UBERON:0010259: Difference between revisions
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(Created page with "{{UBERON
|id=UBERON:0010259
|name=1st arch mesenchyme from neural crest
|namespace=
|def=
|xref=EMAPA:16129
|is_a=UBERON:0010042;;UBERON:0010258;;UBERON:0010359
|synony...") |
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0002342;;UBERON:0003852 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0010259 | |||
|is_a=UBERON:0010042 ;;UBERON:0010258 ;;UBERON:0010359 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=1st arch mesenchyme from neural crest | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0010042 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="mesenchyme derived from neural crest of mesenchyme of 1st arch" EXACT [EMAPA:16129] | ||
|union_of= | |||
|xref=EMAPA:16129 | |||
}} | }} | ||
Latest revision as of 18:08, 12 September 2014
| Name: | 1st arch mesenchyme from neural crest | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: | "mesenchyme derived from neural crest of mesenchyme of 1st arch" EXACT [EMAPA:16129] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0010042(1st arch mesenchyme),UBERON:0010258(mesenchyme from rhombencephalic neural crest),UBERON:0010359(pharyngeal arch mesenchyme from neural crest) |
|---|---|
| develops_from: | UBERON:0002342(neural crest),UBERON:0003852(rhombencephalon neural crest) |
| part_of: | UBERON:0010042(1st arch mesenchyme) |
Children
| is a: | UBERON:0010253 (1st arch maxillary mesenchyme from neural crest) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010259 (1st arch mesenchyme from neural crest), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_ef376105729634ca6f1ed5c3b6da6b3e | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_ef376105729634ca6f1ed5c3b6da6b3e | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_bdbf4964c7f6063047be44e89e9e6ebf | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_bdbf4964c7f6063047be44e89e9e6ebf | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_bdbf4964c7f6063047be44e89e9e6ebf | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_bdbf4964c7f6063047be44e89e9e6ebf | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_bdbf4964c7f6063047be44e89e9e6ebf | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_bdbf4964c7f6063047be44e89e9e6ebf | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_bdbf4964c7f6063047be44e89e9e6ebf | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_bdbf4964c7f6063047be44e89e9e6ebf | p11@C17orf67 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_a3209e5daa4d0da189d2a65b225bcc95 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_a3209e5daa4d0da189d2a65b225bcc95 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_a3209e5daa4d0da189d2a65b225bcc95 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_a3209e5daa4d0da189d2a65b225bcc95 | p14@MAB21L2 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_fe3aa8c4c1eedb1c8694ebed264e7188 | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_fe3aa8c4c1eedb1c8694ebed264e7188 | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_a8c6c6cf6747d6eb05ebc74c79411ec6 | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_a8c6c6cf6747d6eb05ebc74c79411ec6 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_a8c6c6cf6747d6eb05ebc74c79411ec6 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_a8c6c6cf6747d6eb05ebc74c79411ec6 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_a8c6c6cf6747d6eb05ebc74c79411ec6 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_a8c6c6cf6747d6eb05ebc74c79411ec6 | p17@RSRC1 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_804fb6decbaf9e0e8fffdc6307aeebf9 | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_804fb6decbaf9e0e8fffdc6307aeebf9 | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_b5b2b3e34047ed94275435e138a1088c | p1@AK123925 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_b5b2b3e34047ed94275435e138a1088c | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_b5b2b3e34047ed94275435e138a1088c | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_b5b2b3e34047ed94275435e138a1088c | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_b5b2b3e34047ed94275435e138a1088c | p7@ALX1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_b5b2b3e34047ed94275435e138a1088c | p7@ALX1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_0cc762af859aecb4855422156ed041da | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_0cc762af859aecb4855422156ed041da | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_0cc762af859aecb4855422156ed041da | p23@FLT1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_0cc762af859aecb4855422156ed041da | p23@FLT1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_33f3c3af2119bf843d8df7767bd32e98 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_33f3c3af2119bf843d8df7767bd32e98 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_33f3c3af2119bf843d8df7767bd32e98 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_33f3c3af2119bf843d8df7767bd32e98 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_33f3c3af2119bf843d8df7767bd32e98 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_33f3c3af2119bf843d8df7767bd32e98 | p@chr8:57353779..57353790, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_d75f0bcfa7d92ee8deaab901eaca8b1f | p8@LHX8 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_d75f0bcfa7d92ee8deaab901eaca8b1f | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_d75f0bcfa7d92ee8deaab901eaca8b1f | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_d75f0bcfa7d92ee8deaab901eaca8b1f | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_d75f0bcfa7d92ee8deaab901eaca8b1f | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_d75f0bcfa7d92ee8deaab901eaca8b1f | p2@TAS1R1 |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_6b6003cd0a32bad4d8b1ff3ba50cd04c | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_6b6003cd0a32bad4d8b1ff3ba50cd04c | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_6b6003cd0a32bad4d8b1ff3ba50cd04c | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_6b6003cd0a32bad4d8b1ff3ba50cd04c | p@chr5:75912831..75912842, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_a6485e2e079fc79bad3004dc23c76445 | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_a6485e2e079fc79bad3004dc23c76445 | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_a6485e2e079fc79bad3004dc23c76445 | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_a6485e2e079fc79bad3004dc23c76445 | p@chr9:125165007..125165016, + |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_7dd13ab4ba55e4f44c846864b5f82c77 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_7dd13ab4ba55e4f44c846864b5f82c77 | p5@PENK |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_7dd13ab4ba55e4f44c846864b5f82c77 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_7dd13ab4ba55e4f44c846864b5f82c77 | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_7dd13ab4ba55e4f44c846864b5f82c77 | p4@CPZ |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_7dd13ab4ba55e4f44c846864b5f82c77 | p4@CPZ |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_19efaa242011a718a0e7bd61b050ff14 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_19efaa242011a718a0e7bd61b050ff14 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_d69a7051e590b5f3fd6230e059d20678 | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_d69a7051e590b5f3fd6230e059d20678 | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_e3064a25d82b32b8f9690eb302420e6e | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_e3064a25d82b32b8f9690eb302420e6e | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_e3064a25d82b32b8f9690eb302420e6e | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_e3064a25d82b32b8f9690eb302420e6e | p@chr13:58291223..58291226, + |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_deb6d05bc958c63474676ec77611b60f | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_deb6d05bc958c63474676ec77611b60f | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_deb6d05bc958c63474676ec77611b60f | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_deb6d05bc958c63474676ec77611b60f | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_deb6d05bc958c63474676ec77611b60f | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_deb6d05bc958c63474676ec77611b60f | p4@PLAC1 |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_8208bcb4b4ffb8899759925754e7b2c6 | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_8208bcb4b4ffb8899759925754e7b2c6 | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_8208bcb4b4ffb8899759925754e7b2c6 | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_8208bcb4b4ffb8899759925754e7b2c6 | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_8208bcb4b4ffb8899759925754e7b2c6 | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_8208bcb4b4ffb8899759925754e7b2c6 | p@chr8:57353804..57353821, - |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_5d1689a4459f2fed4858d241ede781bf | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_5d1689a4459f2fed4858d241ede781bf | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_5d1689a4459f2fed4858d241ede781bf | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_5d1689a4459f2fed4858d241ede781bf | p7@SHOX2 |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_d0d5a05670a49a37c220472e05bd21af | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_d0d5a05670a49a37c220472e05bd21af | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_d0d5a05670a49a37c220472e05bd21af | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_d0d5a05670a49a37c220472e05bd21af | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_d0d5a05670a49a37c220472e05bd21af | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_d0d5a05670a49a37c220472e05bd21af | p@chr22:28193943..28193956, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_1e651e95c48328ed03228d5eabbef92e | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_1e651e95c48328ed03228d5eabbef92e | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_20c06c85e5b828fb360116261e2e9ac6 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_20c06c85e5b828fb360116261e2e9ac6 | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_20c06c85e5b828fb360116261e2e9ac6 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_20c06c85e5b828fb360116261e2e9ac6 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_20c06c85e5b828fb360116261e2e9ac6 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_20c06c85e5b828fb360116261e2e9ac6 | p18@MEF2D |
| 4.2e-29 | FFCP PHASE2:Hg19::chr1:6615468..6615485,+#_3503481c68358f87a1dedefedfa30ce3 | p1@TAS1R1 |
| 4.2e-29 | FFCP PHASE1:Hg19::chr4:151503350..151503358,+#_3503481c68358f87a1dedefedfa30ce3 | p11@MAB21L2 |
