FFCP PHASE1:Hg19::chr6:47010042..47010053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=266977 | |EntrezGene=266977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18990 | |HGNC=18990 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T601 | |UniProt=Q5T601 | ||
|association_with_transcript=-12bp_to_ENST00000371243_5end | |association_with_transcript=-12bp_to_ENST00000371243_5end | ||
|cluster_id=chr6:47010042..47010053,- | |||
|coexpression_cluster_id=C2862 | |coexpression_cluster_id=C2862 | ||
|description=CAGE_peak_3_at_GPR110_5end | |description=CAGE_peak_3_at_GPR110_5end | ||
|id=chr6:47010042..47010053,- | |id=chr6:47010042..47010053,- | ||
|ontology_enrichment_celltype=CL:0002076!5.23e-30!43;CL:0000066!3.69e-25!254;CL:0000223!5.16e-25!59;CL:0002251!1.04e-16!21;CL:0002368!1.06e-10!13;CL:0002327!3.37e-08!4;CL:0002202!7.11e-08!9;CL:0002632!7.11e-08!9;CL:0002621!2.60e-07!3;CL:0000068!5.63e-07!3;CL:0000069!5.63e-07!3;CL:0000307!5.63e-07!3;CL:0000377!5.63e-07!3 | |ontology_enrichment_celltype=CL:0002076!5.23e-30!43;CL:0000066!3.69e-25!254;CL:0000223!5.16e-25!59;CL:0002251!1.04e-16!21;CL:0002368!1.06e-10!13;CL:0002327!3.37e-08!4;CL:0002202!7.11e-08!9;CL:0002632!7.11e-08!9;CL:0002621!2.60e-07!3;CL:0000068!5.63e-07!3;CL:0000069!5.63e-07!3;CL:0000307!5.63e-07!3;CL:0000377!5.63e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.03e-15;3!CL:0002202;5.92e-09;9!CL:0002632;5.92e-09;9!CL:0002076;1.61e-08;42!CL:0002149;5.42e-08;6!CL:0002255;5.42e-08;6!CL:0000307;2.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.80e-21,253;CL:0002621,2.31e-15,3;CL:0002076,4.88e-12,42;CL:0000223,1.32e-11,58;CL:0002202,6.33e-09,9;CL:0002632,6.33e-09,9;CL:0002149,4.07e-08,6;CL:0002255,4.07e-08,6;CL:0000068,3.14e-07,3;CL:0000069,3.14e-07,3;CL:0000307,3.14e-07,3;CL:0000377,3.14e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.34e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!1.49e-21!14;DOID:305!3.92e-19!106;DOID:0050687!2.60e-11!143;DOID:299!4.73e-11!25 | |ontology_enrichment_disease=DOID:1749!1.49e-21!14;DOID:305!3.92e-19!106;DOID:0050687!2.60e-11!143;DOID:299!4.73e-11!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.77e-16;14!DOID:299;1.18e-14;25!DOID:4929;5.64e-11;2!DOID:3001;5.42e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.34e-19,106;DOID:1749,7.70e-17,14;DOID:299,1.52e-14,25;DOID:0050687,3.49e-13,143;DOID:4929,1.11e-10,2;DOID:3001,4.07e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.44e-19!169;UBERON:0000925!2.44e-19!169;UBERON:0006595!2.44e-19!169;UBERON:0001007!2.58e-17!155;UBERON:0001555!2.58e-17!155;UBERON:0007026!2.58e-17!155;UBERON:0005911!2.68e-12!82;UBERON:0000344!6.21e-11!12;UBERON:0004921!2.00e-10!129;UBERON:0004185!2.00e-10!129;UBERON:0001004!3.27e-10!72;UBERON:0000161!4.44e-10!35;UBERON:0005153!6.44e-10!37;UBERON:0002294!8.58e-10!7;UBERON:0001173!8.58e-10!7;UBERON:0004912!8.58e-10!7;UBERON:0000077!8.59e-10!130;UBERON:0000464!3.50e-09!104;UBERON:0000466!4.03e-09!126;UBERON:0005177!6.39e-09!107;UBERON:0003729!1.21e-08!5;UBERON:0005178!1.47e-08!34;UBERON:0002224!1.47e-08!34;UBERON:0005181!3.26e-08!35;UBERON:0001911!3.37e-08!4;UBERON:0005333!3.37e-08!4;UBERON:0008425!3.37e-08!4;UBERON:0005311!3.37e-08!4;UBERON:0006554!8.16e-08!44;UBERON:0001041!1.43e-07!98;UBERON:0001008!1.49e-07!45;UBERON:0000065!1.58e-07!53;UBERON:0001949!2.60e-07!3;UBERON:0003343!2.93e-07!4;UBERON:0004785!2.93e-07!4;UBERON:0000166!3.81e-07!21;UBERON:0003929!3.88e-07!54;UBERON:0005157!4.71e-07!51 | |ontology_enrichment_uberon=UBERON:0004119!2.44e-19!169;UBERON:0000925!2.44e-19!169;UBERON:0006595!2.44e-19!169;UBERON:0001007!2.58e-17!155;UBERON:0001555!2.58e-17!155;UBERON:0007026!2.58e-17!155;UBERON:0005911!2.68e-12!82;UBERON:0000344!6.21e-11!12;UBERON:0004921!2.00e-10!129;UBERON:0004185!2.00e-10!129;UBERON:0001004!3.27e-10!72;UBERON:0000161!4.44e-10!35;UBERON:0005153!6.44e-10!37;UBERON:0002294!8.58e-10!7;UBERON:0001173!8.58e-10!7;UBERON:0004912!8.58e-10!7;UBERON:0000077!8.59e-10!130;UBERON:0000464!3.50e-09!104;UBERON:0000466!4.03e-09!126;UBERON:0005177!6.39e-09!107;UBERON:0003729!1.21e-08!5;UBERON:0005178!1.47e-08!34;UBERON:0002224!1.47e-08!34;UBERON:0005181!3.26e-08!35;UBERON:0001911!3.37e-08!4;UBERON:0005333!3.37e-08!4;UBERON:0008425!3.37e-08!4;UBERON:0005311!3.37e-08!4;UBERON:0006554!8.16e-08!44;UBERON:0001041!1.43e-07!98;UBERON:0001008!1.49e-07!45;UBERON:0000065!1.58e-07!53;UBERON:0001949!2.60e-07!3;UBERON:0003343!2.93e-07!4;UBERON:0004785!2.93e-07!4;UBERON:0000166!3.81e-07!21;UBERON:0003929!3.88e-07!54;UBERON:0005157!4.71e-07!51 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.03e-15;3!UBERON:0004807;2.08e-10;22!UBERON:0003350;5.38e-10;8!UBERON:0000486;5.39e-10;12!UBERON:0007196;4.26e-08;15!UBERON:0001558;4.26e-08;15!UBERON:0005911;6.07e-08;36!UBERON:0006554;3.98e-07;30!UBERON:0001008;3.98e-07;30!UBERON:0002294;6.58e-07;7!UBERON:0001173;6.58e-07;7!UBERON:0003126;7.21e-07;7!UBERON:0003929;7.21e-07;7!UBERON:0001005;7.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.31e-15,3;UBERON:0003350,6.61e-10,8;UBERON:0005177,5.34e-09,101;UBERON:0005911,7.93e-09,82;UBERON:0007196,4.38e-08,15;UBERON:0001558,4.38e-08,15;UBERON:0004807,5.45e-08,28;UBERON:0003126,8.42e-07,7;UBERON:0001005,8.42e-07,7 | |||
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| ||
|short_description=p3@GPR110 | |short_description=p3@GPR110 | ||
}} | }} |
Latest revision as of 03:38, 19 September 2015
Short description: | p3@GPR110 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPR110_5end |
Coexpression cluster: | C2862_lung_bronchioalveolar_epidermoid_prostate_mucinous_bile_squamous |
Association with transcript: | -12bp_to_ENST00000371243_5end |
EntrezGene: | GPR110 |
HGNC: | 18990 |
UniProt: | Q5T601 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.80e-21 | 253 |
gingival epithelial cell | 2.31e-15 | 3 |
endo-epithelial cell | 4.88e-12 | 42 |
endodermal cell | 1.32e-11 | 58 |
epithelial cell of tracheobronchial tree | 6.33e-09 | 9 |
epithelial cell of lower respiratory tract | 6.33e-09 | 9 |
epithelial cell of uterus | 4.07e-08 | 6 |
stromal cell of endometrium | 4.07e-08 | 6 |
duct epithelial cell | 3.14e-07 | 3 |
branched duct epithelial cell | 3.14e-07 | 3 |
tracheal epithelial cell | 3.14e-07 | 3 |
tracheoblast | 3.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.31e-15 | 3 |
epithelium of mucosa | 6.61e-10 | 8 |
trunk region element | 5.34e-09 | 101 |
endo-epithelium | 7.93e-09 | 82 |
tracheobronchial tree | 4.38e-08 | 15 |
lower respiratory tract | 4.38e-08 | 15 |
respiratory system epithelium | 5.45e-08 | 28 |
trachea | 8.42e-07 | 7 |
respiratory airway | 8.42e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.34e-19 | 106 |
squamous cell carcinoma | 7.70e-17 | 14 |
adenocarcinoma | 1.52e-14 | 25 |
cell type cancer | 3.49e-13 | 143 |
tubular adenocarcinoma | 1.11e-10 | 2 |
female reproductive endometrioid cancer | 4.07e-08 | 6 |