Personal tools

UBERON:0004582: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0004582
|alt_id=
|name=venous system
|namespace=
|def=
|xref=BTO:0004692;;EHDAA2:0002171;;EHDAA:486;;EMAPA:16240;;MA:0002720;;ncithesaurus:Venous_System;;SCTID:362060003;;VHOG:0000277
|is_a=UBERON:0007798
|synonym="vein system" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004582
|is_a=UBERON:0007798
|is_obsolete=
|located_in=
|located_in=
|name=venous system
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="vein system" EXACT []
|union_of=
|xref=BTO:0004692;;EHDAA2:0002171;;EHDAA:486;;EMAPA:16240;;MA:0002720;;ncithesaurus:Venous_System;;SCTID:362060003;;VHOG:0000277
}}
}}

Latest revision as of 17:46, 12 September 2014

Name:venous system
Namespace:FANTOM
Xrefs:
links:

BTO:0004692
EHDAA2:0002171
EHDAA:486
EMAPA:16240
MA:0002720
ncithesaurus:Venous_System
SCTID:362060003

VHOG:0000277
Synonyms: "vein system" EXACT []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0007798(vascular system)



Children

part of:UBERON:0003920 (venous blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004582 (venous system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.63e-79FFCP PHASE1:Hg19::chr19:7861475..7861491,+#_275aac042d4b665183379adfb258538ap@chr19:7861475..7861491, +
4.63e-79FFCP PHASE2:Hg19::chr19:7861475..7861491,+#_275aac042d4b665183379adfb258538ap@chr19:7861475..7861491, +
3.75e-66FFCP PHASE1:Hg19::chr5:120649811..120649848,+#_d88488b08b1d61c701ba38bb9089d37cp@chr5:120649811..120649848, +
3.75e-66FFCP PHASE2:Hg19::chr5:120649811..120649848,+#_d88488b08b1d61c701ba38bb9089d37cp@chr5:120649811..120649848, +
5.48e-53FFCP PHASE1:Hg19::chr9:35754222..35754237,-#_912895de8384282662930df36002cfc6p3@MSMP
5.48e-53FFCP PHASE2:Hg19::chr9:35754222..35754237,-#_912895de8384282662930df36002cfc6p3@MSMP
6.77e-49FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_383908a5a1afddb8282819b539379309p@chr9:139563124..139563129, +
6.77e-49FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_383908a5a1afddb8282819b539379309p@chr9:139563124..139563129, +
8.62e-47FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_843fe5cc8797895ef4eefd53707ee31dp7@WDFY4
8.62e-47FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_843fe5cc8797895ef4eefd53707ee31dp7@WDFY4
9.75e-45FFCP PHASE1:Hg19::chr1:78512168..78512171,-#_ffcb451169203706a4813f6a98e999cap@chr1:78512168..78512171, -
9.75e-45FFCP PHASE2:Hg19::chr1:78512168..78512171,-#_ffcb451169203706a4813f6a98e999cap@chr1:78512168..78512171, -
3.18e-44FFCP PHASE1:Hg19::chr10:94590997..94591006,+#_768072105fbae2d8a2ea8d34bce9625ap11@EXOC6
3.18e-44FFCP PHASE2:Hg19::chr10:94590997..94591006,+#_768072105fbae2d8a2ea8d34bce9625ap11@EXOC6
4.77e-40FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_9735a156d58a358f813d4805de06a328p6@WDFY4
4.77e-40FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_9735a156d58a358f813d4805de06a328p6@WDFY4
1.49e-39FFCP PHASE1:Hg19::chr1:61415107..61415136,-#_b34509c2372cd4f4a1f1284878cac7fdp@chr1:61415107..61415136, -
1.49e-39FFCP PHASE2:Hg19::chr1:61415107..61415136,-#_b34509c2372cd4f4a1f1284878cac7fdp@chr1:61415107..61415136, -
