UBERON:0004340: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=a diverticulum of the hindgut endoderm [ISBN10:0073040584 "Vertebrates, Kardong"] | |comment=a diverticulum of the hindgut endoderm [ISBN10:0073040584 "Vertebrates, Kardong"] | ||
|created_by= | |created_by= | ||
| | |def="Allantois (plural allantoides or allantoises) is a part of a developing animal conceptus (which consists of all embryonic and extra-embryonic tissues). It helps the embryo exchange gases and handle liquid waste. The allantois, along with the amnion and chorion (other embryonic membranes), identify humans as amniotes, along with reptiles, dinosaurs, birds, and other mammals. Of the vertebrates, only Ichthyopsidas lack this structure. [WP,unvetted]." [MP:0001726, Wikipedia:Allantois] | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0000925;;UBERON:0004872 | |develops_from=UBERON:0000925;;UBERON:0001040;;UBERON:0004872 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004340 | |||
|is_a=UBERON:0000077 ;;UBERON:0005631 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=allantois | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001008 | |part_of=UBERON:0001008 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=BTO:0000474;;EHDAA2:0000113;;EMAPA:16084;;EMAPA:16107;;EMAPA:28547;;http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray25.png;;MESH:A.16.254.403.147;;ncithesaurus:Allantois;;RETIRED_EHDAA2:0000114;;SCTID:308825007;;VHOG:0000738 | |||
}} | }} | ||
Latest revision as of 17:45, 12 September 2014
| Name: | allantois | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Allantois (plural allantoides or allantoises) is a part of a developing animal conceptus (which consists of all embryonic and extra-embryonic tissues). It helps the embryo exchange gases and handle liquid waste. The allantois, along with the amnion and chorion (other embryonic membranes), identify humans as amniotes, along with reptiles, dinosaurs, birds, and other mammals. Of the vertebrates, only Ichthyopsidas lack this structure. [WP,unvetted]." [MP:0001726, Wikipedia:Allantois] | ||
| Xrefs: |
| ||
| Comments: | a diverticulum of the hindgut endoderm [ISBN10:0073040584 "Vertebrates, Kardong"] |
Gray25.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000077(mixed endoderm/mesoderm-derived structure),UBERON:0005631(extraembryonic membrane) |
|---|---|
| develops_from: | UBERON:0000925(endoderm),UBERON:0001040(yolk sac),UBERON:0004872(splanchnic layer of lateral plate mesoderm) |
| part_of: | UBERON:0001008(renal system) |
Children
| develops from: | UBERON:0001987 (placenta) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004340 (allantois), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.23e-89 | FFCP PHASE2:Hg19::chr11:1982869..1982890,+#_816894c4c5c6fd96126509a6e80d17bd | p@chr11:1982869..1982890, + |
| 4.23e-89 | FFCP PHASE1:Hg19::chr11:1982869..1982890,+#_816894c4c5c6fd96126509a6e80d17bd | p@chr11:1982869..1982890, + |
| 7.73e-89 | FFCP PHASE1:Hg19::chr5:153858046..153858049,+#_1b459b5971c098717e99a35d979e6039 | p@chr5:153858046..153858049, + |
| 7.73e-89 | FFCP PHASE2:Hg19::chr5:153858046..153858049,+#_1b459b5971c098717e99a35d979e6039 | p@chr5:153858046..153858049, + |
| 1.04e-88 | FFCP PHASE2:Hg19::chr5:153854787..153854796,-#_2563ba07536b5b63c6d4f5c5ddbf69c6 | p@chr5:153854787..153854796, - |
| 1.04e-88 | FFCP PHASE1:Hg19::chr5:153854787..153854796,-#_2563ba07536b5b63c6d4f5c5ddbf69c6 | p@chr5:153854787..153854796, - |
| 1.41e-88 | FFCP PHASE1:Hg19::chr1:209704573..209704587,+#_88cbe8b54338bc2a0b9709155d4a6fa4 | p@chr1:209704573..209704587, + |
| 1.41e-88 | FFCP PHASE2:Hg19::chr1:209704573..209704587,+#_88cbe8b54338bc2a0b9709155d4a6fa4 | p@chr1:209704573..209704587, + |
| 1.91e-88 | FFCP PHASE2:Hg19::chr1:209704648..209704656,+#_23f28e5a2c3825c6cf850382063313de | p@chr1:209704648..209704656, + |
