERON:0003059!9.11e-18!83;UBERON:0007282!9.11e-18!83;UBERON:0009618!9.11e-18!83;UBERON:0007285!9.11e-18!83;UBERON:0004290!6.78e-17!70;UBERON:0000486!2.99e-14!82;UBERON:0001134!1.49e-13!61;UBERON:0002036!1.49e-13!61;UBERON:0003082!1.49e-13!61;UBERON:0002385!1.79e-13!63;UBERON:0001015!1.79e-13!63;UBERON:0000383!1.79e-13!63;UBERON:0005256!2.67e-11!143;UBERON:0002199!3.08e-10!45;UBERON:0002416!3.08e-10!45;UBERON:0002097!9.38e-09!40;UBERON:0002100!3.05e-08!216;UBERON:0003102!4.47e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;4.30e-10;46!UBERON:0002416;4.30e-10;46!UBERON:0002097;2.99e-09;41!UBERON:0001013;1.32e-07;14!UBERON:0003102;2.16e-07;50!UBERON:0004457;4.98e-07;9!UBERON:0000042;4.98e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,8.20e-14,46;UBERON:0002416,8.20e-14,46;UBERON:0002097,4.84e-11,41;UBERON:0007524,2.23e-10,73;UBERON:0002329,7.16e-10,71;UBERON:0003059,7.16e-10,71;UBERON:0007282,7.16e-10,71;UBERON:0004290,7.16e-10,71;UBERON:0009618,7.16e-10,71;UBERON:0003077,1.27e-09,72;UBERON:0007285,1.27e-09,72;UBERON:0002384,3.57e-09,371;UBERON:0003104,6.46e-09,160;UBERON:0009142,6.46e-09,160;UBERON:0000486,1.05e-08,83;UBERON:0007503,2.79e-08,78;UBERON:0005256,4.80e-08,122;UBERON:0001013,1.27e-07,14;UBERON:0002385,3.24e-07,64;UBERON:0001015,3.24e-07,64;UBERON:0000383,3.24e-07,64;UBERON:0001134,5.85e-07,62;UBERON:0002036,5.85e-07,62;UBERON:0003082,5.85e-07,62 | |||
|phase1_expression=2.18014055124668,0.856402095563933,3.66481450649525,1.0007329835313,1.34088328328186,0.872338524100369,5.06599756336621,1.26343974685366,0,0,0,0,0,3.09415882400117,0.994192127183747,2.01697543935533,0.602694528023977,0,1.95173119516203,4.062994916534,0.612002073732759,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,0,0.12786256184353,28.9151321907653,3.50936537445123,1.01392563272577,15.1104329939709,0.486634870302636,0.189069634328136,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,2.40597972162702,2.38336525463794,4.87622255272983,0.354668382198357,1.12135520028461,5.33744978648525,0.49333509683432,0.933633106199299,0.269421344139376,0.490385709340376,8.62737337576109,0.576175924479999,0.468642863667593,2.18512053781224,6.27519003698894,2.98897361103602,0.469737994575059,1.94247533241758,0.98315564691574,0.61246251376468,0.982674538494144,0.103325781175765,0,0.989067717114227,0.910161361938026,0.718618141816238,1.34668891163253,0.125118519871964,0.831192346452549,0.438977620880838,0,0.150238058906597,0.113432183160021,7.17558542755448,11.9592137738398,16.1068244881267,6.60200411385685,1.03052529238439,1.28820270022815,6.70020682793723,4.72573730275545,0.974370051611986,3.28163906517349,14.1756843909141,0.484938170456436,9.23024940543197,0.503760491138201,6.27374191548804,0,0,0,0,0,0,0,0,0.36497735907583,3.12899064659632,1.28648187638577,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0,0,0.651616610620649,0,0,0.231860809950154,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.784917590417525,0,0.22001485746285,2.45616259939778,14.3062578340753,10.143633030672,3.98907174877306,0,3.08648849114571,0,0.532844358032199,1.42977993658148,9.76718889704597,0.823240336780769,0.325736184293735,1.42156779497018,0.791951872933429,0,0,0.199945982364114,0,0,0,6.9491208092559,2.29723871668228,5.70547620162874,0.868687840005475,0.205476322550383,2.32779252211864,0,0,0.646882724578552,0.128343036279748,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,3.43536176813592,0.500170521059677,1.08506009479894,1.87173775377726,0.892144943985809,0.788512075169673,1.40569697991256,4.21324539618807,0,0,3.32112799267718,0.184369168541703,4.43106433787223,15.4682914395565,1.71571711905428,0,0,0.106727557803444,0,0,0,2.72918588600655,1.07423381301644,1.12264037773229,4.99742682097234,7.16390148693385,0.64341568457443,0,2.31314540703983,2.13074070375753,3.20295908453856,1.03850885836724,2.20799719073923,0,0,0,1.60740227430449,1.45672934405374,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