UBERON:0007844: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0007844
|name=cartilaginous element
|namespace=
|def="Skeletal element that is composed of cartilage tissue and may be permanent or transient." [VSAO:c...") |
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=AO notes: TAO still mixes tissue and element | |comment=AO notes: TAO still mixes tissue and element | ||
|created_by= | |created_by= | ||
| | |def="Skeletal element that is composed of cartilage tissue and may be permanent or transient." [VSAO:curator] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0005863 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007844 | |||
|is_a=UBERON:0004765 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=cartilage element | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=organ_slim | ||
| | |synonym="cartilage" RELATED [VSAO:0000000];;"cartilage element" EXACT [];;"cartilage organ" EXACT [FMA:55107];;"chondrogenic element" EXACT [VSAO:0000000] | ||
|union_of= | |||
|xref=AAO:0011130;;FMA:55107;;VSAO:0000000;;XAO:0004013;;ZFA:0001501 | |||
}} | }} |
Latest revision as of 18:03, 12 September 2014
Name: | cartilage element | |
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Namespace: | FANTOM | |
Definition: | "Skeletal element that is composed of cartilage tissue and may be permanent or transient." [VSAO:curator] | |
Xrefs: |
| |
Synonyms: |
"cartilage" RELATED [VSAO:0000000] "cartilage element" EXACT [] "cartilage organ" EXACT [FMA:55107] "chondrogenic element" EXACT [VSAO:0000000] | |
Comments: | AO notes: TAO still mixes tissue and element | |
Subset: | organ_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004765(skeletal element) |
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develops_from: | UBERON:0005863(cartilaginous condensation) |
Children
is a: | UBERON:0010885 (hindlimb cartilage element),UBERON:0011135 (intervertebral cartilage) |
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develops from: | UBERON:0002513 (endochondral bone) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11252-116F1 (Nucleus Pulposus Cell, donor1)
- 11409-118E5 (Nucleus Pulposus Cell, donor2)
- 11462-119B4 (Nucleus Pulposus Cell, donor3)
- 11463-119B5 (Anulus Pulposus Cell, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007844 (cartilage element), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data