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{{UBERON
{{UBERON
|id=UBERON:0004456
|alt_id=
|name=entire sense organ system
|namespace=
|def="Sum of all sensory systems in an organism." []
|xref=FMA:78499
|is_a=UBERON:0000467
|synonym="sense organ system" EXACT [FMA:78499]
|comment=note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs
|comment=note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Sum of all sensory systems in an organism." []
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004456
|is_a=UBERON:0000467
|is_obsolete=
|located_in=
|located_in=
|name=entire sense organ system
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="sense organ system" EXACT [FMA:78499]
|union_of=
|xref=FMA:78499
}}
}}

Latest revision as of 17:46, 12 September 2014

Name:entire sense organ system
Namespace:FANTOM
Definition:"Sum of all sensory systems in an organism." []
Xrefs:
links:
FMA:78499
Synonyms: "sense organ system" EXACT [FMA:78499]
Comments:note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system),UBERON:0002330 (exocrine system),UBERON:0002390 (hematopoietic system),UBERON:0002405 (immune system),UBERON:0002416 (integumental system),UBERON:0002423 (hepatobiliary system)
part of:UBERON:0001032 (sensory system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004456 (entire sense organ system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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