,1.6068392984416,4.25351160485337,1.3864375540318,1.07452572308291,0.964856007391714,3.00776685631166,0.580066775656914,0.340906509664404,2.75999310504886,0,0,0,0,0.464845549297286,13.5369309137175,0,2.15623506123262,0,4.34966496037536,5.37440235401368,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,1.79128453917934,0.42793898803392,3.18203247925937,0.78494864019923,1.43897966066652,0.274537029736055,0.235624804691373,3.43710218674637,0,0.421258456238981,0.48763373908959,0,0,7.6439950388472,0.141405431953713,0,0.551365343546124,0.66343897524122,0.438450885253763,1.73632660280006,1.9676842561399,1.42037263873893,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,1.41904425628239,1.05553817648832,2.96365403663912,2.65631221636001,1.39973888097993,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0,0,0,0.445234820091624,0,0.422250816255987,0.398495976502139,0.828851746593443,0,0,0,6.84287092855976,0,0,0,0.887790650732402,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0.455768223388005,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.442287822516696,1.83309043480088,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,2.76209081994573,2.41981432097328,0,0.252746318513952,0,0,0,0,0.313932918407225,0,0.284609546029793,0.554698692052555,0,0,0,0.17472666824203,2.92376255201748,0,0,0,0.0969890164884194,0.0882561266915003,1.12990370390266,0.411125773940253,0,0,0,0.0801588202515337,0.426905989478705,0.999048047910651,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0.203996435272644,0,0,0,0,0,0,0.837847203816763,1.14580212005842,0.717873024576814,0.199679000498991,0,0,0.53746777989381,5.40449825313605,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.157363764404994,0.633602019116439,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,2.55582032678133,0.453248366080503,0,0,0,0,0,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| ||
|short_description=p@chr21:47552696..47552739,+ | |short_description=p@chr21:47552696..47552739,+ | ||
}} | }} |
Latest revision as of 18:49, 28 July 2015
Short description: | p@chr21:47552696..47552739, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47552696..47552739, + |
Coexpression cluster: | C2637_Chondrocyte_Pericytes_Mesenchymal_Fibroblast_Cardiac_Smooth_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.14e-18 | 76 |
skin fibroblast | 4.72e-14 | 23 |
multi fate stem cell | 2.15e-11 | 427 |
somatic stem cell | 7.14e-11 | 433 |
stem cell | 3.34e-10 | 441 |
preadipocyte | 8.30e-10 | 12 |
mesenchymal stem cell of adipose | 2.23e-09 | 8 |
connective tissue cell | 3.21e-08 | 361 |
stromal cell | 4.19e-08 | 28 |
muscle precursor cell | 4.85e-07 | 58 |
myoblast | 4.85e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.85e-07 | 58 |
muscle cell | 6.51e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
integument | 8.20e-14 | 46 |
integumental system | 8.20e-14 | 46 |
skin of body | 4.84e-11 | 41 |
dense mesenchyme tissue | 2.23e-10 | 73 |
somite | 7.16e-10 | 71 |
presomitic mesoderm | 7.16e-10 | 71 |
presumptive segmental plate | 7.16e-10 | 71 |
dermomyotome | 7.16e-10 | 71 |
trunk paraxial mesoderm | 7.16e-10 | 71 |
paraxial mesoderm | 1.27e-09 | 72 |
presumptive paraxial mesoderm | 1.27e-09 | 72 |
connective tissue | 3.57e-09 | 371 |
mesenchyme | 6.46e-09 | 160 |
entire embryonic mesenchyme | 6.46e-09 | 160 |
multilaminar epithelium | 1.05e-08 | 83 |
epithelial vesicle | 2.79e-08 | 78 |
trunk mesenchyme | 4.80e-08 | 122 |
adipose tissue | 1.27e-07 | 14 |
muscle tissue | 3.24e-07 | 64 |
musculature | 3.24e-07 | 64 |
musculature of body | 3.24e-07 | 64 |
skeletal muscle tissue | 5.85e-07 | 62 |
striated muscle tissue | 5.85e-07 | 62 |
myotome | 5.85e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.24e-08 | 5 |
myotonic disease | 2.24e-08 | 5 |
muscle tissue disease | 2.24e-08 | 5 |
myopathy | 2.24e-08 | 5 |
muscular disease | 2.24e-08 | 5 |
myotonic dystrophy | 2.24e-08 | 5 |