UBERON:0007280: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0003084 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007280 | |||
|is_a=UBERON:0006598 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=presumptive endocardium | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0005498 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Portion of tissue that is part of the heart tube and will become the endocardium.[TAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Portion of tissue that is part of the heart tube and will become the endocardium.[TAO]" xsd:string | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=TAO:0002233;;ZFA:0001724 | |||
}} | }} | ||
Latest revision as of 18:01, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006598(presumptive structure) |
|---|---|
| develops_from: | UBERON:0003084(heart primordium) |
| part_of: | UBERON:0005498(primitive heart tube) |
Children
| develops from: | UBERON:0002165 (endocardium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007280 (presumptive endocardium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.41e-147 | FFCP PHASE1:Hg19::chr7:25815812..25815822,-#_c5528d4784b7b8104db8314dd5c84f8f | p@chr7:25815812..25815822, - |
| 5.41e-147 | FFCP PHASE2:Hg19::chr7:25815812..25815822,-#_c5528d4784b7b8104db8314dd5c84f8f | p@chr7:25815812..25815822, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr12:3373147..3373149,-#_4aae8a41197b3601c0ebe01b8e71ee71 | p@chr12:3373147..3373149, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr12:3373147..3373149,-#_4aae8a41197b3601c0ebe01b8e71ee71 | p@chr12:3373147..3373149, - |
| 7.78e-118 | FFCP PHASE2:Hg19::chr1:20355975..20355980,-#_a1716617358458056838750d2db81b9a | p@chr1:20355975..20355980, - |
| 7.78e-118 | FFCP PHASE1:Hg19::chr1:20355975..20355980,-#_a1716617358458056838750d2db81b9a | p@chr1:20355975..20355980, - |
| 5.69e-99 | FFCP PHASE1:Hg19::chr1:237331032..237331036,+#_1b8bd0cb924a950297ea8c63e75f8a42 | p@chr1:237331032..237331036, + |
| 5.69e-99 | FFCP PHASE2:Hg19::chr1:237331032..237331036,+#_1b8bd0cb924a950297ea8c63e75f8a42 | p@chr1:237331032..237331036, + |
| 1.52e-87 | FFCP PHASE1:Hg19::chr2:18116344..18116353,+#_75f80a4a0116728622a82e1dcede4c67 | p@chr2:18116344..18116353, + |
| 1.52e-87 | FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_75f80a4a0116728622a82e1dcede4c67 | p9@NPPA |
| 1.52e-87 | FFCP PHASE2:Hg19::chr6:6739548..6739577,-#_75f80a4a0116728622a82e1dcede4c67 | p@chr6:6739548..6739577, - |
| 1.52e-87 | FFCP PHASE2:Hg19::chr2:18116344..18116353,+#_75f80a4a0116728622a82e1dcede4c67 | p@chr2:18116344..18116353, + |
| 1.52e-87 | FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_75f80a4a0116728622a82e1dcede4c67 | p9@NPPA |
| 1.52e-87 | FFCP PHASE1:Hg19::chr6:6739548..6739577,-#_75f80a4a0116728622a82e1dcede4c67 | p@chr6:6739548..6739577, - |
| 7.21e-85 | FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_b47f606f1b64cf0c2502b92520794d65 | p@chrX:112324334..112324339, - |
| 7.21e-85 | FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_b47f606f1b64cf0c2502b92520794d65 | p@chrX:112324334..112324339, - |
| 1.71e-84 | FFCP PHASE2:Hg19::chr2:220491902..220491915,+#_9315bd6992b18066d85a480298b7a135 | p11@SLC4A3 |
| 1.71e-84 | FFCP PHASE1:Hg19::chr2:220491902..220491915,+#_9315bd6992b18066d85a480298b7a135 | p11@SLC4A3 |
| 2.27e-84 | FFCP PHASE1:Hg19::chr2:179533457..179533461,-#_e622cea744db838147ed25b60fe0ec01 | p@chr2:179533457..179533461, - |
