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{{CL
{{CL
|id=CL:0002144
|alt_id=
|name=capillary endothelial cell
|namespace=cell
|def="An endothelial cell found in capillaries." [GOC:tfm]
|xref=BTO:0004956;;FMA:67756
|is_a=CL:0000071
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-08-24T10:15:00Z
|def="An endothelial cell found in capillaries." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002144
|is_a=CL:0000071
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=capillary endothelial cell
|namespace=FANTOM
|obo_creation_date=2010-08-24T10:15:00Z
|part_of=UBERON:0001915
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0004956;;FMA:67756
}}
}}

Latest revision as of 16:40, 12 September 2014

Name:capillary endothelial cell
Namespace:FANTOM
Definition:"An endothelial cell found in capillaries." [GOC:tfm]
Xrefs:
links:

BTO:0004956

FMA:67756
Created by:tmeehan
Creation date:2010-08-24T10:15:00Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000071(blood vessel endothelial cell)
part_of:UBERON:0001915(endothelium of capillary)



Children


derives from:FF:0000050 (human microvascular endothelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 11265-116G5 (Endothelial Cells - Microvascular, donor1)
  • 11342-117G1 (Endothelial Cells - Microvascular, donor2)
  • 11414-118F1 (Endothelial Cells - Microvascular, donor3)

Mouse (Mus musculus)