2.39e-39FFCP PHASE1:Hg19::chr12:10794718..10794741,+#_b410286bf77c885d5e5107f5f253b7a5p@chr12:10794718..10794741, +
2.39e-39FFCP PHASE2:Hg19::chr12:10794718..10794741,+#_b410286bf77c885d5e5107f5f253b7a5p@chr12:10794718..10794741, +
3.02e-39FFCP PHASE2:Hg19::chr10:82173423..82173439,+#_fe64533b9ece5eb672c19cfad83522d9p5@FAM213A
3.02e-39FFCP PHASE1:Hg19::chr10:82173423..82173439,+#_fe64533b9ece5eb672c19cfad83522d9p5@FAM213A
3.51e-38FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_6e17a6eeefcab457da2ad42932fb5761p5@PARP12
3.51e-38FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_6e17a6eeefcab457da2ad42932fb5761p5@PARP12
1.04e-37FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_6f0dd9b22a4fe382b569dbc230db6960p11@MANSC1
1.04e-37FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_6f0dd9b22a4fe382b569dbc230db6960p11@MANSC1
1.43e-37FFCP PHASE1:Hg19::chr9:139559213..139559241,+#_a1b1819d37edb7721ddc132a67b122c5p5@EGFL7
1.43e-37FFCP PHASE2:Hg19::chr9:139559213..139559241,+#_a1b1819d37edb7721ddc132a67b122c5p5@EGFL7
6.69e-36FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_4f321b272ce7efcb7b7b5ee85d082021p@chr1:172926077..172926120, -
6.69e-36FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_4f321b272ce7efcb7b7b5ee85d082021p@chr1:172926077..172926120, -
9.57e-36FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_57ca1abdf88e0c1a582a94641d62ab42p@chr6:11607864..11607875, +
9.57e-36FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_57ca1abdf88e0c1a582a94641d62ab42p@chr6:11607864..11607875, +
3.67e-35FFCP PHASE1:Hg19::chr7:106720036..106720059,-#_2919b595a658439223f2f226e392cf2cp@chr7:106720036..106720059, -
3.67e-35FFCP PHASE2:Hg19::chr7:106720036..106720059,-#_2919b595a658439223f2f226e392cf2cp@chr7:106720036..106720059, -
1.05e-34FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_b9417a8dd48b27f285755d4141ce6a57p@chr6:78171774..78171792, +
1.05e-34FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_b9417a8dd48b27f285755d4141ce6a57p@chr6:78171774..78171792, +
8.87e-34FFCP PHASE2:Hg19::chr10:94590950..94590955,+#_49bcc5a3e7a6cbbb6bde3cce8cb5d58ap13@EXOC6
8.87e-34FFCP PHASE1:Hg19::chr1:78510648..78510661,+#_49bcc5a3e7a6cbbb6bde3cce8cb5d58ap7@GIPC2
8.87e-34FFCP PHASE1:Hg19::chr10:94590950..94590955,+#_49bcc5a3e7a6cbbb6bde3cce8cb5d58ap13@EXOC6
8.87e-34FFCP PHASE2:Hg19::chr1:78510648..78510661,+#_49bcc5a3e7a6cbbb6bde3cce8cb5d58ap7@GIPC2
1.55e-33FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_18cc58e35e06f1260bea9e117ac2ddd9p12@KSR2
1.55e-33FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_18cc58e35e06f1260bea9e117ac2ddd9p12@KSR2
1.55e-33FFCP PHASE1:Hg19::chr2:72789511..72789554,-#_18cc58e35e06f1260bea9e117ac2ddd9p@chr2:72789511..72789554, -
1.55e-33FFCP PHASE2:Hg19::chr2:72789511..72789554,-#_18cc58e35e06f1260bea9e117ac2ddd9p@chr2:72789511..72789554, -
1.73e-33FFCP PHASE1:Hg19::chr12:105962745..105962748,+#_be1a63ac48d77157f39bd771585e9ae1p@chr12:105962745..105962748, +
1.73e-33FFCP PHASE2:Hg19::chr12:105962745..105962748,+#_be1a63ac48d77157f39bd771585e9ae1p@chr12:105962745..105962748, +