| 1.91e-88 | FFCP PHASE1:Hg19::chr1:209704648..209704656,+#_23f28e5a2c3825c6cf850382063313de | p@chr1:209704648..209704656, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:27335655..27335658,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:27335655..27335658, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:8927606..8927607,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr17:8927606..8927607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:97907005..97907011,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr6:97907005..97907011, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:121053540..121053548,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr6:121053540..121053548, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:92613101..92613124,+#_2d849d438885b6fee22ee0ccf504d888 | p2@ENSMUST00000148919 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:17788884..17788890,+#_2d849d438885b6fee22ee0ccf504d888 | p3@Psg29 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:35991777..35991786,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr17:35991777..35991786, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:27734346..27734351,-#_2d849d438885b6fee22ee0ccf504d888 | p2@Prl7a1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:27440741..27440750,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:27440741..27440750, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:61041595..61041607,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:61041595..61041607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:27335655..27335658,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:27335655..27335658, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:89171538..89171544,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr3:89171538..89171544, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:17788884..17788890,+#_2d849d438885b6fee22ee0ccf504d888 | p3@Psg29 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:121053540..121053548,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr6:121053540..121053548, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:4310640..4310648,+#_2d849d438885b6fee22ee0ccf504d888 | p59@Frmd4a |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:27337717..27337754,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:27337717..27337754, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:27440741..27440750,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:27440741..27440750, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:55273056..55273059,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr14:55273056..55273059, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:61041595..61041607,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:61041595..61041607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:4310640..4310648,+#_2d849d438885b6fee22ee0ccf504d888 | p59@Frmd4a |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:137716644..137716651,-#_2d849d438885b6fee22ee0ccf504d888 | p5@Nsmce4a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:8927606..8927607,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr17:8927606..8927607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:35991777..35991786,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr17:35991777..35991786, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:137716644..137716651,-#_2d849d438885b6fee22ee0ccf504d888 | p5@Nsmce4a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43250181..43250190,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:43250181..43250190, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:27337717..27337754,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:27337717..27337754, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:140663013..140663022,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr4:140663013..140663022, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:69915427..69915460,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr14:69915427..69915460, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:89171538..89171544,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr3:89171538..89171544, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43250181..43250190,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr13:43250181..43250190, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:69915427..69915460,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr14:69915427..69915460, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:92613101..92613124,+#_2d849d438885b6fee22ee0ccf504d888 | p2@ENSMUST00000148919 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:27734346..27734351,-#_2d849d438885b6fee22ee0ccf504d888 | p2@Prl7a1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:55273056..55273059,-#_2d849d438885b6fee22ee0ccf504d888 | p@chr14:55273056..55273059, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:97907005..97907011,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr6:97907005..97907011, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:140663013..140663022,+#_2d849d438885b6fee22ee0ccf504d888 | p@chr4:140663013..140663022, + |
| 1.21e-74 | FFCP PHASE2:Hg19::chr20:36794938..36794945,-#_5c0038b884d65212397a2cce4c050397 | p45@TGM2 |
| 1.21e-74 | FFCP PHASE1:Hg19::chr20:36794938..36794945,-#_5c0038b884d65212397a2cce4c050397 | p45@TGM2 |
| 2.01e-74 | FFCP PHASE1:Hg19::chr8:22034506..22034518,+#_a57342ad896b42957c670b644bcc6df9 | p@chr8:22034506..22034518, + |
| 2.01e-74 | FFCP PHASE1:Hg19::chr14:24729174..24729183,-#_a57342ad896b42957c670b644bcc6df9 | p17@TGM1 |
| 2.01e-74 | FFCP PHASE2:Hg19::chr8:22034506..22034518,+#_a57342ad896b42957c670b644bcc6df9 | p@chr8:22034506..22034518, + |
| 2.01e-74 | FFCP PHASE2:Hg19::chr14:24729174..24729183,-#_a57342ad896b42957c670b644bcc6df9 | p17@TGM1 |
| 3.32e-74 | FFCP PHASE2:Hg19::chr3:134044856..134044890,+#_c5d0f3b7d366e4f0c3305eae7ca35ac8 | p@chr3:134044856..134044890, + |
| 3.32e-74 | FFCP PHASE2:Hg19::chr5:89143573..89143607,-#_c5d0f3b7d366e4f0c3305eae7ca35ac8 | p@chr5:89143573..89143607, - |
| 3.32e-74 | FFCP PHASE1:Hg19::chr3:134044856..134044890,+#_c5d0f3b7d366e4f0c3305eae7ca35ac8 | p@chr3:134044856..134044890, + |
| 3.32e-74 | FFCP PHASE1:Hg19::chr5:89143573..89143607,-#_c5d0f3b7d366e4f0c3305eae7ca35ac8 | p@chr5:89143573..89143607, - |
| 4.26e-74 | FFCP PHASE1:Hg19::chr3:55384353..55384357,+#_d1b3e67df711bfe3db23c3260ab33237 | p@chr3:55384353..55384357, + |
| 4.26e-74 | FFCP PHASE2:Hg19::chr3:55384353..55384357,+#_d1b3e67df711bfe3db23c3260ab33237 | p@chr3:55384353..55384357, + |
| 5.48e-74 | FFCP PHASE2:Hg19::chr1:209704612..209704625,+#_c5d0131fb1493ef388d4dfc8d7fcfa3f | p@chr1:209704612..209704625, + |
| 5.48e-74 | FFCP PHASE1:Hg19::chr1:209704612..209704625,+#_c5d0131fb1493ef388d4dfc8d7fcfa3f | p@chr1:209704612..209704625, + |
| 7.04e-74 | FFCP PHASE1:Hg19::chr17:37824598..37824605,+#_8f1842016515a0ce01a005f8a0a82a65 | p15@PNMT |
| 7.04e-74 | FFCP PHASE2:Hg19::chr17:37824598..37824605,+#_8f1842016515a0ce01a005f8a0a82a65 | p15@PNMT |
| 4.67e-66 | FFCP PHASE1:Hg19::chr12:51785088..51785093,-#_a5b8e4b987be50e7c9cded2481f10f2d | p12@GALNT6 |
| 4.67e-66 | FFCP PHASE2:Hg19::chr12:51785088..51785093,-#_a5b8e4b987be50e7c9cded2481f10f2d | p12@GALNT6 |
| 2.61e-64 | FFCP PHASE1:Hg19::chr14:104202639..104202646,-#_3dee8c5aa7885a0e0bbbca91d875acd0 | p@chr14:104202639..104202646, - |
| 2.61e-64 | FFCP PHASE2:Hg19::chr14:104202639..104202646,-#_3dee8c5aa7885a0e0bbbca91d875acd0 | p@chr14:104202639..104202646, - |
| 3.24e-64 | FFCP PHASE2:Hg19::chr9:112300690..112300705,-#_c4cea0752ec7d2448319673e44bb2116 | p@chr9:112300690..112300705, - |
| 3.24e-64 | FFCP PHASE1:Hg19::chr5:153855055..153855066,-#_c4cea0752ec7d2448319673e44bb2116 | p@chr5:153855055..153855066, - |