  • 11265-116G5 (Endothelial Cells - Microvascular, donor1)
  • 11342-117G1 (Endothelial Cells - Microvascular, donor2)
  • 11414-118F1 (Endothelial Cells - Microvascular, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002144 (capillary endothelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.06e-99FFCP PHASE2:Hg19::chr15:65935283..65935297,+#_e30c994849ac02d25f061ef97a04a840p11@SLC24A1
4.06e-99FFCP PHASE1:Hg19::chr15:65935283..65935297,+#_e30c994849ac02d25f061ef97a04a840p11@SLC24A1
6.24e-88FFCP PHASE1:Hg19::chr12:6161828..6161837,-#_9bb0ac06c841282005009b6e1d2377c4p@chr12:6161828..6161837, -
6.24e-88FFCP PHASE2:Hg19::chr12:6161828..6161837,-#_9bb0ac06c841282005009b6e1d2377c4p@chr12:6161828..6161837, -
9.74e-88FFCP PHASE1:Hg19::chr13:102379103..102379108,-#_c761d5bcf3643c5891ae57f5f641d5e7p@chr13:102379103..102379108, -
9.74e-88FFCP PHASE2:Hg19::chr13:102379103..102379108,-#_c761d5bcf3643c5891ae57f5f641d5e7p@chr13:102379103..102379108, -
2.28e-85FFCP PHASE2:Hg19::chr1:214453986..214454002,+#_41730d8aace8709658bc37d31fa019afp10@SMYD2
2.28e-85FFCP PHASE1:Hg19::chr1:214453986..214454002,+#_41730d8aace8709658bc37d31fa019afp10@SMYD2
3.04e-85FFCP PHASE1:Hg19::chr11:108743594..108743616,+#_b1d23d3eea1a1f1ff96573a141de9e1ep@chr11:108743594..108743616, +
3.04e-85FFCP PHASE2:Hg19::chr11:108743594..108743616,+#_b1d23d3eea1a1f1ff96573a141de9e1ep@chr11:108743594..108743616, +
7.21e-85FFCP PHASE2:Hg19::chr1:94526344..94526353,-#_ce422f1860ce59f1630d915a6b748157p4@ABCA4
7.21e-85FFCP PHASE1:Hg19::chr1:94526344..94526353,-#_ce422f1860ce59f1630d915a6b748157p4@ABCA4
1.28e-84FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_3f138d3933987b0b523f1c34e3a98c88p2@ENST00000428006
1.28e-84FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_3f138d3933987b0b523f1c34e3a98c88p2@ENST00000428006
2.27e-84FFCP PHASE2:Hg19::chr18:54339823..54339834,+#_edb87a5693bd5dbc48e2355ed2b764f8p8@WDR7
2.27e-84FFCP PHASE1:Hg19::chr18:54339823..54339834,+#_edb87a5693bd5dbc48e2355ed2b764f8p8@WDR7
3.03e-84FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_28d4cf84910c17bb1c26f89a4fc0cf83p25@CD36
3.03e-84FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_28d4cf84910c17bb1c26f89a4fc0cf83p25@CD36
4.55e-74FFCP PHASE1:Hg19::chr4:38057520..38057536,-#_692d92cc265c9fc67291e713ea4c9e25p@chr4:38057520..38057536, -
4.55e-74FFCP PHASE2:Hg19::chr4:38057520..38057536,-#_692d92cc265c9fc67291e713ea4c9e25p@chr4:38057520..38057536, -
5.01e-67FFCP PHASE1:Hg19::chr20:62679771..62679782,-#_114f8f258a5c610abe72dbe80e8a656ap4@SOX18
5.01e-67FFCP PHASE2:Hg19::chr20:62679771..62679782,-#_114f8f258a5c610abe72dbe80e8a656ap4@SOX18
2.39e-66FFCP PHASE2:Hg19::chr17:54893310..54893315,-#_bb50aeac38c9cdbd7b26917ae2f1917fp15@C17orf67
2.39e-66FFCP PHASE1:Hg19::chr17:54893310..54893315,-#_bb50aeac38c9cdbd7b26917ae2f1917fp15@C17orf67
2.39e-66FFCP PHASE1:Hg19::chr2:122514086..122514090,+#_bb50aeac38c9cdbd7b26917ae2f1917fp5@TSN
2.39e-66FFCP PHASE2:Hg19::chr2:122514086..122514090,+#_bb50aeac38c9cdbd7b26917ae2f1917fp5@TSN
1.33e-60FFCP PHASE2:Hg19::chr3:30560333..30560348,+#_b004936e9def6c02ede2f60a746e546bp@chr3:30560333..30560348, +
1.33e-60FFCP PHASE1:Hg19::chr3:30560333..30560348,+#_b004936e9def6c02ede2f60a746e546bp@chr3:30560333..30560348, +
1.51e-54FFCP PHASE2:Hg19::chr2:56149828..56149839,-#_e97f5a9fd5dd7bdedcfb905e7d822ed3p17@EFEMP1
1.51e-54FFCP PHASE1:Hg19::chr2:56149828..56149839,-#_e97f5a9fd5dd7bdedcfb905e7d822ed3p17@EFEMP1
2.87e-53FFCP PHASE2:Hg19::chr5:106837881..106837888,-#_16e0871ff2dea61c046fc9f1c0a57e64p@chr5:106837881..106837888, -
2.87e-53FFCP PHASE1:Hg19::chr5:106837881..106837888,-#_16e0871ff2dea61c046fc9f1c0a57e64p@chr5:106837881..106837888, -
2.87e-53FFCP PHASE2:Hg19::chr2:73311401..73311431,-#_16e0871ff2dea61c046fc9f1c0a57e64p17@RAB11FIP5
