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{{CL
{{CL
|id=CL:0000069
|alt_id=
|name=branched duct epithelial cell
|namespace=cell
|def=
|xref=
|is_a=CL:0000068
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000069
|is_a=CL:0000068
|is_obsolete=
|located_in=
|located_in=
|name=branched duct epithelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
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|xref=
}}
}}

Latest revision as of 16:29, 12 September 2014

Name:branched duct epithelial cell
Namespace:FANTOM


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000068(duct epithelial cell)



Children


is a:CL:0000377 (tracheoblast),CL:0002538 (intrahepatic bile duct epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000069 (branched duct epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr3:89487103..89487111,-#_9928b648b66357236a41e9efdc9ab1dfp@chr3:89487103..89487111, -
1.58e-86FFCP PHASE2:Mm9::chr11:4165247..4165267,+#_9928b648b66357236a41e9efdc9ab1dfp@chr11:4165247..4165267, +
1.58e-86FFCP PHASE1:Mm9::chr5:91198876..91198885,+#_9928b648b66357236a41e9efdc9ab1dfp@chr5:91198876..91198885, +
1.58e-86FFCP PHASE1:Mm9::chr4:88696177..88696184,+#_9928b648b66357236a41e9efdc9ab1dfp2@Gm12603
1.58e-86FFCP PHASE2:Mm9::chr11:100006864..100006873,+#_9928b648b66357236a41e9efdc9ab1dfp@chr11:100006864..100006873, +
1.58e-86FFCP PHASE2:Mm9::chr9:110941233..110941240,+#_9928b648b66357236a41e9efdc9ab1dfp@chr9:110941233..110941240, +
1.58e-86FFCP PHASE2:Mm9::chr5:135420996..135421000,+#_9928b648b66357236a41e9efdc9ab1dfp@chr5:135420996..135421000, +
1.58e-86FFCP PHASE1:Mm9::chr1:108303887..108303893,+#_9928b648b66357236a41e9efdc9ab1dfp@chr1:108303887..108303893, +
1.58e-86FFCP PHASE1:Mm9::chr2:164393992..164394012,-#_9928b648b66357236a41e9efdc9ab1dfp@chr2:164393992..164394012, -
1.58e-86FFCP PHASE2:Mm9::chr13:72401408..72401416,-#_9928b648b66357236a41e9efdc9ab1dfp@chr13:72401408..72401416, -
1.58e-86FFCP PHASE2:Mm9::chr1:151954385..151954387,+#_9928b648b66357236a41e9efdc9ab1dfp@chr1:151954385..151954387, +
1.58e-86FFCP PHASE1:Mm9::chr11:4165247..4165267,+#_9928b648b66357236a41e9efdc9ab1dfp@chr11:4165247..4165267, +
1.58e-86FFCP PHASE2:Mm9::chr5:135422125..135422141,-#_9928b648b66357236a41e9efdc9ab1dfp@chr5:135422125..135422141, -
1.58e-86FFCP PHASE1:Mm9::chr17:25885558..25885567,+#_9928b648b66357236a41e9efdc9ab1dfp@chr17:25885558..25885567, +
1.58e-86FFCP PHASE2:Mm9::chr6:147205603..147205610,+#_9928b648b66357236a41e9efdc9ab1dfp@chr6:147205603..147205610, +
1.58e-86FFCP PHASE2:Mm9::chr13:115644652..115644657,-#_9928b648b66357236a41e9efdc9ab1dfp@chr13:115644652..115644657, -
1.58e-86FFCP PHASE1:Mm9::chr11:86461733..86461747,-#_9928b648b66357236a41e9efdc9ab1dfp@chr11:86461733..86461747, -
1.58e-86FFCP PHASE1:Mm9::chr5:91199084..91199088,-#_9928b648b66357236a41e9efdc9ab1dfp@chr5:91199084..91199088, -
1.58e-86FFCP PHASE2:Mm9::chr9:110941246..110941254,+#_9928b648b66357236a41e9efdc9ab1dfp@chr9:110941246..110941254, +
1.58e-86FFCP PHASE2:Mm9::chr2:164389604..164389615,+#_9928b648b66357236a41e9efdc9ab1dfp@chr2:164389604..164389615, +
