Personal tools

CL:0002308: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0002308
|alt_id=
|name=epithelial cell of skin gland
|namespace=cell
|def="An epithelial cell of a skin gland." [GOC:tfm]
|xref=FMA:70657
|is_a=CL:0002159
|synonym="epithelial cell of gland of skin" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-14T12:00:07Z
|def="An epithelial cell of a skin gland." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002308
|is_a=CL:0002159
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=epithelial cell of skin gland
|namespace=FANTOM
|obo_creation_date=2010-09-14T12:00:07Z
|part_of=UBERON:0002419
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="epithelial cell of gland of skin" EXACT []
|union_of=
|xref=FMA:70657
}}
}}

Latest revision as of 16:41, 12 September 2014

Name:epithelial cell of skin gland
Namespace:FANTOM
Definition:"An epithelial cell of a skin gland." [GOC:tfm]
Xrefs:
links:
FMA:70657
Synonyms: "epithelial cell of gland of skin" EXACT []
Created by:tmeehan
Creation date:2010-09-14T12:00:07Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002159(general ecto-epithelial cell)
part_of:UBERON:0002419(skin gland)



Children


is a:CL:1000448 (epithelial cell of sweat gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002308 (epithelial cell of skin gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr1:153321274..153321283,-#_1d8460235a69413beae5651cc4ea6da1p2@PGLYRP4
1.55e-98FFCP PHASE2:Hg19::chr1:153321274..153321283,-#_1d8460235a69413beae5651cc4ea6da1p2@PGLYRP4
2.56e-98FFCP PHASE2:Hg19::chrY:7671916..7671924,-#_9bdb8167e74a756ff7f9b302ea3ff803p@chrY:7671916..7671924, -
2.56e-98FFCP PHASE1:Hg19::chrY:7671916..7671924,-#_9bdb8167e74a756ff7f9b302ea3ff803p@chrY:7671916..7671924, -
3.49e-79FFCP PHASE1:Hg19::chr17:19702846..19702866,-#_47f2fdc1d46ee8162634a5d6eac55b9dp@chr17:19702846..19702866, -
3.49e-79FFCP PHASE2:Hg19::chr17:19702846..19702866,-#_47f2fdc1d46ee8162634a5d6eac55b9dp@chr17:19702846..19702866, -
5.22e-79FFCP PHASE2:Hg19::chr1:207038965..207038969,+#_30952dc4752690bf0991220bc2499e50p1@IL20
5.22e-79FFCP PHASE1:Hg19::chr1:207038965..207038969,+#_30952dc4752690bf0991220bc2499e50p1@IL20
5.53e-66FFCP PHASE1:Hg19::chr6:12577789..12577820,-#_6215c5de71904312e1ab1098d7f984b4p@chr6:12577789..12577820, -
5.53e-66FFCP PHASE2:Hg19::chr6:12577789..12577820,-#_6215c5de71904312e1ab1098d7f984b4p@chr6:12577789..12577820, -
4.77e-57FFCP PHASE1:Hg19::chr10:118187325..118187332,+#_47c5ad3f5d461a35c8d1c52a70b88de1p5@PNLIPRP3
4.77e-57FFCP PHASE2:Hg19::chr10:118187325..118187332,+#_47c5ad3f5d461a35c8d1c52a70b88de1p5@PNLIPRP3
1.13e-56FFCP PHASE2:Hg19::chr9:27524485..27524505,+#_5e6011eeda3c756a8aa46f8ed07dff65p2@IFNK
1.13e-56FFCP PHASE1:Hg19::chr9:27524485..27524505,+#_5e6011eeda3c756a8aa46f8ed07dff65p2@IFNK
4.0e-50FFCP PHASE2:Hg19::chr8:22844791..22844808,+#_e9618007920c6ae01903308d3e99206ep16@RHOBTB2
4.0e-50FFCP PHASE1:Hg19::chr8:22844791..22844808,+#_e9618007920c6ae01903308d3e99206ep16@RHOBTB2
4.52e-50FFCP PHASE2:Hg19::chr15:42566576..42566581,+#_612e8bc9f687b42ac60f891fbd0323b7p18@GANC