2.87e-53FFCP PHASE1:Hg19::chr2:73311401..73311431,-#_16e0871ff2dea61c046fc9f1c0a57e64p17@RAB11FIP5
3.75e-53FFCP PHASE1:Hg19::chr15:74935416..74935419,-#_684c77cbf3cb5113c4fba82bb2f8c9a5p@chr15:74935416..74935419, -
3.75e-53FFCP PHASE2:Hg19::chr15:74935416..74935419,-#_684c77cbf3cb5113c4fba82bb2f8c9a5p@chr15:74935416..74935419, -
2.64e-50FFCP PHASE1:Hg19::chr12:4690021..4690046,+#_69e65e5977db2fe19c97b82e5484fe4fp@chr12:4690021..4690046, +
2.64e-50FFCP PHASE2:Hg19::chr12:4690021..4690046,+#_69e65e5977db2fe19c97b82e5484fe4fp@chr12:4690021..4690046, +
4.38e-50FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_e22079855ef9a5fdfb741d55ecc43bb6p@chr17:28534912..28534942, -
4.38e-50FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_e22079855ef9a5fdfb741d55ecc43bb6p@chr17:28534912..28534942, -
1.03e-46FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_cdbf7ee65190451c1adc40268bd3fbbap@chr4:189881560..189881604, -
1.03e-46FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_cdbf7ee65190451c1adc40268bd3fbbap@chr4:189881560..189881604, -
1.65e-46FFCP PHASE1:Hg19::chr22:19748407..19748412,+#_64db98413c848af585c3a28c025bd8d0p5@TBX1
1.65e-46FFCP PHASE2:Hg19::chr22:19748407..19748412,+#_64db98413c848af585c3a28c025bd8d0p5@TBX1
5.0e-45FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_202210bcf1e6a424b2ad485080d22926p3@LOC441179
5.0e-45FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_202210bcf1e6a424b2ad485080d22926p3@LOC441179
4.49e-44FFCP PHASE1:Hg19::chr15:65935213..65935234,+#_db2caa704ecf06660412c832aed2aa02p8@SLC24A1
4.49e-44FFCP PHASE2:Hg19::chr15:65935213..65935234,+#_db2caa704ecf06660412c832aed2aa02p8@SLC24A1
1.43e-43FFCP PHASE2:Hg19::chr5:141337703..141337712,-#_a260dd6a9dbc85493af100992549f82cp4@PCDH12
1.43e-43FFCP PHASE1:Hg19::chr5:141337703..141337712,-#_a260dd6a9dbc85493af100992549f82cp4@PCDH12
1.31e-40FFCP PHASE1:Hg19::chr22:19748074..19748094,-#_7ed8c30c0b21d3fa811b93950310eff0p@chr22:19748074..19748094, -
1.31e-40FFCP PHASE2:Hg19::chr22:19748074..19748094,-#_7ed8c30c0b21d3fa811b93950310eff0p@chr22:19748074..19748094, -
1.23e-38FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_8764658044dbaf455a99c9b0feccdda0p17@RASGRP3
1.23e-38FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_8764658044dbaf455a99c9b0feccdda0p17@RASGRP3
2.18e-38FFCP PHASE2:Hg19::chr6:49533964..49533975,+#_615de94118aabe88626bfec284cd6607p@chr6:49533964..49533975, +
2.18e-38FFCP PHASE1:Hg19::chr6:49533964..49533975,+#_615de94118aabe88626bfec284cd6607p@chr6:49533964..49533975, +
3.19e-38FFCP PHASE2:Hg19::chr6:46922535..46922542,-#_03869a173e6c3d7458f9e07c6389a950p9@GPR116
3.19e-38FFCP PHASE1:Hg19::chr6:46922535..46922542,-#_03869a173e6c3d7458f9e07c6389a950p9@GPR116
2.08e-36FFCP PHASE1:Hg19::chr10:3477893..3477912,-#_bb0846b709e6f31e8baad19e2598d150p@chr10:3477893..3477912, -
2.08e-36FFCP PHASE1:Hg19::chr6:84849274..84849294,+#_bb0846b709e6f31e8baad19e2598d150p@chr6:84849274..84849294, +
2.08e-36FFCP PHASE2:Hg19::chr10:3477893..3477912,-#_bb0846b709e6f31e8baad19e2598d150p@chr10:3477893..3477912, -
2.08e-36FFCP PHASE2:Hg19::chr6:84849274..84849294,+#_bb0846b709e6f31e8baad19e2598d150p@chr6:84849274..84849294, +
3.94e-34FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_20a98c576714c5931a9d823f106f12f7p@chr3:30560368..30560379, +
3.94e-34FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_20a98c576714c5931a9d823f106f12f7p@chr3:30560368..30560379, +
5.51e-34FFCP PHASE1:Hg19::chr4:144507245..144507268,-#_a0c45cf4d6160ba54769b9815331571dp@chr4:144507245..144507268, -
5.51e-34FFCP PHASE2:Hg19::chr4:144507245..144507268,-#_a0c45cf4d6160ba54769b9815331571dp@chr4:144507245..144507268, -
5.96e-34FFCP PHASE1:Hg19::chr15:65398647..65398656,-#_96a0985da213c219b0d907731217bdbcp3@UBAP1L