| 2.27e-84 | FFCP PHASE2:Hg19::chr2:179533457..179533461,-#_e622cea744db838147ed25b60fe0ec01 | p@chr2:179533457..179533461, - |
| 3.03e-84 | FFCP PHASE1:Hg19::chr2:179398102..179398109,-#_603d333529e8b3e241b1d0782f652750 | p@chr2:179398102..179398109, - |
| 3.03e-84 | FFCP PHASE2:Hg19::chr2:179398102..179398109,-#_603d333529e8b3e241b1d0782f652750 | p@chr2:179398102..179398109, - |
| 7.81e-75 | FFCP PHASE1:Hg19::chr5:123739302..123739319,-#_058e5ded3b17b66dd73b6d033d29722c | p@chr5:123739302..123739319, - |
| 7.81e-75 | FFCP PHASE2:Hg19::chr5:123739302..123739319,-#_058e5ded3b17b66dd73b6d033d29722c | p@chr5:123739302..123739319, - |
| 1.01e-74 | FFCP PHASE1:Hg19::chr18:64271475..64271484,-#_8e2a1d76308cd7231db8b9ce61c478c3 | p6@CDH19 |
| 1.01e-74 | FFCP PHASE2:Hg19::chr18:64271475..64271484,-#_8e2a1d76308cd7231db8b9ce61c478c3 | p6@CDH19 |
| 1.29e-74 | FFCP PHASE2:Hg19::chr7:35286774..35286778,-#_b5c4ef03e5a32f5ad89baef2f40b0ad7 | p@chr7:35286774..35286778, - |
| 1.29e-74 | FFCP PHASE1:Hg19::chr7:35286774..35286778,-#_b5c4ef03e5a32f5ad89baef2f40b0ad7 | p@chr7:35286774..35286778, - |
| 1.66e-74 | FFCP PHASE1:Hg19::chr6:129355052..129355056,+#_c0625d854609e2066c8f0156d1a92a02 | p@chr6:129355052..129355056, + |
| 1.66e-74 | FFCP PHASE2:Hg19::chr6:129355052..129355056,+#_c0625d854609e2066c8f0156d1a92a02 | p@chr6:129355052..129355056, + |
| 2.75e-74 | FFCP PHASE1:Hg19::chr3:16940540..16940554,+#_dba0651490418cb7db11d8b6732b90b0 | p@chr3:16940540..16940554, + |
| 2.75e-74 | FFCP PHASE2:Hg19::chr3:16940540..16940554,+#_dba0651490418cb7db11d8b6732b90b0 | p@chr3:16940540..16940554, + |
| 3.54e-74 | FFCP PHASE2:Hg19::chr3:131523446..131523459,-#_c62c8ab00721d2c3b3b4cd89168aa484 | p@chr3:131523446..131523459, - |
| 3.54e-74 | FFCP PHASE1:Hg19::chr20:33565465..33565475,+#_c62c8ab00721d2c3b3b4cd89168aa484 | p9@MYH7B |
| 3.54e-74 | FFCP PHASE2:Hg19::chr20:33565465..33565475,+#_c62c8ab00721d2c3b3b4cd89168aa484 | p9@MYH7B |
| 3.54e-74 | FFCP PHASE1:Hg19::chr19:55661803..55661807,-#_c62c8ab00721d2c3b3b4cd89168aa484 | p@chr19:55661803..55661807, - |
| 3.54e-74 | FFCP PHASE2:Hg19::chr1:201328779..201328797,-#_c62c8ab00721d2c3b3b4cd89168aa484 | p@chr1:201328779..201328797, - |
| 3.54e-74 | FFCP PHASE1:Hg19::chr3:131523446..131523459,-#_c62c8ab00721d2c3b3b4cd89168aa484 | p@chr3:131523446..131523459, - |
| 3.54e-74 | FFCP PHASE2:Hg19::chr19:55661803..55661807,-#_c62c8ab00721d2c3b3b4cd89168aa484 | p@chr19:55661803..55661807, - |
| 3.54e-74 | FFCP PHASE1:Hg19::chr1:201328779..201328797,-#_c62c8ab00721d2c3b3b4cd89168aa484 | p@chr1:201328779..201328797, - |
| 5.84e-74 | FFCP PHASE2:Hg19::chr6:36812121..36812130,-#_d2c330d2f39c7dc3fe8c3b10d95586d0 | p@chr6:36812121..36812130, - |
| 5.84e-74 | FFCP PHASE1:Hg19::chr6:36812121..36812130,-#_d2c330d2f39c7dc3fe8c3b10d95586d0 | p@chr6:36812121..36812130, - |
| 7.51e-74 | FFCP PHASE2:Hg19::chr14:105939326..105939337,+#_ecb49828863b7a8979e3eb7c7c8d9db0 | p16@CRIP2 |
| 7.51e-74 | FFCP PHASE1:Hg19::chr14:105939326..105939337,+#_ecb49828863b7a8979e3eb7c7c8d9db0 | p16@CRIP2 |
| 9.64e-74 | FFCP PHASE2:Hg19::chr1:206838422..206838456,+#_f5a17b3cd0f6a0c0ec66660c8238ae46 | p@chr1:206838422..206838456, + |
| 9.64e-74 | FFCP PHASE1:Hg19::chr1:206838422..206838456,+#_f5a17b3cd0f6a0c0ec66660c8238ae46 | p@chr1:206838422..206838456, + |
| 1.24e-73 | FFCP PHASE2:Hg19::chr1:231983543..231983554,-#_40c87023761f09febbcbfaf1258653c5 | p@chr1:231983543..231983554, - |
| 1.24e-73 | FFCP PHASE1:Hg19::chr1:231983543..231983554,-#_40c87023761f09febbcbfaf1258653c5 | p@chr1:231983543..231983554, - |