3.04e-33FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_a6b3ea77f263cee845e6225fdfb1afbdp@chr3:43538305..43538325, -
3.04e-33FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_a6b3ea77f263cee845e6225fdfb1afbdp@chr3:43538305..43538325, -
2.06e-32FFCP PHASE1:Hg19::chr1:186946611..186946622,+#_b46d037e24bccb0a082f4aba7d5700c4p@chr1:186946611..186946622, +
2.06e-32FFCP PHASE2:Hg19::chr1:186946611..186946622,+#_b46d037e24bccb0a082f4aba7d5700c4p@chr1:186946611..186946622, +
2.62e-32FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_01e8ddf31eb39a8bd6a83dab396542dep12@PARP12
2.62e-32FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_01e8ddf31eb39a8bd6a83dab396542dep12@PARP12
4.23e-31FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_4af82736a3e5dcf094ac20f67db666adp@chr6:78171746..78171769, +
4.23e-31FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_4af82736a3e5dcf094ac20f67db666adp@chr6:78171746..78171769, +
4.39e-31FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_6c5e8a769fc1b29e5fcff4374b1b951ep@chr1:22264210..22264241, +
4.39e-31FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_6c5e8a769fc1b29e5fcff4374b1b951ep@chr1:22264210..22264241, +
7.0e-31FFCP PHASE1:Hg19::chr18:22932208..22932219,-#_bb35a097a7aaed3da2c61311677f4023p6@ZNF521
7.0e-31FFCP PHASE2:Hg19::chr18:22932208..22932219,-#_bb35a097a7aaed3da2c61311677f4023p6@ZNF521
3.09e-30FFCP PHASE1:Hg19::chr4:162563953..162563962,-#_9770206748386144c6d439211f543631p@chr4:162563953..162563962, -
3.09e-30FFCP PHASE2:Hg19::chr4:162563953..162563962,-#_9770206748386144c6d439211f543631p@chr4:162563953..162563962, -
7.85e-30FFCP PHASE1:Hg19::chr5:71853090..71853107,+#_42cd71237db597d68633dd9bf97b1cf1p@chr5:71853090..71853107, +
7.85e-30FFCP PHASE2:Hg19::chr5:71853090..71853107,+#_42cd71237db597d68633dd9bf97b1cf1p@chr5:71853090..71853107, +
8.25e-30FFCP PHASE1:Hg19::chr22:50331023..50331030,+#_dcc1cb92f3fa3a4eaef72b4abde3f0a7p@chr22:50331023..50331030, +
8.25e-30FFCP PHASE2:Hg19::chr22:50331023..50331030,+#_dcc1cb92f3fa3a4eaef72b4abde3f0a7p@chr22:50331023..50331030, +
1.15e-29FFCP PHASE1:Hg19::chr12:105863627..105863633,+#_039e7406097a94c23523e331abc7a040p@chr12:105863627..105863633, +
1.15e-29FFCP PHASE2:Hg19::chr12:105863627..105863633,+#_039e7406097a94c23523e331abc7a040p@chr12:105863627..105863633, +
1.66e-29FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_c762ac3d3936858b9e79a2a9787cf3b6p@chr10:99655692..99655725, -
1.66e-29FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_c762ac3d3936858b9e79a2a9787cf3b6p@chr10:99655692..99655725, -
3.22e-29FFCP PHASE1:Hg19::chr13:75941109..75941132,-#_eef90520427db1df1ca05fc6ba60fd59p@chr13:75941109..75941132, -
3.22e-29FFCP PHASE2:Hg19::chr13:75941109..75941132,-#_eef90520427db1df1ca05fc6ba60fd59p@chr13:75941109..75941132, -
6.2e-29FFCP PHASE2:Hg19::chr1:78511901..78511912,+#_291d8abbacdc66a9cbeeb2ba6ce7ab44p6@GIPC2
6.2e-29FFCP PHASE1:Hg19::chr1:78511901..78511912,+#_291d8abbacdc66a9cbeeb2ba6ce7ab44p6@GIPC2
7.5e-29FFCP PHASE1:Hg19::chr1:186946659..186946664,+#_cf6e064f0da49575939a06852ff9a97bp@chr1:186946659..186946664, +