4.52e-50FFCP PHASE1:Hg19::chr15:42566576..42566581,+#_612e8bc9f687b42ac60f891fbd0323b7p18@GANC
4.52e-50FFCP PHASE2:Hg19::chr5:150951045..150951053,-#_612e8bc9f687b42ac60f891fbd0323b7p@chr5:150951045..150951053, -
4.52e-50FFCP PHASE1:Hg19::chr5:150951045..150951053,-#_612e8bc9f687b42ac60f891fbd0323b7p@chr5:150951045..150951053, -
4.52e-50FFCP PHASE2:Hg19::chr12:122430653..122430662,+#_612e8bc9f687b42ac60f891fbd0323b7p@chr12:122430653..122430662, +
4.52e-50FFCP PHASE1:Hg19::chr12:122430653..122430662,+#_612e8bc9f687b42ac60f891fbd0323b7p@chr12:122430653..122430662, +
5.15e-50FFCP PHASE1:Hg19::chr2:238933920..238933935,+#_55b1c32413aed0f72cb8633f965f8af0p7@UBE2F
5.15e-50FFCP PHASE2:Hg19::chr2:238933920..238933935,+#_55b1c32413aed0f72cb8633f965f8af0p7@UBE2F
1.09e-49FFCP PHASE1:Hg19::chr7:121156367..121156370,-#_0bdc730b09aa5c83c77e06f35642dc58p@chr7:121156367..121156370, -
1.09e-49FFCP PHASE2:Hg19::chr7:121156367..121156370,-#_0bdc730b09aa5c83c77e06f35642dc58p@chr7:121156367..121156370, -
3.19e-45FFCP PHASE1:Hg19::chr18:9538358..9538360,+#_5b3bec77f66f7a93a6f85e8a11e8cfa2p@chr18:9538358..9538360, +
3.19e-45FFCP PHASE2:Hg19::chr18:9538358..9538360,+#_5b3bec77f66f7a93a6f85e8a11e8cfa2p@chr18:9538358..9538360, +
9.79e-45FFCP PHASE2:Hg19::chr9:117972180..117972191,+#_0e8b461da9fdc0955246a60f7e039e34p@chr9:117972180..117972191, +
9.79e-45FFCP PHASE1:Hg19::chr9:117972180..117972191,+#_0e8b461da9fdc0955246a60f7e039e34p@chr9:117972180..117972191, +
1.91e-44FFCP PHASE2:Hg19::chr10:47740297..47740299,+#_bd42cc70216c31d1432f7458d58f5799p1@FAM25HP
1.91e-44FFCP PHASE1:Hg19::chr10:47740297..47740299,+#_bd42cc70216c31d1432f7458d58f5799p1@FAM25HP
1.34e-40FFCP PHASE2:Hg19::chr7:97984729..97984742,-#_2443c3e12293f5b29990b360c5f6c380p14@BAIAP2L1
1.34e-40FFCP PHASE1:Hg19::chr7:97984729..97984742,-#_2443c3e12293f5b29990b360c5f6c380p14@BAIAP2L1
1.34e-40FFCP PHASE2:Hg19::chr3:189654013..189654016,-#_2443c3e12293f5b29990b360c5f6c380p@chr3:189654013..189654016, -
1.34e-40FFCP PHASE1:Hg19::chr3:189654013..189654016,-#_2443c3e12293f5b29990b360c5f6c380p@chr3:189654013..189654016, -
2.01e-40FFCP PHASE1:Hg19::chr17:38652332..38652344,-#_f6b0b692e2051cc9790bf36a2eb2d58ep18@TNS4
2.01e-40FFCP PHASE2:Hg19::chr2:131669803..131669810,+#_f6b0b692e2051cc9790bf36a2eb2d58ep@chr2:131669803..131669810, +
2.01e-40FFCP PHASE2:Hg19::chr17:38652332..38652344,-#_f6b0b692e2051cc9790bf36a2eb2d58ep18@TNS4
2.01e-40FFCP PHASE1:Hg19::chr2:131669803..131669810,+#_f6b0b692e2051cc9790bf36a2eb2d58ep@chr2:131669803..131669810, +
2.46e-40FFCP PHASE2:Hg19::chr9:27524537..27524559,+#_591c718c9b1437528623de534f9e1313p1@IFNK
2.46e-40FFCP PHASE1:Hg19::chr9:27524537..27524559,+#_591c718c9b1437528623de534f9e1313p1@IFNK
5.49e-40FFCP PHASE1:Hg19::chr5:134906500..134906526,+#_75955f9c8837b732d759bbd2a34579fap@chr5:134906500..134906526, +
5.49e-40FFCP PHASE2:Hg19::chr5:134906500..134906526,+#_75955f9c8837b732d759bbd2a34579fap@chr5:134906500..134906526, +
1.89e-37FFCP PHASE2:Hg19::chr5:167247103..167247112,+#_293ff844f9dac89687be919fb7252713p@chr5:167247103..167247112, +
