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{{UBERON
{{UBERON
|id=UBERON:0005088
|alt_id=
|name=sebaceous gland placode
|namespace=
|def="A sebaceous gland placode is a thickening of the ectoderm that will give rise to the sebaceous gland bud[GO]." [GO:0060791]
|xref=
|is_a=UBERON:0005085
|synonym=
|comment=todo - add bud
|comment=todo - add bud
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A sebaceous gland placode is a thickening of the ectoderm that will give rise to the sebaceous gland bud[GO]." [GO:0060791]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=UBERON:0011272
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005088
|is_a=UBERON:0011814
|is_obsolete=
|located_in=
|located_in=
|name=sebaceous gland placode
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 17:50, 12 September 2014

Name:sebaceous gland placode
Namespace:FANTOM
Definition:"A sebaceous gland placode is a thickening of the ectoderm that will give rise to the sebaceous gland bud[GO]." [GO:0060791]
Comments:todo - add bud

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0011814(non-neurogenic ectodermal placode)
develops_from:UBERON:0011272(embryonic skin basal layer)



Children

develops from:UBERON:0001821 (sebaceous gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005088 (sebaceous gland placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr1:153321274..153321283,-#_5cb2ad8577b3ac87ca6409f3f4c52c22p2@PGLYRP4
1.55e-98FFCP PHASE1:Hg19::chr1:153321274..153321283,-#_5cb2ad8577b3ac87ca6409f3f4c52c22p2@PGLYRP4
2.56e-98FFCP PHASE2:Hg19::chrY:7671916..7671924,-#_ebb898dfda47c1b8e1a3ea04c74514b9p@chrY:7671916..7671924, -
2.56e-98FFCP PHASE1:Hg19::chrY:7671916..7671924,-#_ebb898dfda47c1b8e1a3ea04c74514b9p@chrY:7671916..7671924, -
3.49e-79FFCP PHASE1:Hg19::chr17:19702846..19702866,-#_c71b60c4ce3bb6fed875d64235a27e6fp@chr17:19702846..19702866, -
3.49e-79FFCP PHASE2:Hg19::chr17:19702846..19702866,-#_c71b60c4ce3bb6fed875d64235a27e6fp@chr17:19702846..19702866, -
5.22e-79FFCP PHASE2:Hg19::chr1:207038965..207038969,+#_281eec8af01caafc02da6cbeda9703a2p1@IL20
5.22e-79FFCP PHASE1:Hg19::chr1:207038965..207038969,+#_281eec8af01caafc02da6cbeda9703a2p1@IL20
5.53e-66FFCP PHASE1:Hg19::chr6:12577789..12577820,-#_449c3473bf86011df3a7f549b880f202p@chr6:12577789..12577820, -
5.53e-66FFCP PHASE2:Hg19::chr6:12577789..12577820,-#_449c3473bf86011df3a7f549b880f202p@chr6:12577789..12577820, -
4.77e-57FFCP PHASE1:Hg19::chr10:118187325..118187332,+#_0c44f6fea95db77b1aba016f22dd3fb1p5@PNLIPRP3
4.77e-57FFCP PHASE2:Hg19::chr10:118187325..118187332,+#_0c44f6fea95db77b1aba016f22dd3fb1p5@PNLIPRP3
1.13e-56FFCP PHASE2:Hg19::chr9:27524485..27524505,+#_14c23b212c468c3bd1dcdd5a907a3ec9p2@IFNK
1.13e-56FFCP PHASE1:Hg19::chr9:27524485..27524505,+#_14c23b212c468c3bd1dcdd5a907a3ec9p2@IFNK
4.0e-50FFCP PHASE1:Hg19::chr8:22844791..22844808,+#_4938e61c3f38950047422a88bcf1e841p16@RHOBTB2
4.0e-50FFCP PHASE2:Hg19::chr8:22844791..22844808,+#_4938e61c3f38950047422a88bcf1e841p16@RHOBTB2
4.52e-50FFCP PHASE2:Hg19::chr15:42566576..42566581,+#_aac6075fe1e118c50d810e1476c894b9p18@GANC
