Personal tools

CL:0005020: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0005020
|alt_id=
|name=lymphangioblast
|namespace=cell
|def="Lymphatic progenitor cells. Usually express Prox1, or prox1b." [CL:CVS]
|xref=
|is_a=CL:0000048
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=Ceri
|created_by=Ceri
|obo_creation_date=2012-01-12T04:44:34Z
|def="Lymphatic progenitor cells. Usually express Prox1, or prox1b." [CL:CVS]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0005020
|is_a=CL:0000048
|is_obsolete=
|located_in=
|located_in=
|name=lymphangioblast
|namespace=FANTOM
|obo_creation_date=2012-01-12T04:44:34Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:46, 12 September 2014

Name:lymphangioblast
Namespace:FANTOM
Definition:"Lymphatic progenitor cells. Usually express Prox1, or prox1b." [CL:CVS]
Created by:Ceri
Creation date:2012-01-12T04:44:34Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000048(multi fate stem cell)



Children


is a:CL:0005022 (vascular lymphangioblast)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0005020 (lymphangioblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.07e-135FFCP PHASE2:Hg19::chr9:13432964..13432971,-#_c41440aff3af885a64bba011360079a5p@chr9:13432964..13432971, -
1.07e-135FFCP PHASE1:Hg19::chr9:13432964..13432971,-#_c41440aff3af885a64bba011360079a5p@chr9:13432964..13432971, -
5.17e-105FFCP PHASE1:Hg19::chr1:65344872..65344880,-#_cd0e6d5138655229cf95cbb99aca357bp15@JAK1
5.17e-105FFCP PHASE2:Hg19::chr1:65344872..65344880,-#_cd0e6d5138655229cf95cbb99aca357bp15@JAK1
5.07e-102FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_c666ed8724991bbbd80129b9577c005cp@chr3:30560368..30560379, +
5.07e-102FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_c666ed8724991bbbd80129b9577c005cp@chr3:30560368..30560379, +
1.86e-98FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_77c7fba632e29f35984483346275644dp@chr17:28534912..28534942, -
1.86e-98FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_77c7fba632e29f35984483346275644dp@chr17:28534912..28534942, -
3.73e-91FFCP PHASE2:Hg19::chr2:56149881..56149899,-#_dac4d29d9ce6f0621af506ae7e65c8a8p14@EFEMP1
3.73e-91FFCP PHASE1:Hg19::chr2:56149881..56149899,-#_dac4d29d9ce6f0621af506ae7e65c8a8p14@EFEMP1
3.34e-87FFCP PHASE1:Hg19::chr19:48613876..48613886,-#_e97850afc81ede56476dc63235b5a768p7@PLA2G4C
3.34e-87FFCP PHASE2:Hg19::chr19:48613876..48613886,-#_e97850afc81ede56476dc63235b5a768p7@PLA2G4C
1.6e-85FFCP PHASE2:Hg19::chr6:74848034..74848043,+#_71405f8906bdfcd0a401915369766850p@chr6:74848034..74848043, +
1.6e-85FFCP PHASE1:Hg19::chr6:74848034..74848043,+#_71405f8906bdfcd0a401915369766850p@chr6:74848034..74848043, +
1.48e-75FFCP PHASE2:Hg19::chr6:5054373..5054392,-#_77619fc58343698d658f0f00ac67b1a1p1@AK126470
1.48e-75FFCP PHASE1:Hg19::chr6:5054373..5054392,-#_77619fc58343698d658f0f00ac67b1a1p1@AK126470
2.17e-75FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_8651ebad149f506d7848d7f83dd2af29p25@CD36