1.89e-37FFCP PHASE1:Hg19::chr5:167247103..167247112,+#_293ff844f9dac89687be919fb7252713p@chr5:167247103..167247112, +
4.73e-37FFCP PHASE2:Hg19::chr5:52619638..52619641,+#_a90554c6e12486eededbce320980052bp@chr5:52619638..52619641, +
4.73e-37FFCP PHASE1:Hg19::chr5:52619638..52619641,+#_a90554c6e12486eededbce320980052bp@chr5:52619638..52619641, +
1.18e-36FFCP PHASE2:Hg19::chr19:44306567..44306574,-#_474f64b349430cb1364f622d87a5f9a3p7@LYPD5
1.18e-36FFCP PHASE1:Hg19::chr19:44306567..44306574,-#_474f64b349430cb1364f622d87a5f9a3p7@LYPD5
1.42e-36FFCP PHASE2:Hg19::chr14:51955760..51955769,+#_018eca28beeb713c10028a0bf99fb8eep29@FRMD6
1.42e-36FFCP PHASE1:Hg19::chr14:51955760..51955769,+#_018eca28beeb713c10028a0bf99fb8eep29@FRMD6
1.7e-36FFCP PHASE2:Hg19::chr2:213770576..213770587,+#_3a992a349307a38b980b22ecae93f29ep@chr2:213770576..213770587, +
1.7e-36FFCP PHASE1:Hg19::chr2:213770576..213770587,+#_3a992a349307a38b980b22ecae93f29ep@chr2:213770576..213770587, +
2.04e-36FFCP PHASE2:Hg19::chr13:30259768..30259777,+#_3757ea7c51a924d049cf60924c50c4cap@chr13:30259768..30259777, +
2.04e-36FFCP PHASE1:Hg19::chr13:30259768..30259777,+#_3757ea7c51a924d049cf60924c50c4cap@chr13:30259768..30259777, +
2.45e-36FFCP PHASE2:Hg19::chr2:62257232..62257274,+#_543337aed4c8db3c289d0feb150a3989p@chr2:62257232..62257274, +
2.45e-36FFCP PHASE1:Hg19::chr2:62257232..62257274,+#_543337aed4c8db3c289d0feb150a3989p@chr2:62257232..62257274, +
3.61e-34FFCP PHASE2:Hg19::chr5:93905715..93905716,+#_c522c45529ddb56257c1291fc20c5cd6p2@uc003kkq.1
3.61e-34FFCP PHASE1:Hg19::chr5:93905715..93905716,+#_c522c45529ddb56257c1291fc20c5cd6p2@uc003kkq.1
5.04e-34FFCP PHASE2:Hg19::chr16:57954541..57954548,-#_8e08132ccafd7488c7e90068dd5bd3bcp@chr16:57954541..57954548, -
5.04e-34FFCP PHASE2:Hg19::chr5:64400723..64400730,-#_8e08132ccafd7488c7e90068dd5bd3bcp@chr5:64400723..64400730, -
5.04e-34FFCP PHASE1:Hg19::chr16:57954541..57954548,-#_8e08132ccafd7488c7e90068dd5bd3bcp@chr16:57954541..57954548, -
5.04e-34FFCP PHASE1:Hg19::chr5:64400723..64400730,-#_8e08132ccafd7488c7e90068dd5bd3bcp@chr5:64400723..64400730, -
7.05e-34FFCP PHASE2:Hg19::chr4:44963669..44963674,+#_67e61a3adc6d7ed5c38272d114effd43p@chr4:44963669..44963674, +
7.05e-34FFCP PHASE1:Hg19::chr4:87770064..87770069,-#_67e61a3adc6d7ed5c38272d114effd43p13@SLC10A6
7.05e-34FFCP PHASE1:Hg19::chr4:44963669..44963674,+#_67e61a3adc6d7ed5c38272d114effd43p@chr4:44963669..44963674, +
7.05e-34FFCP PHASE2:Hg19::chr7:17719182..17719193,-#_67e61a3adc6d7ed5c38272d114effd43p@chr7:17719182..17719193, -
7.05e-34FFCP PHASE2:Hg19::chr19:1611369..1611372,-#_67e61a3adc6d7ed5c38272d114effd43p13@TCF3
7.05e-34FFCP PHASE1:Hg19::chr19:1611369..1611372,-#_67e61a3adc6d7ed5c38272d114effd43p13@TCF3
7.05e-34FFCP PHASE1:Hg19::chr7:17719182..17719193,-#_67e61a3adc6d7ed5c38272d114effd43p@chr7:17719182..17719193, -
7.05e-34FFCP PHASE2:Hg19::chr4:87770064..87770069,-#_67e61a3adc6d7ed5c38272d114effd43p13@SLC10A6
1.17e-33FFCP PHASE2:Hg19::chr12:28125953..28125964,-#_a45dd17a757f7f7e21308c804cc33bcfp17@PTHLH