4.52e-50FFCP PHASE1:Hg19::chr15:42566576..42566581,+#_aac6075fe1e118c50d810e1476c894b9p18@GANC
4.52e-50FFCP PHASE2:Hg19::chr5:150951045..150951053,-#_aac6075fe1e118c50d810e1476c894b9p@chr5:150951045..150951053, -
4.52e-50FFCP PHASE1:Hg19::chr12:122430653..122430662,+#_aac6075fe1e118c50d810e1476c894b9p@chr12:122430653..122430662, +
4.52e-50FFCP PHASE1:Hg19::chr5:150951045..150951053,-#_aac6075fe1e118c50d810e1476c894b9p@chr5:150951045..150951053, -
4.52e-50FFCP PHASE2:Hg19::chr12:122430653..122430662,+#_aac6075fe1e118c50d810e1476c894b9p@chr12:122430653..122430662, +
5.15e-50FFCP PHASE2:Hg19::chr2:238933920..238933935,+#_ab4361b1e76a3eac80c058a4f46a0babp7@UBE2F
5.15e-50FFCP PHASE1:Hg19::chr2:238933920..238933935,+#_ab4361b1e76a3eac80c058a4f46a0babp7@UBE2F
1.09e-49FFCP PHASE1:Hg19::chr7:121156367..121156370,-#_fcaed413fbd238f31bc1d3b28b3ea0efp@chr7:121156367..121156370, -
1.09e-49FFCP PHASE2:Hg19::chr7:121156367..121156370,-#_fcaed413fbd238f31bc1d3b28b3ea0efp@chr7:121156367..121156370, -
3.19e-45FFCP PHASE1:Hg19::chr18:9538358..9538360,+#_426845c68bb1641a9f6fb66d65d3b55dp@chr18:9538358..9538360, +
3.19e-45FFCP PHASE2:Hg19::chr18:9538358..9538360,+#_426845c68bb1641a9f6fb66d65d3b55dp@chr18:9538358..9538360, +
9.79e-45FFCP PHASE2:Hg19::chr9:117972180..117972191,+#_275ac98097b9c43149ce2e5fe913c9c0p@chr9:117972180..117972191, +
9.79e-45FFCP PHASE1:Hg19::chr9:117972180..117972191,+#_275ac98097b9c43149ce2e5fe913c9c0p@chr9:117972180..117972191, +
1.91e-44FFCP PHASE1:Hg19::chr10:47740297..47740299,+#_5f80b60692fce108e6bba446bea0b3ddp1@FAM25HP
1.91e-44FFCP PHASE2:Hg19::chr10:47740297..47740299,+#_5f80b60692fce108e6bba446bea0b3ddp1@FAM25HP
1.34e-40FFCP PHASE1:Hg19::chr3:189654013..189654016,-#_0c485e41676628ed0a5ff3a62ba447f8p@chr3:189654013..189654016, -
1.34e-40FFCP PHASE2:Hg19::chr7:97984729..97984742,-#_0c485e41676628ed0a5ff3a62ba447f8p14@BAIAP2L1
1.34e-40FFCP PHASE1:Hg19::chr7:97984729..97984742,-#_0c485e41676628ed0a5ff3a62ba447f8p14@BAIAP2L1
1.34e-40FFCP PHASE2:Hg19::chr3:189654013..189654016,-#_0c485e41676628ed0a5ff3a62ba447f8p@chr3:189654013..189654016, -
2.01e-40FFCP PHASE1:Hg19::chr17:38652332..38652344,-#_047437d271e666fc1eab40874109dd43p18@TNS4
2.01e-40FFCP PHASE2:Hg19::chr2:131669803..131669810,+#_047437d271e666fc1eab40874109dd43p@chr2:131669803..131669810, +
2.01e-40FFCP PHASE2:Hg19::chr17:38652332..38652344,-#_047437d271e666fc1eab40874109dd43p18@TNS4
2.01e-40FFCP PHASE1:Hg19::chr2:131669803..131669810,+#_047437d271e666fc1eab40874109dd43p@chr2:131669803..131669810, +
2.46e-40FFCP PHASE2:Hg19::chr9:27524537..27524559,+#_42a20eebe045269fd4c0c3130890dffbp1@IFNK
2.46e-40FFCP PHASE1:Hg19::chr9:27524537..27524559,+#_42a20eebe045269fd4c0c3130890dffbp1@IFNK
5.49e-40FFCP PHASE2:Hg19::chr5:134906500..134906526,+#_c470d3b881d5c8bd29512f952d87b830p@chr5:134906500..134906526, +
5.49e-40FFCP PHASE1:Hg19::chr5:134906500..134906526,+#_c470d3b881d5c8bd29512f952d87b830p@chr5:134906500..134906526, +
1.89e-37FFCP PHASE1:Hg19::chr5:167247103..167247112,+#_f9154dd3c9de2420d576ffd1ca262e6bp@chr5:167247103..167247112, +
