FFCP PHASE1:Hg19::chr6:107235234..107235237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100422737 | |EntrezGene=100422737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=62bp_to_ENST00000436659,NR_033557,uc003pro.1_5end | |association_with_transcript=62bp_to_ENST00000436659,NR_033557,uc003pro.1_5end | ||
|cluster_id=chr6:107235234..107235237,- | |||
|coexpression_cluster_id=C4540 | |coexpression_cluster_id=C4540 | ||
|description=CAGE_peak_3_at_LOC100422737_5end | |description=CAGE_peak_3_at_LOC100422737_5end | ||
|id=chr6:107235234..107235237,- | |id=chr6:107235234..107235237,- | ||
|ontology_enrichment_celltype=CL:0000313!4.53e-14!1;CL:0000181!8.02e-10!12;CL:0000417!8.02e-10!12;CL:0000668!8.02e-10!12;CL:0000414!8.02e-10!12;CL:0000412!8.02e-10!12;CL:0000182!8.02e-10!12;CL:0000159!1.12e-07!2 | |ontology_enrichment_celltype=CL:0000313!4.53e-14!1;CL:0000181!8.02e-10!12;CL:0000417!8.02e-10!12;CL:0000668!8.02e-10!12;CL:0000414!8.02e-10!12;CL:0000412!8.02e-10!12;CL:0000182!8.02e-10!12;CL:0000159!1.12e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000313;3.10e-50;1!CL:0000159;6.30e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,6.58e-50,1;CL:0000159,9.18e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.10e-50;1!UBERON:0003104;3.58e-07;31 | |||
|ontology_enrichment_disease=DOID:2152!4.53e-14!1;DOID:299!2.57e-08!25;DOID:3493!9.25e-08!2;DOID:4468!1.99e-07!2 | |ontology_enrichment_disease=DOID:2152!4.53e-14!1;DOID:299!2.57e-08!25;DOID:3493!9.25e-08!2;DOID:4468!1.99e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:2152;3.10e-50;1!DOID:3493;6.30e-26;2!DOID:299;5.49e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,6.58e-50,1;DOID:3493,4.32e-26,2;DOID:299,5.49e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0005172!2.64e-17!55;UBERON:0005173!2.64e-17!55;UBERON:0002417!1.65e-15!61;UBERON:0000916!1.65e-15!61;UBERON:0004911!4.53e-14!1;UBERON:0001000!7.55e-14!1;UBERON:0005352!7.55e-14!1;UBERON:0009497!2.28e-12!25;UBERON:0000015!2.28e-12!25;UBERON:0002423!2.28e-12!25;UBERON:0006235!2.28e-12!25;UBERON:0004161!2.28e-12!25;UBERON:0002107!1.21e-10!19;UBERON:0006925!1.21e-10!19;UBERON:0008836!1.21e-10!19;UBERON:0008835!3.18e-09!22;UBERON:0003894!3.18e-09!22;UBERON:0009854!7.83e-09!23;UBERON:0005177!2.13e-08!107;UBERON:0007499!3.84e-08!25;UBERON:0009569!6.78e-08!113;UBERON:0005057!7.76e-08!26;UBERON:0009856!7.76e-08!26;UBERON:0004909!1.12e-07!2;UBERON:0002113!1.12e-07!27;UBERON:0003918!1.12e-07!27;UBERON:0005095!1.12e-07!27;UBERON:0007687!1.12e-07!27 | |ontology_enrichment_uberon=UBERON:0005172!2.64e-17!55;UBERON:0005173!2.64e-17!55;UBERON:0002417!1.65e-15!61;UBERON:0000916!1.65e-15!61;UBERON:0004911!4.53e-14!1;UBERON:0001000!7.55e-14!1;UBERON:0005352!7.55e-14!1;UBERON:0009497!2.28e-12!25;UBERON:0000015!2.28e-12!25;UBERON:0002423!2.28e-12!25;UBERON:0006235!2.28e-12!25;UBERON:0004161!2.28e-12!25;UBERON:0002107!1.21e-10!19;UBERON:0006925!1.21e-10!19;UBERON:0008836!1.21e-10!19;UBERON:0008835!3.18e-09!22;UBERON:0003894!3.18e-09!22;UBERON:0009854!7.83e-09!23;UBERON:0005177!2.13e-08!107;UBERON:0007499!3.84e-08!25;UBERON:0009569!6.78e-08!113;UBERON:0005057!7.76e-08!26;UBERON:0009856!7.76e-08!26;UBERON:0004909!1.12e-07!2;UBERON:0002113!1.12e-07!27;UBERON:0003918!1.12e-07!27;UBERON:0005095!1.12e-07!27;UBERON:0007687!1.12e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;3.10e-50;1!UBERON:0004909;6.30e-26;2!UBERON:0002110;8.69e-18;3!UBERON:0002294;2.11e-08;7!UBERON:0001173;2.11e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.58e-50,1;UBERON:0004909,9.18e-26,2;UBERON:0002110,9.46e-18,3;UBERON:0006242,9.46e-18,3;UBERON:0002294,8.37e-07,9;UBERON:0001173,8.37e-07,9;UBERON:0004912,8.37e-07,9 | |||
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|short_description=p3@LOC100422737 | |short_description=p3@LOC100422737 | ||
}} | }} |
Latest revision as of 16:06, 19 September 2015
Short description: | p3@LOC100422737 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100422737_5end |
Coexpression cluster: | C4540_serous_renal_Hepatocyte_signet_gall_liver_kidney |
Association with transcript: | 62bp_to_ENST00000436659, NR_033557, uc003pro.1_5end |
EntrezGene: | LOC100422737 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 6.58e-50 | 1 |
seromucus secreting cell | 9.18e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.58e-50 | 1 |
epithelium of gonad | 9.18e-26 | 2 |
gallbladder | 9.46e-18 | 3 |
gall bladder primordium | 9.46e-18 | 3 |
biliary system | 8.37e-07 | 9 |
biliary tree | 8.37e-07 | 9 |
biliary bud | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.58e-50 | 1 |
signet ring cell adenocarcinoma | 4.32e-26 | 2 |
adenocarcinoma | 5.49e-09 | 25 |