| 3.24e-64 | FFCP PHASE2:Hg19::chr9:88126069..88126080,-#_c4cea0752ec7d2448319673e44bb2116 | p@chr9:88126069..88126080, - |
| 3.24e-64 | FFCP PHASE1:Hg19::chr9:112300690..112300705,-#_c4cea0752ec7d2448319673e44bb2116 | p@chr9:112300690..112300705, - |
| 3.24e-64 | FFCP PHASE1:Hg19::chr9:88126069..88126080,-#_c4cea0752ec7d2448319673e44bb2116 | p@chr9:88126069..88126080, - |
| 3.24e-64 | FFCP PHASE2:Hg19::chr5:153855055..153855066,-#_c4cea0752ec7d2448319673e44bb2116 | p@chr5:153855055..153855066, - |
| 4.02e-64 | FFCP PHASE2:Hg19::chr20:61288222..61288232,+#_cac46286be9b28ba5397a0939a3e90b0 | p14@SLCO4A1 |
| 4.02e-64 | FFCP PHASE1:Hg19::chr17:37824217..37824226,+#_cac46286be9b28ba5397a0939a3e90b0 | p12@PNMT |
| 4.02e-64 | FFCP PHASE2:Hg19::chr17:37824217..37824226,+#_cac46286be9b28ba5397a0939a3e90b0 | p12@PNMT |
| 4.02e-64 | FFCP PHASE1:Hg19::chr20:61288222..61288232,+#_cac46286be9b28ba5397a0939a3e90b0 | p14@SLCO4A1 |
| 6.18e-64 | FFCP PHASE1:Hg19::chr2:25704561..25704572,-#_9c1e761600b7f22da4f262212bd92f70 | p20@DTNB |
| 6.18e-64 | FFCP PHASE2:Hg19::chr2:25704561..25704572,-#_9c1e761600b7f22da4f262212bd92f70 | p20@DTNB |
| 9.51e-64 | FFCP PHASE2:Hg19::chr5:170239966..170239982,+#_381432ada4b2c412d368d77e34e59d9b | p@chr5:170239966..170239982, + |
| 9.51e-64 | FFCP PHASE1:Hg19::chr5:170239966..170239982,+#_381432ada4b2c412d368d77e34e59d9b | p@chr5:170239966..170239982, + |
| 1.46e-63 | FFCP PHASE2:Hg19::chr10:131344593..131344605,+#_7962de86c6844f18a65a129f51f2421a | p@chr10:131344593..131344605, + |
| 1.46e-63 | FFCP PHASE1:Hg19::chr10:131344593..131344605,+#_7962de86c6844f18a65a129f51f2421a | p@chr10:131344593..131344605, + |
| 1.81e-63 | FFCP PHASE2:Hg19::chr5:170176045..170176055,-#_f3d242c40ac6db860b828286a1a15738 | p@chr5:170176045..170176055, - |
| 1.81e-63 | FFCP PHASE1:Hg19::chr5:170176045..170176055,-#_f3d242c40ac6db860b828286a1a15738 | p@chr5:170176045..170176055, - |
| 5.76e-61 | FFCP PHASE1:Hg19::chr3:55384975..55384986,-#_ee3c8e30bddeeb846654fefa274b80de | p1@ENST00000469806 |
| 5.76e-61 | FFCP PHASE2:Hg19::chr3:55384975..55384986,-#_ee3c8e30bddeeb846654fefa274b80de | p1@ENST00000469806 |
| 4.28e-60 | FFCP PHASE2:Hg19::chr15:68344995..68345013,+#_1c9f6929fd79d3447a75dc84687609e1 | p@chr15:68344995..68345013, + |
| 4.28e-60 | FFCP PHASE1:Hg19::chr15:68344995..68345013,+#_1c9f6929fd79d3447a75dc84687609e1 | p@chr15:68344995..68345013, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr13:27339701..27339760,+#_a51e87fa9f6a1c0921bb93ba101c6b9f | p@chr13:27339701..27339760, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr11:55223511..55223524,-#_a51e87fa9f6a1c0921bb93ba101c6b9f | p@chr11:55223511..55223524, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr5:125523193..125523196,-#_a51e87fa9f6a1c0921bb93ba101c6b9f | p23@Ncor2 |
| 1.68e-58 | FFCP PHASE2:Mm9::chr9:111108246..111108253,+#_a51e87fa9f6a1c0921bb93ba101c6b9f | p@chr9:111108246..111108253, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr7:17788842..17788851,+#_a51e87fa9f6a1c0921bb93ba101c6b9f | p2@Psg29 |
| 1.68e-58 | FFCP PHASE2:Mm9::chr5:125523193..125523196,-#_a51e87fa9f6a1c0921bb93ba101c6b9f | p23@Ncor2 |
| 1.68e-58 | FFCP PHASE2:Mm9::chr6:48879890..48879896,+#_a51e87fa9f6a1c0921bb93ba101c6b9f | p1@1600015I10Rik |
| 1.68e-58 | FFCP PHASE1:Mm9::chr13:61265572..61265576,-#_a51e87fa9f6a1c0921bb93ba101c6b9f | p2@Ctsr |
| 1.68e-58 | FFCP PHASE1:Mm9::chr13:27339701..27339760,+#_a51e87fa9f6a1c0921bb93ba101c6b9f | p@chr13:27339701..27339760, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr13:33048652..33048685,+#_a51e87fa9f6a1c0921bb93ba101c6b9f | p@chr13:33048652..33048685, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr1:71787899..71787904,-#_a51e87fa9f6a1c0921bb93ba101c6b9f | p@chr1:71787899..71787904, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr5:115211954..115211984,-#_a51e87fa9f6a1c0921bb93ba101c6b9f | p@chr5:115211954..115211984, - |