| 1.54e-66 | FFCP PHASE2:Hg19::chr1:201328328..201328343,-#_0101a29318324d38da98d89d63878caa | p@chr1:201328328..201328343, - |
| 1.54e-66 | FFCP PHASE1:Hg19::chr1:201328328..201328343,-#_0101a29318324d38da98d89d63878caa | p@chr1:201328328..201328343, - |
| 1.71e-66 | FFCP PHASE1:Hg19::chr1:237214095..237214115,+#_1017cdb0dbb13cb2bc28d4a88de858b8 | p@chr1:237214095..237214115, + |
| 1.71e-66 | FFCP PHASE2:Hg19::chr11:47367243..47367257,-#_1017cdb0dbb13cb2bc28d4a88de858b8 | p@chr11:47367243..47367257, - |
| 1.71e-66 | FFCP PHASE1:Hg19::chr11:47367243..47367257,-#_1017cdb0dbb13cb2bc28d4a88de858b8 | p@chr11:47367243..47367257, - |
| 1.71e-66 | FFCP PHASE2:Hg19::chr1:237214095..237214115,+#_1017cdb0dbb13cb2bc28d4a88de858b8 | p@chr1:237214095..237214115, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_fb6eb866e478cad996752a56426398b6 | p@chr5:99390735..99390743, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_fb6eb866e478cad996752a56426398b6 | p@chr15:86272097..86272099, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_fb6eb866e478cad996752a56426398b6 | p@chr10:92678409..92678410, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_fb6eb866e478cad996752a56426398b6 | p@chr5:99390735..99390743, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_fb6eb866e478cad996752a56426398b6 | p@chr15:86272097..86272099, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_fb6eb866e478cad996752a56426398b6 | p@chr10:92678409..92678410, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr12:4735761..4735787,-#_7adb54ab7e1b0fdc443f7465b64291cb | p@chr12:4735761..4735787, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr12:4735761..4735787,-#_7adb54ab7e1b0fdc443f7465b64291cb | p@chr12:4735761..4735787, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr2:159976509..159976519,+#_7adb54ab7e1b0fdc443f7465b64291cb | p@chr2:159976509..159976519, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr1:237996521..237996532,+#_7adb54ab7e1b0fdc443f7465b64291cb | p@chr1:237996521..237996532, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr12:114886577..114886589,-#_7adb54ab7e1b0fdc443f7465b64291cb | p@chr12:114886577..114886589, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr2:159976509..159976519,+#_7adb54ab7e1b0fdc443f7465b64291cb | p@chr2:159976509..159976519, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr12:114886577..114886589,-#_7adb54ab7e1b0fdc443f7465b64291cb | p@chr12:114886577..114886589, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr1:237996521..237996532,+#_7adb54ab7e1b0fdc443f7465b64291cb | p@chr1:237996521..237996532, + |
| 2.41e-66 | FFCP PHASE1:Hg19::chr1:237207955..237207959,+#_96165e489fd22f0ae888d8c05c2d660c | p@chr1:237207955..237207959, + |
| 2.41e-66 | FFCP PHASE2:Hg19::chr2:40480968..40480972,-#_96165e489fd22f0ae888d8c05c2d660c | p@chr2:40480968..40480972, - |
| 2.41e-66 | FFCP PHASE2:Hg19::chr1:237207955..237207959,+#_96165e489fd22f0ae888d8c05c2d660c | p@chr1:237207955..237207959, + |
| 2.41e-66 | FFCP PHASE1:Hg19::chr2:40480968..40480972,-#_96165e489fd22f0ae888d8c05c2d660c | p@chr2:40480968..40480972, - |
| 3.01e-66 | FFCP PHASE2:Hg19::chr4:62999501..62999517,+#_28c141bdcb1358e39a4c802eb4d1b2d3 | p@chr4:62999501..62999517, + |
| 3.01e-66 | FFCP PHASE1:Hg19::chr4:62999501..62999517,+#_28c141bdcb1358e39a4c802eb4d1b2d3 | p@chr4:62999501..62999517, + |