1.58e-86FFCP PHASE2:Mm9::chr4:88696144..88696152,+#_9928b648b66357236a41e9efdc9ab1dfp3@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr13:115722413..115722430,+#_9928b648b66357236a41e9efdc9ab1dfp@chr13:115722413..115722430, +
1.58e-86FFCP PHASE1:Mm9::chr4:88563185..88563192,-#_9928b648b66357236a41e9efdc9ab1dfp@chr4:88563185..88563192, -
1.58e-86FFCP PHASE2:Mm9::chr6:147205677..147205683,+#_9928b648b66357236a41e9efdc9ab1dfp@chr6:147205677..147205683, +
1.58e-86FFCP PHASE1:Mm9::chr5:135422125..135422141,-#_9928b648b66357236a41e9efdc9ab1dfp@chr5:135422125..135422141, -
1.58e-86FFCP PHASE1:Mm9::chr13:72401408..72401416,-#_9928b648b66357236a41e9efdc9ab1dfp@chr13:72401408..72401416, -
1.58e-86FFCP PHASE1:Mm9::chr1:151954385..151954387,+#_9928b648b66357236a41e9efdc9ab1dfp@chr1:151954385..151954387, +
1.58e-86FFCP PHASE1:Mm9::chr11:100006864..100006873,+#_9928b648b66357236a41e9efdc9ab1dfp@chr11:100006864..100006873, +
1.58e-86FFCP PHASE2:Mm9::chr2:164393992..164394012,-#_9928b648b66357236a41e9efdc9ab1dfp@chr2:164393992..164394012, -
1.58e-86FFCP PHASE2:Mm9::chr15:101258041..101258052,+#_9928b648b66357236a41e9efdc9ab1dfp@chr15:101258041..101258052, +
1.58e-86FFCP PHASE1:Mm9::chr11:96608719..96608730,-#_9928b648b66357236a41e9efdc9ab1dfp1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE2:Mm9::chr1:108303887..108303893,+#_9928b648b66357236a41e9efdc9ab1dfp@chr1:108303887..108303893, +
1.58e-86FFCP PHASE1:Mm9::chr5:135420996..135421000,+#_9928b648b66357236a41e9efdc9ab1dfp@chr5:135420996..135421000, +
1.58e-86FFCP PHASE2:Mm9::chr4:88696177..88696184,+#_9928b648b66357236a41e9efdc9ab1dfp2@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr12:17549752..17549763,+#_9928b648b66357236a41e9efdc9ab1dfp@chr12:17549752..17549763, +
1.58e-86FFCP PHASE1:Mm9::chr6:147205603..147205610,+#_9928b648b66357236a41e9efdc9ab1dfp@chr6:147205603..147205610, +
1.58e-86FFCP PHASE2:Mm9::chr2:60538178..60538182,-#_9928b648b66357236a41e9efdc9ab1dfp@chr2:60538178..60538182, -
1.58e-86FFCP PHASE2:Mm9::chr5:91198876..91198885,+#_9928b648b66357236a41e9efdc9ab1dfp@chr5:91198876..91198885, +
1.58e-86FFCP PHASE1:Mm9::chr16:32641594..32641601,+#_9928b648b66357236a41e9efdc9ab1dfp@chr16:32641594..32641601, +
1.58e-86FFCP PHASE2:Mm9::chr17:25885558..25885567,+#_9928b648b66357236a41e9efdc9ab1dfp@chr17:25885558..25885567, +
1.58e-86FFCP PHASE2:Mm9::chr13:115722413..115722430,+#_9928b648b66357236a41e9efdc9ab1dfp@chr13:115722413..115722430, +
1.58e-86FFCP PHASE1:Mm9::chr9:110941233..110941240,+#_9928b648b66357236a41e9efdc9ab1dfp@chr9:110941233..110941240, +
1.58e-86FFCP PHASE2:Mm9::chr16:32641594..32641601,+#_9928b648b66357236a41e9efdc9ab1dfp@chr16:32641594..32641601, +
1.58e-86FFCP PHASE2:Mm9::chr4:88563185..88563192,-#_9928b648b66357236a41e9efdc9ab1dfp@chr4:88563185..88563192, -
1.58e-86FFCP PHASE2:Mm9::chr6:147338308..147338339,-#_9928b648b66357236a41e9efdc9ab1dfp@chr6:147338308..147338339, -
1.58e-86FFCP PHASE2:Mm9::chr11:96608719..96608730,-#_9928b648b66357236a41e9efdc9ab1dfp1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE2:Mm9::chr12:17549752..17549763,+#_9928b648b66357236a41e9efdc9ab1dfp@chr12:17549752..17549763, +