7.5e-29FFCP PHASE2:Hg19::chr1:186946659..186946664,+#_cf6e064f0da49575939a06852ff9a97bp@chr1:186946659..186946664, +
7.78e-29FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_7ccd376530d244175ce53bb1f661702ap1@MIR216A
7.78e-29FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_7ccd376530d244175ce53bb1f661702ap1@MIR216A
9.25e-29FFCP PHASE1:Hg19::chr21:39869867..39869880,-#_4f30d3579bc0942f39d637976b7a1a82p@chr21:39869867..39869880, -
9.25e-29FFCP PHASE2:Hg19::chr21:39869867..39869880,-#_4f30d3579bc0942f39d637976b7a1a82p@chr21:39869867..39869880, -
9.98e-29FFCP PHASE2:Hg19::chr11:59875891..59875903,-#_2f31e08fb1c14fe52d58f666512af2fap@chr11:59875891..59875903, -
9.98e-29FFCP PHASE1:Hg19::chr11:59875891..59875903,-#_2f31e08fb1c14fe52d58f666512af2fap@chr11:59875891..59875903, -
3.37e-28FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_f4a8316fdf7c221868f21903f993d4edp@chr12:105863705..105863718, +
3.37e-28FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_f4a8316fdf7c221868f21903f993d4edp@chr12:105863705..105863718, +
4.57e-28FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_1eb9a7cea3a8cb9e29515d16929db528p10@PTPRB
4.57e-28FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_1eb9a7cea3a8cb9e29515d16929db528p10@PTPRB
4.79e-28FFCP PHASE1:Hg19::chr19:47220191..47220198,-#_5e36f61c8f2aabfec7dfc466d4eba6f1p14@PRKD2
4.79e-28FFCP PHASE2:Hg19::chr19:47220191..47220198,-#_5e36f61c8f2aabfec7dfc466d4eba6f1p14@PRKD2
1.4e-27FFCP PHASE1:Hg19::chr6:142622846..142622853,+#_4c27f922a892fdd6918083223c5e5532p12@GPR126
1.4e-27FFCP PHASE2:Hg19::chr6:142622846..142622853,+#_4c27f922a892fdd6918083223c5e5532p12@GPR126
2.78e-27FFCP PHASE1:Hg19::chr12:6232421..6232447,-#_5805089e88726d3925f37a7f929eb00cp8@VWF
2.78e-27FFCP PHASE2:Hg19::chr12:6232421..6232447,-#_5805089e88726d3925f37a7f929eb00cp8@VWF
6.96e-27FFCP PHASE1:Hg19::chr13:32838839..32838850,+#_a908d0175e8f571190d9bf3e5db045adp20@FRY
6.96e-27FFCP PHASE2:Hg19::chr13:32838839..32838850,+#_a908d0175e8f571190d9bf3e5db045adp20@FRY
1.14e-26FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_86f285d77b59a04d070d246b05047af0p1@ENST00000513158
1.14e-26FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_86f285d77b59a04d070d246b05047af0p1@ENST00000513158
1.47e-26FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_0aecdd86e915b3ede0109456f6e13e75p@chr18:33046982..33046991, -
1.47e-26FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_0aecdd86e915b3ede0109456f6e13e75p@chr18:33046982..33046991, -
1.93e-26FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_d81e0b3e1022b7c4a6bf33a2ec307281p@chr12:105863636..105863650, +
1.93e-26FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_d81e0b3e1022b7c4a6bf33a2ec307281p@chr12:105863636..105863650, +
6.75e-26FFCP PHASE1:Hg19::chr1:2485709..2485728,+#_a03dd70d5571d3cf12de067584793c81p@chr1:2485709..2485728, +
6.75e-26FFCP PHASE2:Hg19::chr1:2485709..2485728,+#_a03dd70d5571d3cf12de067584793c81p@chr1:2485709..2485728, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004582&oldid=3277669"