2.17e-75FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_8651ebad149f506d7848d7f83dd2af29p25@CD36
2.63e-75FFCP PHASE1:Hg19::chr3:145968441..145968451,-#_b6b3a0c1fc85502410554a0c9251b8ccp17@PLSCR4
2.63e-75FFCP PHASE2:Hg19::chr3:145968441..145968451,-#_b6b3a0c1fc85502410554a0c9251b8ccp17@PLSCR4
3.19e-75FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_c29d75c61d73198d54e907e71b16adf6p17@RASGRP3
3.19e-75FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_c29d75c61d73198d54e907e71b16adf6p17@RASGRP3
3.86e-75FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_66134a524937d764bd8835a3cb6f4509p2@ENST00000428006
3.86e-75FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_66134a524937d764bd8835a3cb6f4509p2@ENST00000428006
2.58e-74FFCP PHASE1:Hg19::chr12:46807404..46807413,+#_f2b37b25f9ed5a300dc102c88a62b649p@chr12:46807404..46807413, +
2.58e-74FFCP PHASE1:Hg19::chr17:28534879..28534889,-#_f2b37b25f9ed5a300dc102c88a62b649p@chr17:28534879..28534889, -
2.58e-74FFCP PHASE2:Hg19::chr12:46807404..46807413,+#_f2b37b25f9ed5a300dc102c88a62b649p@chr12:46807404..46807413, +
2.58e-74FFCP PHASE2:Hg19::chr17:28534879..28534889,-#_f2b37b25f9ed5a300dc102c88a62b649p@chr17:28534879..28534889, -
4.26e-74FFCP PHASE2:Hg19::chr7:79998905..79998917,+#_4f9934bf2d87c072aa0ce42d26bd3450p26@CD36
4.26e-74FFCP PHASE1:Hg19::chr7:79998905..79998917,+#_4f9934bf2d87c072aa0ce42d26bd3450p26@CD36
1.77e-72FFCP PHASE1:Hg19::chr8:30300216..30300245,+#_150515ca53a1a8bb72f2ed8db0ca69a4p10@RBPMS
1.77e-72FFCP PHASE2:Hg19::chr8:30300216..30300245,+#_150515ca53a1a8bb72f2ed8db0ca69a4p10@RBPMS
2.83e-66FFCP PHASE1:Hg19::chr11:108794408..108794422,+#_5dc1f921fad66628023c0b2ab4dced2ep@chr11:108794408..108794422, +
2.83e-66FFCP PHASE1:Hg19::chr2:33661526..33661535,+#_5dc1f921fad66628023c0b2ab4dced2ep23@RASGRP3
2.83e-66FFCP PHASE1:Hg19::chr1:66723029..66723041,+#_5dc1f921fad66628023c0b2ab4dced2ep54@PDE4B
2.83e-66FFCP PHASE1:Hg19::chr11:108794429..108794441,+#_5dc1f921fad66628023c0b2ab4dced2ep@chr11:108794429..108794441, +
2.83e-66FFCP PHASE2:Hg19::chr11:108794408..108794422,+#_5dc1f921fad66628023c0b2ab4dced2ep@chr11:108794408..108794422, +
2.83e-66FFCP PHASE2:Hg19::chr17:75873825..75873826,+#_5dc1f921fad66628023c0b2ab4dced2ep@chr17:75873825..75873826, +
2.83e-66FFCP PHASE2:Hg19::chr11:108794429..108794441,+#_5dc1f921fad66628023c0b2ab4dced2ep@chr11:108794429..108794441, +
2.83e-66FFCP PHASE2:Hg19::chr4:114238344..114238353,+#_5dc1f921fad66628023c0b2ab4dced2ep58@ANK2
2.83e-66FFCP PHASE1:Hg19::chr17:75873825..75873826,+#_5dc1f921fad66628023c0b2ab4dced2ep@chr17:75873825..75873826, +
2.83e-66FFCP PHASE2:Hg19::chr2:33661526..33661535,+#_5dc1f921fad66628023c0b2ab4dced2ep23@RASGRP3
2.83e-66FFCP PHASE1:Hg19::chr4:114238344..114238353,+#_5dc1f921fad66628023c0b2ab4dced2ep58@ANK2
2.83e-66FFCP PHASE2:Hg19::chr1:66723029..66723041,+#_5dc1f921fad66628023c0b2ab4dced2ep54@PDE4B
1.5e-63FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_5ad0677a35040f68fe04b6f6bebf5ee3p@chr4:189881560..189881604, -