1.58e-86FFCP PHASE1:Mm9::chr4:88696144..88696152,+#_9928b648b66357236a41e9efdc9ab1dfp3@Gm12603
1.58e-86FFCP PHASE2:Mm9::chr3:89487103..89487111,-#_9928b648b66357236a41e9efdc9ab1dfp@chr3:89487103..89487111, -
1.58e-86FFCP PHASE1:Mm9::chr6:147205677..147205683,+#_9928b648b66357236a41e9efdc9ab1dfp@chr6:147205677..147205683, +
1.58e-86FFCP PHASE2:Mm9::chr5:91199084..91199088,-#_9928b648b66357236a41e9efdc9ab1dfp@chr5:91199084..91199088, -
1.58e-86FFCP PHASE2:Mm9::chr11:86461733..86461747,-#_9928b648b66357236a41e9efdc9ab1dfp@chr11:86461733..86461747, -
1.58e-86FFCP PHASE1:Mm9::chr9:110941246..110941254,+#_9928b648b66357236a41e9efdc9ab1dfp@chr9:110941246..110941254, +
1.58e-86FFCP PHASE1:Mm9::chr2:164389604..164389615,+#_9928b648b66357236a41e9efdc9ab1dfp@chr2:164389604..164389615, +
1.58e-86FFCP PHASE1:Mm9::chr6:147338308..147338339,-#_9928b648b66357236a41e9efdc9ab1dfp@chr6:147338308..147338339, -
1.58e-86FFCP PHASE1:Mm9::chr13:115644652..115644657,-#_9928b648b66357236a41e9efdc9ab1dfp@chr13:115644652..115644657, -
1.58e-86FFCP PHASE1:Mm9::chr2:60538178..60538182,-#_9928b648b66357236a41e9efdc9ab1dfp@chr2:60538178..60538182, -
1.58e-86FFCP PHASE1:Mm9::chr15:101258041..101258052,+#_9928b648b66357236a41e9efdc9ab1dfp@chr15:101258041..101258052, +
1.28e-84FFCP PHASE2:Hg19::chr7:135018332..135018336,+#_5b378c079f647c24034644dd27a351bdp@chr7:135018332..135018336, +
1.28e-84FFCP PHASE1:Hg19::chr7:135018332..135018336,+#_5b378c079f647c24034644dd27a351bdp@chr7:135018332..135018336, +
1.66e-74FFCP PHASE2:Hg19::chr5:52627415..52627422,-#_ea41f0150eb1c91f1439c15aa0aafa78p@chr5:52627415..52627422, -
1.66e-74FFCP PHASE1:Hg19::chr5:52627415..52627422,-#_ea41f0150eb1c91f1439c15aa0aafa78p@chr5:52627415..52627422, -
9.82e-67FFCP PHASE2:Hg19::chr4:74977698..74977700,+#_f00efcfcd0d06c0a2fefd73e1a6bc42bp@chr4:74977698..74977700, +
9.82e-67FFCP PHASE1:Hg19::chr4:74977698..74977700,+#_f00efcfcd0d06c0a2fefd73e1a6bc42bp@chr4:74977698..74977700, +
1.23e-66FFCP PHASE1:Hg19::chr4:26089776..26089781,+#_1814c18d66dee7f85cd03f73f83156f2p@chr4:26089776..26089781, +
1.23e-66FFCP PHASE2:Hg19::chr4:26089776..26089781,+#_1814c18d66dee7f85cd03f73f83156f2p@chr4:26089776..26089781, +
1.71e-66FFCP PHASE2:Hg19::chr5:138751193..138751196,-#_08380f3365dd2fe80931ee00b0f883afp@chr5:138751193..138751196, -
1.71e-66FFCP PHASE1:Hg19::chr5:138751193..138751196,-#_08380f3365dd2fe80931ee00b0f883afp@chr5:138751193..138751196, -
3.35e-66FFCP PHASE1:Hg19::chr11:46934513..46934519,+#_e8b0576faab6bf5d8d5d6a130bf423a5p@chr11:46934513..46934519, +
3.35e-66FFCP PHASE2:Hg19::chr11:46934513..46934519,+#_e8b0576faab6bf5d8d5d6a130bf423a5p@chr11:46934513..46934519, +
1.33e-65FFCP PHASE1:Mm9::chr2:144564146..144564166,+#_49647f3298487cbecee61efc7ef174e2p3@Dtd1
1.33e-65FFCP PHASE1:Mm9::chr3:90392458..90392472,+#_49647f3298487cbecee61efc7ef174e2p@chr3:90392458..90392472, +
1.33e-65FFCP PHASE2:Mm9::chr2:144564146..144564166,+#_49647f3298487cbecee61efc7ef174e2p3@Dtd1
1.33e-65FFCP PHASE2:Mm9::chr6:147212620..147212625,+#_49647f3298487cbecee61efc7ef174e2p@chr6:147212620..147212625, +