| 3.35e-66 | FFCP PHASE1:Hg19::chr7:35253487..35253489,-#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr7:35253487..35253489, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr7:44179972..44179982,-#_c0a8255af6d76deb566e4e76c41bb7cf | p2@MYL7 |
| 3.35e-66 | FFCP PHASE1:Hg19::chr1:11905830..11905839,-#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr1:11905830..11905839, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr9:38650254..38650266,+#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr9:38650254..38650266, + |
| 3.35e-66 | FFCP PHASE1:Hg19::chr7:44178491..44178498,-#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr7:44178491..44178498, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr5:65736120..65736128,-#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr5:65736120..65736128, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr7:35253487..35253489,-#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr7:35253487..35253489, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr1:11905830..11905839,-#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr1:11905830..11905839, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr7:44179972..44179982,-#_c0a8255af6d76deb566e4e76c41bb7cf | p2@MYL7 |
| 3.35e-66 | FFCP PHASE2:Hg19::chr9:38650254..38650266,+#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr9:38650254..38650266, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr7:44178491..44178498,-#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr7:44178491..44178498, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr5:65736120..65736128,-#_c0a8255af6d76deb566e4e76c41bb7cf | p@chr5:65736120..65736128, - |
| 4.68e-66 | FFCP PHASE1:Hg19::chr7:44180643..44180652,-#_41fc28e6a69562eaaab2272ee73316b8 | p3@MYL7 |
| 4.68e-66 | FFCP PHASE1:Hg19::chr10:112524543..112524547,+#_41fc28e6a69562eaaab2272ee73316b8 | p@chr10:112524543..112524547, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chr10:112524543..112524547,+#_41fc28e6a69562eaaab2272ee73316b8 | p@chr10:112524543..112524547, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chr7:44180643..44180652,-#_41fc28e6a69562eaaab2272ee73316b8 | p3@MYL7 |
| 5.88e-66 | FFCP PHASE2:Hg19::chr6:36812225..36812238,-#_9c72b3654778dcfdcb4225ad5e2985a2 | p@chr6:36812225..36812238, - |
| 5.88e-66 | FFCP PHASE1:Hg19::chr6:36812225..36812238,-#_9c72b3654778dcfdcb4225ad5e2985a2 | p@chr6:36812225..36812238, - |
| 6.53e-66 | FFCP PHASE2:Hg19::chr2:168104544..168104551,+#_3816f804787c2dd816d7a026e35f64f2 | p52@XIRP2 |
| 6.53e-66 | FFCP PHASE1:Hg19::chr4:62999459..62999462,+#_3816f804787c2dd816d7a026e35f64f2 | p@chr4:62999459..62999462, + |
| 6.53e-66 | FFCP PHASE2:Hg19::chr4:62999459..62999462,+#_3816f804787c2dd816d7a026e35f64f2 | p@chr4:62999459..62999462, + |
| 6.53e-66 | FFCP PHASE1:Hg19::chr2:168104544..168104551,+#_3816f804787c2dd816d7a026e35f64f2 | p52@XIRP2 |
| 1.15e-65 | FFCP PHASE2:Hg19::chr7:123302841..123302854,+#_f5445ca3c0fd9e72b26b612b27e920b0 | p@chr7:123302841..123302854, + |
| 1.15e-65 | FFCP PHASE2:Hg19::chr10:127569398..127569410,-#_f5445ca3c0fd9e72b26b612b27e920b0 | p5@DHX32 |
| 1.15e-65 | FFCP PHASE2:Hg19::chrX:121555838..121555874,+#_f5445ca3c0fd9e72b26b612b27e920b0 | p@chrX:121555838..121555874, + |
| 1.15e-65 | FFCP PHASE1:Hg19::chr7:123302841..123302854,+#_f5445ca3c0fd9e72b26b612b27e920b0 | p@chr7:123302841..123302854, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue that is part of the heart tube and will become the endocardium.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
