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{{CL
{{CL
|id=CL:0002491
|alt_id=
|name=auditory epithelial cell
|namespace=cell
|def="A specialized cell involved in auditory sensory perception." [GOC:tfm]
|xref=
|is_a=CL:0000098
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-12-06T03:18:43Z
|def="A specialized cell involved in auditory sensory perception." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002491
|is_a=CL:0000098
|is_obsolete=
|located_in=
|located_in=
|name=auditory epithelial cell
|namespace=FANTOM
|obo_creation_date=2010-12-06T03:18:43Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:43, 12 September 2014

Name:auditory epithelial cell
Namespace:FANTOM
Definition:"A specialized cell involved in auditory sensory perception." [GOC:tfm]
Created by:tmeehan
Creation date:2010-12-06T03:18:43Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000098(sensory epithelial cell)



Children


is a:CL:0000202 (auditory hair cell),CL:0005014 (auditory epithelial support cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002491 (auditory epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_d8421a0cfd1b4c1125356250a3301f5bp5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_d8421a0cfd1b4c1125356250a3301f5bp4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_d8421a0cfd1b4c1125356250a3301f5bp3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_d8421a0cfd1b4c1125356250a3301f5bp2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:42206730..42206739, -
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_d8421a0cfd1b4c1125356250a3301f5bp2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_d8421a0cfd1b4c1125356250a3301f5bp2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Dytn
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_d8421a0cfd1b4c1125356250a3301f5bp@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_d8421a0cfd1b4c1125356250a3301f5bp2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_d8421a0cfd1b4c1125356250a3301f5bp7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_d8421a0cfd1b4c1125356250a3301f5bp4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_d8421a0cfd1b4c1125356250a3301f5bp@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_d8421a0cfd1b4c1125356250a3301f5bp7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_d8421a0cfd1b4c1125356250a3301f5bp5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_d8421a0cfd1b4c1125356250a3301f5bp4@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Strc
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_d8421a0cfd1b4c1125356250a3301f5bp2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_d8421a0cfd1b4c1125356250a3301f5bp4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_d8421a0cfd1b4c1125356250a3301f5bp10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_d8421a0cfd1b4c1125356250a3301f5bp4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_d8421a0cfd1b4c1125356250a3301f5bp4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_d8421a0cfd1b4c1125356250a3301f5bp21@Espn
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_d8421a0cfd1b4c1125356250a3301f5bp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_d8421a0cfd1b4c1125356250a3301f5bp5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_d8421a0cfd1b4c1125356250a3301f5bp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:103146966..103146971, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_d8421a0cfd1b4c1125356250a3301f5bp4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_d8421a0cfd1b4c1125356250a3301f5bp5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:42206745..42206774, -

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