1.33e-65FFCP PHASE2:Mm9::chr3:90392458..90392472,+#_49647f3298487cbecee61efc7ef174e2p@chr3:90392458..90392472, +
1.33e-65FFCP PHASE1:Mm9::chr19:47939269..47939279,-#_49647f3298487cbecee61efc7ef174e2p@chr19:47939269..47939279, -
1.33e-65FFCP PHASE1:Mm9::chr14:31386795..31386797,-#_49647f3298487cbecee61efc7ef174e2p@chr14:31386795..31386797, -
1.33e-65FFCP PHASE1:Mm9::chr6:147212620..147212625,+#_49647f3298487cbecee61efc7ef174e2p@chr6:147212620..147212625, +
1.33e-65FFCP PHASE1:Mm9::chr3:121437538..121437546,+#_49647f3298487cbecee61efc7ef174e2p@chr3:121437538..121437546, +
1.33e-65FFCP PHASE2:Mm9::chr3:121437538..121437546,+#_49647f3298487cbecee61efc7ef174e2p@chr3:121437538..121437546, +
1.33e-65FFCP PHASE2:Mm9::chr19:47932377..47932386,-#_49647f3298487cbecee61efc7ef174e2p@chr19:47932377..47932386, -
1.33e-65FFCP PHASE1:Mm9::chrX:20383628..20383635,+#_49647f3298487cbecee61efc7ef174e2p@chrX:20383628..20383635, +
1.33e-65FFCP PHASE1:Mm9::chr19:47932377..47932386,-#_49647f3298487cbecee61efc7ef174e2p@chr19:47932377..47932386, -
1.33e-65FFCP PHASE2:Mm9::chr11:100002128..100002131,+#_49647f3298487cbecee61efc7ef174e2p@chr11:100002128..100002131, +
1.33e-65FFCP PHASE2:Mm9::chr11:29642912..29642916,-#_49647f3298487cbecee61efc7ef174e2p@chr11:29642912..29642916, -
1.33e-65FFCP PHASE1:Mm9::chr11:29642912..29642916,-#_49647f3298487cbecee61efc7ef174e2p@chr11:29642912..29642916, -
1.33e-65FFCP PHASE2:Mm9::chrX:20383628..20383635,+#_49647f3298487cbecee61efc7ef174e2p@chrX:20383628..20383635, +
1.33e-65FFCP PHASE2:Mm9::chr14:31386795..31386797,-#_49647f3298487cbecee61efc7ef174e2p@chr14:31386795..31386797, -
1.33e-65FFCP PHASE1:Mm9::chr3:121437587..121437593,+#_49647f3298487cbecee61efc7ef174e2p@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr19:47939269..47939279,-#_49647f3298487cbecee61efc7ef174e2p@chr19:47939269..47939279, -
1.33e-65FFCP PHASE2:Mm9::chr3:121437587..121437593,+#_49647f3298487cbecee61efc7ef174e2p@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr14:34905716..34905718,+#_49647f3298487cbecee61efc7ef174e2p@chr14:34905716..34905718, +
1.33e-65FFCP PHASE2:Mm9::chr11:4164303..4164316,+#_49647f3298487cbecee61efc7ef174e2p@chr11:4164303..4164316, +
1.33e-65FFCP PHASE1:Mm9::chr14:34905716..34905718,+#_49647f3298487cbecee61efc7ef174e2p@chr14:34905716..34905718, +
1.33e-65FFCP PHASE1:Mm9::chr11:4164303..4164316,+#_49647f3298487cbecee61efc7ef174e2p@chr11:4164303..4164316, +
1.33e-65FFCP PHASE1:Mm9::chr11:100002128..100002131,+#_49647f3298487cbecee61efc7ef174e2p@chr11:100002128..100002131, +
6.04e-65FFCP PHASE2:Mm9::chr1:90456476..90456498,+#_c039cdcbbec73e033cb7df095ee702b1p@chr1:90456476..90456498, +
6.04e-65FFCP PHASE1:Mm9::chr17:25888467..25888513,-#_c039cdcbbec73e033cb7df095ee702b1p@chr17:25888467..25888513, -
6.04e-65FFCP PHASE1:Mm9::chr1:90456476..90456498,+#_c039cdcbbec73e033cb7df095ee702b1p@chr1:90456476..90456498, +
6.04e-65FFCP PHASE2:Mm9::chr15:38385124..38385138,+#_c039cdcbbec73e033cb7df095ee702b1p@chr15:38385124..38385138, +

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