UBERON:0002105: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FMA_7192-MA_0002443 | ||
|comment=Auditory system is general anatomical term in FMA | |comment=Auditory system is general anatomical term in FMA | ||
|created_by= | |created_by= | ||
| | |def="A sensory system for the sense of hearing[WP]." [Wikipedia:Auditory_system] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0002105 | |||
|is_a=UBERON:0001032 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=vestibulo-auditory system | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The sensory system used for balance and hearing.[AAO]" xsd:string | |||
|subset=functional_classification;;uberon_slim;;vertebrate_core | |||
|synonym="auditory organ system" EXACT [];;"auditory system" RELATED [];;"auditory/vestibular system" RELATED [];;"vestibuloauditory system" EXACT [];;"vestibuloauditory system" RELATED [] | |||
|union_of= | |||
|xref=AAO:0000631;;FMA:7192;;FMA:78500;;http://upload.wikimedia.org/wikipedia/commons/d/d2/Anatomy_of_the_Human_Ear.svg;;http://upload.wikimedia.org/wikipedia/commons/thumb/7/7c/HumanEar.jpg/200px-HumanEar.jpg;;MA:0002443;;ncithesaurus:Auditory_System;;NIF_GrossAnatomy:nlx_anat_090817;;OpenCyc:Mx4rvViwtJwpEbGdrcN5Y29ycA;;TAO:0001138;;XAO:0003195;;ZFA:0001138 | |||
}} | }} |
Latest revision as of 17:26, 12 September 2014
Name: | vestibulo-auditory system | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "A sensory system for the sense of hearing[WP]." [Wikipedia:Auditory_system] | ||
Xrefs: |
| ||
Synonyms: |
"auditory organ system" EXACT [] "auditory system" RELATED [] "auditory/vestibular system" RELATED [] "vestibuloauditory system" EXACT [] "vestibuloauditory system" RELATED [] | ||
Comments: | Auditory system is general anatomical term in FMA | ||
Alt_id: | UBERON:FMA_7192-MA_0002443 | ||
Subset: |
functional_classification uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0001032(sensory system) |
---|
Children
part of: | UBERON:0001690 (ear),UBERON:0002827 (vestibulocochlear ganglion),UBERON:0004681 (vestibular system),UBERON:0016490 (auditory system) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 11959-126C6 (Neurons - spiral ganglion, pool1)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002105 (vestibulo-auditory system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_c61890a629f48235895cf0426ce3701c | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_c61890a629f48235895cf0426ce3701c | p3@Fanca |
1.87e-86 | FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_c61890a629f48235895cf0426ce3701c | p@chr16:93971357..93971363, - |
1.87e-86 | FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_c61890a629f48235895cf0426ce3701c | p@chr8:94180607..94180619, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_c61890a629f48235895cf0426ce3701c | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_c61890a629f48235895cf0426ce3701c | p1@Kncn |
1.87e-86 | FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_c61890a629f48235895cf0426ce3701c | p7@A730017C20Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_c61890a629f48235895cf0426ce3701c | p@chr3:35012397..35012405, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_c61890a629f48235895cf0426ce3701c | p3@Kncn |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_c61890a629f48235895cf0426ce3701c | p11@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_c61890a629f48235895cf0426ce3701c | p@chr2:73232344..73232356, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_c61890a629f48235895cf0426ce3701c | p2@Espnl |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_c61890a629f48235895cf0426ce3701c | p@chr9:42206730..42206739, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_c61890a629f48235895cf0426ce3701c | p10@Sec11a |
1.87e-86 | FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_c61890a629f48235895cf0426ce3701c | p@chr15:65641741..65641748, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_c61890a629f48235895cf0426ce3701c | p@chr13:78257454..78257465, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_c61890a629f48235895cf0426ce3701c | p@chr13:48087761..48087775, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_c61890a629f48235895cf0426ce3701c | p41@Cacnb2 |
1.87e-86 | FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_c61890a629f48235895cf0426ce3701c | p2@Slc26a5 |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_c61890a629f48235895cf0426ce3701c | p3@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_c61890a629f48235895cf0426ce3701c | p@chr18:81327205..81327211, + |
1.87e-86 | FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_c61890a629f48235895cf0426ce3701c | p@chr11:11599532..11599539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_c61890a629f48235895cf0426ce3701c | p@chr12:77084875..77084885, + |
1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_c61890a629f48235895cf0426ce3701c | p@chr12:109905468..109905474, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_c61890a629f48235895cf0426ce3701c | p2@Espnl |
1.87e-86 | FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_c61890a629f48235895cf0426ce3701c | p@chr11:4689776..4689785, - |
1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_c61890a629f48235895cf0426ce3701c | p@chr4:154208086..154208123, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_c61890a629f48235895cf0426ce3701c | p3@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_c61890a629f48235895cf0426ce3701c | p11@Tsga14 |
1.87e-86 | FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_c61890a629f48235895cf0426ce3701c | p@chr15:85334335..85334353, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_c61890a629f48235895cf0426ce3701c | p@chr6:113251614..113251623, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_c61890a629f48235895cf0426ce3701c | p@chr3:154459246..154459253, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_c61890a629f48235895cf0426ce3701c | p4@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_c61890a629f48235895cf0426ce3701c | p1@Dytn |
1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_c61890a629f48235895cf0426ce3701c | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_c61890a629f48235895cf0426ce3701c | p@chr7:139597684..139597691, + |
1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_c61890a629f48235895cf0426ce3701c | p@chr11:8405038..8405048, - |
1.87e-86 | FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_c61890a629f48235895cf0426ce3701c | p1@Tmc1 |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_c61890a629f48235895cf0426ce3701c | p@chr17:13983179..13983190, + |
1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_c61890a629f48235895cf0426ce3701c | p@chr18:38104702..38104718, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_c61890a629f48235895cf0426ce3701c | p2@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_c61890a629f48235895cf0426ce3701c | p@chr15:89215333..89215341, + |