1.17e-33FFCP PHASE1:Hg19::chr12:28125953..28125964,-#_a45dd17a757f7f7e21308c804cc33bcfp17@PTHLH
1.39e-33FFCP PHASE1:Hg19::chr16:69145093..69145094,+#_d6e2bb0859f2aae6e267402657065122p@chr16:69145093..69145094, +
1.39e-33FFCP PHASE2:Hg19::chr16:69145093..69145094,+#_d6e2bb0859f2aae6e267402657065122p@chr16:69145093..69145094, +
2.29e-33FFCP PHASE2:Hg19::chr11:128812910..128812927,-#_710e5441f4fe5dbb3afd40d60ecaf301p2@TP53AIP1
2.29e-33FFCP PHASE1:Hg19::chr11:128812910..128812927,-#_710e5441f4fe5dbb3afd40d60ecaf301p2@TP53AIP1
7.33e-32FFCP PHASE1:Hg19::chr17:38120375..38120394,+#_8bbcf878a6b982a012454cd18df2e527p@chr17:38120375..38120394, +
7.33e-32FFCP PHASE2:Hg19::chr17:38120375..38120394,+#_8bbcf878a6b982a012454cd18df2e527p@chr17:38120375..38120394, +
1.87e-31FFCP PHASE2:Hg19::chr17:60782123..60782133,+#_3ef83acc5e8dcfe31f79b18dcdc953e4p@chr17:60782123..60782133, +
1.87e-31FFCP PHASE1:Hg19::chr17:60782123..60782133,+#_3ef83acc5e8dcfe31f79b18dcdc953e4p@chr17:60782123..60782133, +
4.04e-31FFCP PHASE2:Hg19::chr11:72295793..72295812,-#_762968a7e2812662ae688aac348e985ep9@PDE2A
4.04e-31FFCP PHASE1:Hg19::chr11:72295793..72295812,-#_762968a7e2812662ae688aac348e985ep9@PDE2A
2.22e-29FFCP PHASE2:Hg19::chr21:44957855..44957891,-#_1f12be7225d3a9022f9d7123ff9bdd68p@chr21:44957855..44957891, -
2.22e-29FFCP PHASE1:Hg19::chr21:44957855..44957891,-#_1f12be7225d3a9022f9d7123ff9bdd68p@chr21:44957855..44957891, -
2.56e-29FFCP PHASE1:Hg19::chr17:80037380..80037391,-#_6a8ec6e2f8691e3894a8a87713ed615fp6@BC065179
2.56e-29FFCP PHASE2:Hg19::chr17:80037380..80037391,-#_6a8ec6e2f8691e3894a8a87713ed615fp6@BC065179
3.41e-29FFCP PHASE2:Hg19::chr5:167247213..167247223,+#_7cfe923a05819fd2bad37d599e75a8e7p@chr5:167247213..167247223, +
3.41e-29FFCP PHASE1:Hg19::chr5:167247213..167247223,+#_7cfe923a05819fd2bad37d599e75a8e7p@chr5:167247213..167247223, +
6.06e-29FFCP PHASE2:Hg19::chr11:93754316..93754353,+#_0c6e2bd435dd9e056e627b914cfa6c00p2@HEPHL1
6.06e-29FFCP PHASE1:Hg19::chr11:93754316..93754353,+#_0c6e2bd435dd9e056e627b914cfa6c00p2@HEPHL1
8.13e-28FFCP PHASE2:Hg19::chr7:40883521..40883532,+#_cb0dec7323598cc8cbb78889079f0ac1p@chr7:40883521..40883532, +
8.13e-28FFCP PHASE1:Hg19::chr7:40883521..40883532,+#_cb0dec7323598cc8cbb78889079f0ac1p@chr7:40883521..40883532, +
1.22e-27FFCP PHASE2:Hg19::chr5:111445067..111445085,-#_f916b297f78ed1830990ffd7bd5c2f38p@chr5:111445067..111445085, -
1.22e-27FFCP PHASE1:Hg19::chr5:111445067..111445085,-#_f916b297f78ed1830990ffd7bd5c2f38p@chr5:111445067..111445085, -
1.6e-27FFCP PHASE1:Hg19::chr7:157086249..157086269,-#_c6ae55596248bc6cdb79bcc958c9b828p@chr7:157086249..157086269, -
1.6e-27FFCP PHASE2:Hg19::chr1:209601525..209601530,+#_c6ae55596248bc6cdb79bcc958c9b828p@chr1:209601525..209601530, +
1.6e-27FFCP PHASE1:Hg19::chr1:209601525..209601530,+#_c6ae55596248bc6cdb79bcc958c9b828p@chr1:209601525..209601530, +
1.6e-27FFCP PHASE2:Hg19::chr7:157086249..157086269,-#_c6ae55596248bc6cdb79bcc958c9b828p@chr7:157086249..157086269, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002308&oldid=3275445"