UBERON:0007297: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007297 | |||
|is_a=UBERON:0006598 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=presumptive pronephric mesoderm | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="nephron primordium" EXACT [ZFA:0001070] | ||
|union_of= | |||
|xref=EFO:0003619;;TAO:0001070;;ZFA:0001070 | |||
}} | }} | ||
Latest revision as of 18:01, 12 September 2014
| Name: | presumptive pronephric mesoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: | "nephron primordium" EXACT [ZFA:0001070] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006598(presumptive structure) |
|---|
Children
| develops from: | UBERON:0005721 (pronephric mesoderm) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Defb42 |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402d | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402d | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419edd | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419edd | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419edd | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419edd | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419edd | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419edd | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585048..63585062, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517b | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517b | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr14:63627556..63627564, - |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67e | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67e | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562f | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562f | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562f | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562f | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562f | p10@PAX2 |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562f | p@chr1:172416185..172416189, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51670340..51670346,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr14:51670340..51670346, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35651807..35651818,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@9230110F15Rik |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:168436322..168436326, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr6:54359310..54359337,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr6:54359310..54359337, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:148676901..148676906,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p8@9230104L09Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:34107586..34107593, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:156776465..156776473,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:156776465..156776473, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:75866210..75866235,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:75866210..75866235, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr7:151928014..151928021, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:103896072..103896081,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr12:103896072..103896081, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:11079838..11079844, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:90155966..90155989, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr18:46301295..46301302, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379065..21379072,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379065..21379072, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:56469136..56469145,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:56469136..56469145, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164439019..164439029,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p1@Wfdc6b |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:16663110..16663116,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@Ntsr2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr19:24582739..24582748,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr19:24582739..24582748, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:53938008..53938022,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p11@P4ha2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:31507623..31507631,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p4@Atp4a |
| 4.54e-44 | FFCP PHASE2:Mm9::chr3:146278590..146278595,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p10@Dnase2b |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21381141..21381155,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21381141..21381155, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:54678983..54678995,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr15:54678983..54678995, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:124447371..124447383,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:124447371..124447383, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:134913640..134913649,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr4:134913640..134913649, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:165219453..165219469,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p11@Prrx1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:25349414..25349424,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p5@Lcn12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr12:103896072..103896081, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:50280152..50280179,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:50280152..50280179, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:44261480..44261486,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr18:44261480..44261486, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379550..31379559,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:31379550..31379559, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p21@Pgap2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379430..21379437, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19141447..19141469,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:19141447..19141469, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:25677632..25677636,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:25677632..25677636, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31379878..31379883,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:31379878..31379883, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr18:46301295..46301302, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p11@Wars |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p8@9230104L09Rik |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379322..21379338, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:147624258..147624285,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr6:147624258..147624285, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:112721323..112721328, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:14306714..14306740,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr17:14306714..14306740, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:73221062..73221084,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr17:73221062..73221084, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:126591032..126591039, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p2@ENSMUST00000152401 |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:20422498..20422506,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:20422498..20422506, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31377177..31377184,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:31377177..31377184, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:104945515..104945524,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr12:104945515..104945524, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:19062951..19062955, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:89596972..89596981,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:89596972..89596981, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101959159..101959163,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:101959159..101959163, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35651679..35651691,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p5@9230110F15Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21381141..21381155,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21381141..21381155, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:164787162..164787188, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:74440187..74440209, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:56515486..56515496,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr10:56515486..56515496, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr16:22504758..22504766, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:110773718..110773729, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:52542831..52542836,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p4@Rnase13 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:87936213..87936218,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:87936213..87936218, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr14:69143309..69143319, - |