1.87e-86 | FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_c61890a629f48235895cf0426ce3701c | p@chrX:154140800..154140810, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_c61890a629f48235895cf0426ce3701c | p@chr7:133957514..133957529, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_c61890a629f48235895cf0426ce3701c | p@chr1:172843813..172843834, - |
1.87e-86 | FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_c61890a629f48235895cf0426ce3701c | p7@A730017C20Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_c61890a629f48235895cf0426ce3701c | p@chr1:43454162..43454170, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_c61890a629f48235895cf0426ce3701c | p1@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_c61890a629f48235895cf0426ce3701c | p@chr5:72652660..72652667, + |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_c61890a629f48235895cf0426ce3701c | p@chr16:93971367..93971379, - |
1.87e-86 | FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_c61890a629f48235895cf0426ce3701c | p1@Tmprss3 |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_c61890a629f48235895cf0426ce3701c | p@chr17:13983198..13983203, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_c61890a629f48235895cf0426ce3701c | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_c61890a629f48235895cf0426ce3701c | p1@Otog |
1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_c61890a629f48235895cf0426ce3701c | p@chr12:77084875..77084885, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_c61890a629f48235895cf0426ce3701c | p@chr6:86745686..86745727, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_c61890a629f48235895cf0426ce3701c | p@chr9:42207697..42207705, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_c61890a629f48235895cf0426ce3701c | p@chr3:154459231..154459240, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_c61890a629f48235895cf0426ce3701c | p@chr13:37195838..37195870, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_c61890a629f48235895cf0426ce3701c | p7@Glt25d2 |
1.87e-86 | FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_c61890a629f48235895cf0426ce3701c | p@chr14:102297747..102297765, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_c61890a629f48235895cf0426ce3701c | p10@Sec11a |
1.87e-86 | FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_c61890a629f48235895cf0426ce3701c | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_c61890a629f48235895cf0426ce3701c | p9@Otof |
1.87e-86 | FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_c61890a629f48235895cf0426ce3701c | p@chr1:194818647..194818660, - |
1.87e-86 | FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_c61890a629f48235895cf0426ce3701c | p1@Grxcr1 |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_c61890a629f48235895cf0426ce3701c | p@chr9:42207375..42207384, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_c61890a629f48235895cf0426ce3701c | p1@Gm1322 |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_c61890a629f48235895cf0426ce3701c | p@chr12:13508046..13508055, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_c61890a629f48235895cf0426ce3701c | p@chr9:50968647..50968668, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_c61890a629f48235895cf0426ce3701c | p3@Tmprss3 |
1.87e-86 | FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_c61890a629f48235895cf0426ce3701c | p@chr5:3909290..3909299, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_c61890a629f48235895cf0426ce3701c | p41@Cacnb2 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_c61890a629f48235895cf0426ce3701c | p6@Jag1 |
1.87e-86 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_c61890a629f48235895cf0426ce3701c | p@chr11:11599532..11599539, - |
1.87e-86 | FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_c61890a629f48235895cf0426ce3701c | p@chr18:38104702..38104718, - |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_c61890a629f48235895cf0426ce3701c | p4@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_c61890a629f48235895cf0426ce3701c | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_c61890a629f48235895cf0426ce3701c | p@chr1:194818647..194818660, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_c61890a629f48235895cf0426ce3701c | p4@Gipc3 |
1.87e-86 | FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_c61890a629f48235895cf0426ce3701c | p18@Trpm3 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_c61890a629f48235895cf0426ce3701c | p2@Plscr5 |
1.87e-86 | FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_c61890a629f48235895cf0426ce3701c | p@chr14:102297747..102297765, + |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_c61890a629f48235895cf0426ce3701c | p@chr8:13414289..13414295, + |
1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_c61890a629f48235895cf0426ce3701c | p1@Tectb |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_c61890a629f48235895cf0426ce3701c | p@chr13:78257491..78257498, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_c61890a629f48235895cf0426ce3701c | p2@Tomt |
1.87e-86 | FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_c61890a629f48235895cf0426ce3701c | p@chr1:172843813..172843834, - |
1.87e-86 | FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_c61890a629f48235895cf0426ce3701c | p2@Otof |
1.87e-86 | FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_c61890a629f48235895cf0426ce3701c | p@chr4:130461150..130461185, + |
1.87e-86 | FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_c61890a629f48235895cf0426ce3701c | p@chr6:113251570..113251578, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_c61890a629f48235895cf0426ce3701c | p@chr3:100724698..100724706, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_c61890a629f48235895cf0426ce3701c | p11@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_c61890a629f48235895cf0426ce3701c | p2@9230102O04Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_c61890a629f48235895cf0426ce3701c | p@chr19:10536797..10536802, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_c61890a629f48235895cf0426ce3701c | p@chr9:56208792..56208814, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_c61890a629f48235895cf0426ce3701c | p1@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_c61890a629f48235895cf0426ce3701c | p1@Kcna10 |
1.87e-86 | FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_c61890a629f48235895cf0426ce3701c | p5@BC030867 |
1.87e-86 | FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_c61890a629f48235895cf0426ce3701c | p@chr16:93971367..93971379, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "The sensory system used for balance and hearing.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.