1.89e-37FFCP PHASE2:Hg19::chr5:167247103..167247112,+#_f9154dd3c9de2420d576ffd1ca262e6bp@chr5:167247103..167247112, +
4.73e-37FFCP PHASE2:Hg19::chr5:52619638..52619641,+#_ebf1d599184c0b60402fa2daf7082372p@chr5:52619638..52619641, +
4.73e-37FFCP PHASE1:Hg19::chr5:52619638..52619641,+#_ebf1d599184c0b60402fa2daf7082372p@chr5:52619638..52619641, +
1.18e-36FFCP PHASE2:Hg19::chr19:44306567..44306574,-#_df665784a17ee58c0bc91505def63387p7@LYPD5
1.18e-36FFCP PHASE1:Hg19::chr19:44306567..44306574,-#_df665784a17ee58c0bc91505def63387p7@LYPD5
1.42e-36FFCP PHASE2:Hg19::chr14:51955760..51955769,+#_3676c379202266b441b794a62be7c642p29@FRMD6
1.42e-36FFCP PHASE1:Hg19::chr14:51955760..51955769,+#_3676c379202266b441b794a62be7c642p29@FRMD6
1.7e-36FFCP PHASE2:Hg19::chr2:213770576..213770587,+#_ebcc9833d42ead904b006c56f6ed22fep@chr2:213770576..213770587, +
1.7e-36FFCP PHASE1:Hg19::chr2:213770576..213770587,+#_ebcc9833d42ead904b006c56f6ed22fep@chr2:213770576..213770587, +
2.04e-36FFCP PHASE2:Hg19::chr13:30259768..30259777,+#_38a6966f4190a00fc168a87c50453cafp@chr13:30259768..30259777, +
2.04e-36FFCP PHASE1:Hg19::chr13:30259768..30259777,+#_38a6966f4190a00fc168a87c50453cafp@chr13:30259768..30259777, +
2.45e-36FFCP PHASE2:Hg19::chr2:62257232..62257274,+#_5fefaef0f31995b0cafc1bab38c7499ap@chr2:62257232..62257274, +
2.45e-36FFCP PHASE1:Hg19::chr2:62257232..62257274,+#_5fefaef0f31995b0cafc1bab38c7499ap@chr2:62257232..62257274, +
3.61e-34FFCP PHASE2:Hg19::chr5:93905715..93905716,+#_566e25c837133ddd6cb03e761c0f2ba1p2@uc003kkq.1
3.61e-34FFCP PHASE1:Hg19::chr5:93905715..93905716,+#_566e25c837133ddd6cb03e761c0f2ba1p2@uc003kkq.1
5.04e-34FFCP PHASE2:Hg19::chr16:57954541..57954548,-#_4ac3b6cb14953c04bb913738422076c8p@chr16:57954541..57954548, -
5.04e-34FFCP PHASE2:Hg19::chr5:64400723..64400730,-#_4ac3b6cb14953c04bb913738422076c8p@chr5:64400723..64400730, -
5.04e-34FFCP PHASE1:Hg19::chr16:57954541..57954548,-#_4ac3b6cb14953c04bb913738422076c8p@chr16:57954541..57954548, -
5.04e-34FFCP PHASE1:Hg19::chr5:64400723..64400730,-#_4ac3b6cb14953c04bb913738422076c8p@chr5:64400723..64400730, -
7.05e-34FFCP PHASE2:Hg19::chr4:87770064..87770069,-#_ca99dae93b34019b1ec55a003824928fp13@SLC10A6
7.05e-34FFCP PHASE1:Hg19::chr4:87770064..87770069,-#_ca99dae93b34019b1ec55a003824928fp13@SLC10A6
7.05e-34FFCP PHASE2:Hg19::chr4:44963669..44963674,+#_ca99dae93b34019b1ec55a003824928fp@chr4:44963669..44963674, +
7.05e-34FFCP PHASE1:Hg19::chr4:44963669..44963674,+#_ca99dae93b34019b1ec55a003824928fp@chr4:44963669..44963674, +
7.05e-34FFCP PHASE2:Hg19::chr19:1611369..1611372,-#_ca99dae93b34019b1ec55a003824928fp13@TCF3
7.05e-34FFCP PHASE2:Hg19::chr7:17719182..17719193,-#_ca99dae93b34019b1ec55a003824928fp@chr7:17719182..17719193, -
7.05e-34FFCP PHASE1:Hg19::chr7:17719182..17719193,-#_ca99dae93b34019b1ec55a003824928fp@chr7:17719182..17719193, -
7.05e-34FFCP PHASE1:Hg19::chr19:1611369..1611372,-#_ca99dae93b34019b1ec55a003824928fp13@TCF3
1.17e-33FFCP PHASE1:Hg19::chr12:28125953..28125964,-#_ab0beb8b1d13af92084ea4d66c3594c3p17@PTHLH
