FFCP PHASE1:Hg19::chr19:49496810..49496813,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49496810..49496813,-
|short_description=p2@GYS1
|description=CAGE_peak_2_at_GYS1_5end
|association_with_transcript=-200bp_to_NM_001161587,NM_002103,NR_027...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2997 | |EntrezGene=2997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4706 | |HGNC=4706 | ||
|TSSclassifier=strong | |||
|UniProt=P13807,Q9BTT9 | |UniProt=P13807,Q9BTT9 | ||
|association_with_transcript=-200bp_to_NM_001161587,NM_002103,NR_027763,uc002plp.2,uc010emm.2,uc010xzz.1,uc010yaa.1_5end | |||
|cluster_id=chr19:49496810..49496813,- | |||
|description=CAGE_peak_2_at_GYS1_5end | |||
|id=chr19:49496810..49496813,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000307;8.68e-10;3!CL:0000319;3.54e-08;1!CL:0002032;9.38e-08;1!CL:0000557;9.38e-08;1!CL:0002202;4.40e-07;9!CL:0002632;4.40e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.81e-10,3;CL:0000069,7.81e-10,3;CL:0000307,7.81e-10,3;CL:0000377,7.81e-10,3;CL:0000319,3.55e-08,1;CL:0002202,4.90e-07,9;CL:0002632,4.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;8.68e-10;3 | |||
|ontology_enrichment_disease=DOID:162!2.39e-09!235;DOID:14566!1.34e-08!239;DOID:0050687!1.59e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.54e-08;1!DOID:2355;9.38e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.55e-08,1;DOID:2355,1.99e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;9.38e-08;1!UBERON:0003703;9.38e-08;1!UBERON:0001174;9.38e-08;1!UBERON:0004914;9.38e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.87e-07,1;UBERON:0003703,1.87e-07,1;UBERON:0001174,1.87e-07,1;UBERON:0004914,1.87e-07,1 | |||
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| ||
|short_description=p2@GYS1 | |||
}} | }} |
Latest revision as of 05:48, 19 September 2015
Short description: | p2@GYS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GYS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -200bp_to_NM_001161587, NM_002103, NR_027763, uc002plp.2, uc010emm.2, uc010xzz.1, uc010yaa.1_5end |
EntrezGene: | GYS1 |
HGNC: | 4706 |
UniProt: | P13807Q9BTT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.81e-10 | 3 |
branched duct epithelial cell | 7.81e-10 | 3 |
tracheal epithelial cell | 7.81e-10 | 3 |
tracheoblast | 7.81e-10 | 3 |
mucus secreting cell | 3.55e-08 | 1 |
epithelial cell of tracheobronchial tree | 4.90e-07 | 9 |
epithelial cell of lower respiratory tract | 4.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.87e-07 | 1 |
extrahepatic bile duct | 1.87e-07 | 1 |
common bile duct | 1.87e-07 | 1 |
duodenal papilla | 1.87e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.55e-08 | 1 |
anemia | 1.99e-07 | 1 |