1.5e-63FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_5ad0677a35040f68fe04b6f6bebf5ee3p@chr4:189881560..189881604, -
2.87e-63FFCP PHASE1:Hg19::chr4:90857427..90857438,+#_f14b19d72c7192177dcfd654b1b31460p@chr4:90857427..90857438, +
2.87e-63FFCP PHASE2:Hg19::chr4:90857427..90857438,+#_f14b19d72c7192177dcfd654b1b31460p@chr4:90857427..90857438, +
3.26e-63FFCP PHASE1:Hg19::chr10:4823152..4823165,-#_8210644cbf614765e25aeb2dc59c0831p@chr10:4823152..4823165, -
3.26e-63FFCP PHASE2:Hg19::chr10:4823152..4823165,-#_8210644cbf614765e25aeb2dc59c0831p@chr10:4823152..4823165, -
7.06e-63FFCP PHASE2:Hg19::chr6:49534004..49534016,+#_5c9e03c6d7657551d8ed6e545fa96d0cp@chr6:49534004..49534016, +
7.06e-63FFCP PHASE1:Hg19::chr6:49534004..49534016,+#_5c9e03c6d7657551d8ed6e545fa96d0cp@chr6:49534004..49534016, +
1.53e-62FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_0102042ea2407f16f5cdb3a943983b81p@chr12:96841308..96841312, +
1.53e-62FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_0102042ea2407f16f5cdb3a943983b81p@chr12:96841308..96841312, +
8.15e-60FFCP PHASE2:Hg19::chr1:43917566..43917577,-#_dadff3b328475fa74efa4b2cbdee3b6ep6@HYI
8.15e-60FFCP PHASE1:Hg19::chr1:43917566..43917577,-#_dadff3b328475fa74efa4b2cbdee3b6ep6@HYI
9.96e-60FFCP PHASE2:Hg19::chr3:34262215..34262222,+#_217ca1ff4aa8166e3ac5648beef45730p@chr3:34262215..34262222, +
9.96e-60FFCP PHASE1:Hg19::chr3:34262215..34262222,+#_217ca1ff4aa8166e3ac5648beef45730p@chr3:34262215..34262222, +
1.22e-59FFCP PHASE1:Hg19::chr18:54339814..54339822,+#_f4e7c82adfdd74da08a47f8a878f0392p7@WDR7
1.22e-59FFCP PHASE2:Hg19::chr18:54339814..54339822,+#_f4e7c82adfdd74da08a47f8a878f0392p7@WDR7
1.82e-59FFCP PHASE2:Hg19::chr7:10196589..10196595,-#_0c18737eba9a0be7b30a85e466d19574p@chr7:10196589..10196595, -
1.82e-59FFCP PHASE1:Hg19::chr7:10196589..10196595,-#_0c18737eba9a0be7b30a85e466d19574p@chr7:10196589..10196595, -
2.22e-59FFCP PHASE1:Hg19::chr2:62705562..62705579,+#_deb1e6231f7f343a4c7a8697664ab413p@chr2:62705562..62705579, +
2.22e-59FFCP PHASE2:Hg19::chr2:62705562..62705579,+#_deb1e6231f7f343a4c7a8697664ab413p@chr2:62705562..62705579, +
8.76e-59FFCP PHASE2:Hg19::chr4:90856951..90856962,+#_0f14f07ed72eb58fa25f35783c0258dfp@chr4:90856951..90856962, +
8.76e-59FFCP PHASE1:Hg19::chr4:90856951..90856962,+#_0f14f07ed72eb58fa25f35783c0258dfp@chr4:90856951..90856962, +
8.76e-59FFCP PHASE1:Hg19::chr12:71031281..71031292,-#_0f14f07ed72eb58fa25f35783c0258dfp12@PTPRB
8.76e-59FFCP PHASE2:Hg19::chr12:71031281..71031292,-#_0f14f07ed72eb58fa25f35783c0258dfp12@PTPRB
2.07e-53FFCP PHASE1:Hg19::chr12:105882068..105882076,+#_943a36607fe5e093813345d795cb5109p@chr12:105882068..105882076, +
2.07e-53FFCP PHASE2:Hg19::chr12:105882068..105882076,+#_943a36607fe5e093813345d795cb5109p@chr12:105882068..105882076, +
2.7e-53FFCP PHASE2:Hg19::chr8:6459787..6459796,+#_1813ddb1db3f3ed0dd428dd11e4200e0p@chr8:6459787..6459796, +
2.7e-53FFCP PHASE1:Hg19::chr8:6459787..6459796,+#_1813ddb1db3f3ed0dd428dd11e4200e0p@chr8:6459787..6459796, +