1.17e-33FFCP PHASE2:Hg19::chr12:28125953..28125964,-#_ab0beb8b1d13af92084ea4d66c3594c3p17@PTHLH
1.39e-33FFCP PHASE1:Hg19::chr16:69145093..69145094,+#_703d74bbdf9825e5040ed05d1e4e4179p@chr16:69145093..69145094, +
1.39e-33FFCP PHASE2:Hg19::chr16:69145093..69145094,+#_703d74bbdf9825e5040ed05d1e4e4179p@chr16:69145093..69145094, +
2.29e-33FFCP PHASE1:Hg19::chr11:128812910..128812927,-#_b2a41ccfba1ac238affded155947d6fap2@TP53AIP1
2.29e-33FFCP PHASE2:Hg19::chr11:128812910..128812927,-#_b2a41ccfba1ac238affded155947d6fap2@TP53AIP1
7.33e-32FFCP PHASE1:Hg19::chr17:38120375..38120394,+#_6988c1c8b14aff89fbf47c5cd3e1436bp@chr17:38120375..38120394, +
7.33e-32FFCP PHASE2:Hg19::chr17:38120375..38120394,+#_6988c1c8b14aff89fbf47c5cd3e1436bp@chr17:38120375..38120394, +
1.87e-31FFCP PHASE2:Hg19::chr17:60782123..60782133,+#_7715ff29fa45930fb374f233313de1dbp@chr17:60782123..60782133, +
1.87e-31FFCP PHASE1:Hg19::chr17:60782123..60782133,+#_7715ff29fa45930fb374f233313de1dbp@chr17:60782123..60782133, +
4.04e-31FFCP PHASE1:Hg19::chr11:72295793..72295812,-#_75672c92d0603ea956b68455595543d1p9@PDE2A
4.04e-31FFCP PHASE2:Hg19::chr11:72295793..72295812,-#_75672c92d0603ea956b68455595543d1p9@PDE2A
2.22e-29FFCP PHASE2:Hg19::chr21:44957855..44957891,-#_49e37301ed1babf3b538e5755fabe2e7p@chr21:44957855..44957891, -
2.22e-29FFCP PHASE1:Hg19::chr21:44957855..44957891,-#_49e37301ed1babf3b538e5755fabe2e7p@chr21:44957855..44957891, -
2.56e-29FFCP PHASE2:Hg19::chr17:80037380..80037391,-#_3cf8ba07cdb395fd4a7887495ef973ddp6@BC065179
2.56e-29FFCP PHASE1:Hg19::chr17:80037380..80037391,-#_3cf8ba07cdb395fd4a7887495ef973ddp6@BC065179
3.41e-29FFCP PHASE2:Hg19::chr5:167247213..167247223,+#_44605b7fdb10aec7bcaef56ed443613fp@chr5:167247213..167247223, +
3.41e-29FFCP PHASE1:Hg19::chr5:167247213..167247223,+#_44605b7fdb10aec7bcaef56ed443613fp@chr5:167247213..167247223, +
6.06e-29FFCP PHASE2:Hg19::chr11:93754316..93754353,+#_b1136ae8b4b2f32444252b6eadde9dfbp2@HEPHL1
6.06e-29FFCP PHASE1:Hg19::chr11:93754316..93754353,+#_b1136ae8b4b2f32444252b6eadde9dfbp2@HEPHL1
8.13e-28FFCP PHASE2:Hg19::chr7:40883521..40883532,+#_12a084a26b6d6660a8c09f4109099464p@chr7:40883521..40883532, +
8.13e-28FFCP PHASE1:Hg19::chr7:40883521..40883532,+#_12a084a26b6d6660a8c09f4109099464p@chr7:40883521..40883532, +
1.22e-27FFCP PHASE2:Hg19::chr5:111445067..111445085,-#_0f1a18157c94818f21f167bbdc2a41d8p@chr5:111445067..111445085, -
1.22e-27FFCP PHASE1:Hg19::chr5:111445067..111445085,-#_0f1a18157c94818f21f167bbdc2a41d8p@chr5:111445067..111445085, -
1.6e-27FFCP PHASE2:Hg19::chr7:157086249..157086269,-#_f2ca882cb1d5705647d5aa06922ddfaap@chr7:157086249..157086269, -
1.6e-27FFCP PHASE1:Hg19::chr7:157086249..157086269,-#_f2ca882cb1d5705647d5aa06922ddfaap@chr7:157086249..157086269, -
1.6e-27FFCP PHASE2:Hg19::chr1:209601525..209601530,+#_f2ca882cb1d5705647d5aa06922ddfaap@chr1:209601525..209601530, +
1.6e-27FFCP PHASE1:Hg19::chr1:209601525..209601530,+#_f2ca882cb1d5705647d5aa06922ddfaap@chr1:209601525..209601530, +

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