5.96e-34FFCP PHASE1:Hg19::chr10:4823046..4823055,-#_96a0985da213c219b0d907731217bdbcp@chr10:4823046..4823055, -
5.96e-34FFCP PHASE2:Hg19::chr15:65398647..65398656,-#_96a0985da213c219b0d907731217bdbcp3@UBAP1L
5.96e-34FFCP PHASE2:Hg19::chr10:4823046..4823055,-#_96a0985da213c219b0d907731217bdbcp@chr10:4823046..4823055, -
6.51e-34FFCP PHASE2:Hg19::chr1:47183850..47183861,-#_297e6794f7145d6855b353c0c38a382ep12@KIAA0494
6.51e-34FFCP PHASE1:Hg19::chr1:47183850..47183861,-#_297e6794f7145d6855b353c0c38a382ep12@KIAA0494
6.76e-34FFCP PHASE2:Hg19::chr1:228290095..228290116,-#_5aa51ffa1db34a53430a4a5587fe93a3p@chr1:228290095..228290116, -
6.76e-34FFCP PHASE1:Hg19::chr1:228290095..228290116,-#_5aa51ffa1db34a53430a4a5587fe93a3p@chr1:228290095..228290116, -
7.7e-34FFCP PHASE1:Hg19::chr17:65990349..65990362,-#_8937c683a69b3389d76c1901abcf1b8fp@chr17:65990349..65990362, -
7.7e-34FFCP PHASE1:Hg19::chr22:19746577..19746611,+#_8937c683a69b3389d76c1901abcf1b8fp@chr22:19746577..19746611, +
7.7e-34FFCP PHASE2:Hg19::chr19:47231566..47231577,-#_8937c683a69b3389d76c1901abcf1b8fp@chr19:47231566..47231577, -
7.7e-34FFCP PHASE2:Hg19::chr22:19746577..19746611,+#_8937c683a69b3389d76c1901abcf1b8fp@chr22:19746577..19746611, +
7.7e-34FFCP PHASE1:Hg19::chr19:47231566..47231577,-#_8937c683a69b3389d76c1901abcf1b8fp@chr19:47231566..47231577, -
7.7e-34FFCP PHASE2:Hg19::chr17:65990349..65990362,-#_8937c683a69b3389d76c1901abcf1b8fp@chr17:65990349..65990362, -
8.46e-34FFCP PHASE1:Hg19::chr4:183399811..183399829,+#_51c601dcbc3dfd067af1338601c062d2p@chr4:183399811..183399829, +
8.46e-34FFCP PHASE2:Hg19::chr4:183399811..183399829,+#_51c601dcbc3dfd067af1338601c062d2p@chr4:183399811..183399829, +
9.1e-34FFCP PHASE1:Hg19::chr7:107332367..107332379,+#_8537a6ea135f574098b9febb1826b60ep3@SLC26A4
9.1e-34FFCP PHASE2:Hg19::chr7:107332367..107332379,+#_8537a6ea135f574098b9febb1826b60ep3@SLC26A4
2.58e-33FFCP PHASE2:Hg19::chr2:71730376..71730412,+#_c0268cdb49376d31fbf08996e4ef8fe8p@chr2:71730376..71730412, +
2.58e-33FFCP PHASE1:Hg19::chr2:71730376..71730412,+#_c0268cdb49376d31fbf08996e4ef8fe8p@chr2:71730376..71730412, +
6.66e-33FFCP PHASE2:Hg19::chr9:139553916..139553927,+#_45b9995263da4e82251c0bc083e6e979p@chr9:139553916..139553927, +
6.66e-33FFCP PHASE1:Hg19::chr9:139553916..139553927,+#_45b9995263da4e82251c0bc083e6e979p@chr9:139553916..139553927, +
2.17e-32FFCP PHASE1:Hg19::chr10:3466752..3466759,-#_ec89c99f5442b709d54a49ab25439ef1p@chr10:3466752..3466759, -
2.17e-32FFCP PHASE2:Hg19::chr10:3466752..3466759,-#_ec89c99f5442b709d54a49ab25439ef1p@chr10:3466752..3466759, -
2.68e-32FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_194bc3ebae52f8a8b7a2513376dcfbaap@chr12:96841308..96841312, +
2.68e-32FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_194bc3ebae52f8a8b7a2513376dcfbaap@chr12:96841308..96841312, +
2.66e-31FFCP PHASE2:Hg19::chr12:120142354..120142372,-#_2f8db91f55a78f3d3aa8946d15013db4p@chr12:120142354..120142372, -
2.66e-31FFCP PHASE1:Hg19::chr12:120142354..120142372,-#_2f8db91f55a78f3d3aa8946d15013db4p@chr12:120142354..120142372, -
6.66e-31FFCP PHASE2:Hg19::chr1:61415107..61415136,-#_ee8785e7a5e8c62bfd3c43369f1f4dffp@chr1:61415107..61415136, -
6.66e-31FFCP PHASE1:Hg19::chr1:61415107..61415136,-#_ee8785e7a5e8c62bfd3c43369f1f4dffp@chr1:61415107..61415136, -
9.03e-31FFCP PHASE1:Hg19::chr15:89736241..89736275,+#_e65979135e78d50f9f878c3f3f455424p@chr15:89736241..89736275, +
9.03e-31FFCP PHASE2:Hg19::chr15:89736241..89736275,+#_e65979135e78d50f9f878c3f3f455424p@chr15:89736241..89736275, +
4.84e-30FFCP PHASE2:Hg19::chr10:4822908..4822927,-#_bfd397a9543551be1daa54fbfb52cc8bp@chr10:4822908..4822927, -
4.84e-30FFCP PHASE1:Hg19::chr10:4822908..4822927,-#_bfd397a9543551be1daa54fbfb52cc8bp@chr10:4822908..4822927, -

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