8.47e-53FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_79fd75af9d8c6bfb76f8215c0d213a08p@chr4:38057595..38057624, -
8.47e-53FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_79fd75af9d8c6bfb76f8215c0d213a08p@chr4:38057595..38057624, -
5.43e-52FFCP PHASE2:Hg19::chr3:194868639..194868654,+#_0f271e2fd169ab8df317e6aedb69f0afp1@ENST00000426468
5.43e-52FFCP PHASE1:Hg19::chr3:194868639..194868654,+#_0f271e2fd169ab8df317e6aedb69f0afp1@ENST00000426468
5.37e-50FFCP PHASE2:Hg19::chr8:16425014..16425019,-#_cc8d1bce8ea710f8da847658bde1fd44p13@MSR1
5.37e-50FFCP PHASE1:Hg19::chr8:16425014..16425019,-#_cc8d1bce8ea710f8da847658bde1fd44p13@MSR1
1.05e-49FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_a72c9db85a614bf21bd0b536ac8c90f4p3@LOC441179
1.05e-49FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_a72c9db85a614bf21bd0b536ac8c90f4p3@LOC441179
1.46e-49FFCP PHASE2:Hg19::chr2:27487913..27487933,-#_a0db846f349a20e2c7f8821ffeecea6cp@chr2:27487913..27487933, -
1.46e-49FFCP PHASE1:Hg19::chr2:27487913..27487933,-#_a0db846f349a20e2c7f8821ffeecea6cp@chr2:27487913..27487933, -
2.21e-49FFCP PHASE1:Hg19::chr8:6420777..6420779,-#_8e23d052d1503086ce9ffc31fb1995f8p5@ANGPT2
2.21e-49FFCP PHASE2:Hg19::chr8:6420777..6420779,-#_8e23d052d1503086ce9ffc31fb1995f8p5@ANGPT2
9.56e-49FFCP PHASE1:Hg19::chr10:94590895..94590905,+#_0aebd85bb7d97920418defe562554296p8@EXOC6
9.56e-49FFCP PHASE2:Hg19::chr10:94590895..94590905,+#_0aebd85bb7d97920418defe562554296p8@EXOC6
4.56e-48FFCP PHASE2:Hg19::chr8:16425043..16425061,-#_0469f94c30bf3a592a3a629af3dd3652p5@MSR1
4.56e-48FFCP PHASE1:Hg19::chr8:16425043..16425061,-#_0469f94c30bf3a592a3a629af3dd3652p5@MSR1
4.82e-46FFCP PHASE1:Hg19::chr17:79426425..79426444,+#_21dcc059fa75d8bf3912157ad88beeebp@chr17:79426425..79426444, +
4.82e-46FFCP PHASE2:Hg19::chr17:79426425..79426444,+#_21dcc059fa75d8bf3912157ad88beeebp@chr17:79426425..79426444, +
9.71e-46FFCP PHASE1:Hg19::chr11:57543275..57543296,+#_1837e22a44187af6b090d11c6e852b2ap@chr11:57543275..57543296, +
9.71e-46FFCP PHASE2:Hg19::chr11:57543275..57543296,+#_1837e22a44187af6b090d11c6e852b2ap@chr11:57543275..57543296, +
1.36e-44FFCP PHASE2:Hg19::chr19:45226133..45226157,-#_412e4d90309240d7730c47b17885ddd0p@chr19:45226133..45226157, -
1.36e-44FFCP PHASE1:Hg19::chr19:45226133..45226157,-#_412e4d90309240d7730c47b17885ddd0p@chr19:45226133..45226157, -
3.19e-44FFCP PHASE2:Hg19::chr3:159570877..159570888,+#_4ab1a79d3babd7944f859609e69ca74cp43@SCHIP1
3.19e-44FFCP PHASE1:Hg19::chr3:159570877..159570888,+#_4ab1a79d3babd7944f859609e69ca74cp43@SCHIP1
6.49e-44FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_d55cd362b16f967146dea994bceda0b2p10@PTPRB
6.49e-44FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_d55cd362b16f967146dea994bceda0b2p10@PTPRB
8.09e-44FFCP PHASE2:Hg19::chr7:79998864..79998896,+#_f020a34ed5d89d8db22bce6b84ff1477p12@CD36
8.09e-44FFCP PHASE1:Hg19::chr7:79998864..79998896,+#_f020a34ed5d89d8db22bce6b84ff1477p12@CD36

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0005020&oldid=3275572"