UBERON:0011159: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0011159 | |||
|is_a=UBERON:0000075 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=primary subdivision of cranial skeletal system | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0010323 | |part_of=UBERON:0010323 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 18:10, 12 September 2014
| Name: | primary subdivision of cranial skeletal system |
|---|---|
| Namespace: | FANTOM |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000075(subdivision of skeletal system) |
|---|---|
| part_of: | UBERON:0010323(cranial skeletal system) |
Children
| is a: | UBERON:0002241 (chondrocranium),UBERON:0003113 (dermatocranium),UBERON:0008895 (splanchnocranium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10195-103E6 (olfactory region, adult)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11929-125I3 (Mallassez-derived cells, donor2)
- 11930-125I4 (Mallassez-derived cells, donor3)
- 12142-128E9 (Mallassez-derived cells, donor1 (MZH3))
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011159 (primary subdivision of cranial skeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.76e-118 | FFCP PHASE1:Hg19::chr22:23586671..23586679,+#_4851119495b275182ec388e791fb8e59 | p@chr22:23586671..23586679, + |
| 7.76e-118 | FFCP PHASE2:Hg19::chr22:23586671..23586679,+#_4851119495b275182ec388e791fb8e59 | p@chr22:23586671..23586679, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr9:22256680..22256685,+#_9fe573c1564d58c143d3fe11ebfdc7f1 | p@chr9:22256680..22256685, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr8:7752197..7752201,+#_9fe573c1564d58c143d3fe11ebfdc7f1 | p1@DEFB4A |
| 3.49e-79 | FFCP PHASE1:Hg19::chr8:7752197..7752201,+#_9fe573c1564d58c143d3fe11ebfdc7f1 | p1@DEFB4A |
| 3.49e-79 | FFCP PHASE2:Hg19::chr9:22256680..22256685,+#_9fe573c1564d58c143d3fe11ebfdc7f1 | p@chr9:22256680..22256685, + |
| 3.49e-79 | FFCP PHASE1:Hg19::chr10:106205565..106205599,+#_9fe573c1564d58c143d3fe11ebfdc7f1 | p@chr10:106205565..106205599, + |
| 3.49e-79 | FFCP PHASE2:Hg19::chr10:106205565..106205599,+#_9fe573c1564d58c143d3fe11ebfdc7f1 | p@chr10:106205565..106205599, + |
| 1.56e-71 | FFCP PHASE1:Hg19::chr10:106205503..106205518,+#_c94503eabddfd9dfbe3b0fa1026e10a4 | p@chr10:106205503..106205518, + |
| 1.56e-71 | FFCP PHASE2:Hg19::chr10:106205503..106205518,+#_c94503eabddfd9dfbe3b0fa1026e10a4 | p@chr10:106205503..106205518, + |
| 1.98e-71 | FFCP PHASE1:Hg19::chr17:18343257..18343267,+#_add32032e1930b7ae98482b73bbd2f5b | p2@KRT16P1 |
| 1.98e-71 | FFCP PHASE2:Hg19::chr17:18343257..18343267,+#_add32032e1930b7ae98482b73bbd2f5b | p2@KRT16P1 |
| 2.52e-71 | FFCP PHASE1:Hg19::chr16:80068152..80068165,-#_db22b4dca030f67cbc48e136d6dd10fa | p@chr16:80068152..80068165, - |
| 2.52e-71 | FFCP PHASE2:Hg19::chr16:80068152..80068165,-#_db22b4dca030f67cbc48e136d6dd10fa | p@chr16:80068152..80068165, - |
| 9.01e-60 | FFCP PHASE1:Hg19::chr11:102140952..102140956,+#_79420b7090eab734abebb08cb33289f8 | p@chr11:102140952..102140956, + |
| 9.01e-60 | FFCP PHASE2:Hg19::chr11:102140952..102140956,+#_79420b7090eab734abebb08cb33289f8 | p@chr11:102140952..102140956, + |
| 3.67e-59 | FFCP PHASE2:Hg19::chr4:143470541..143470551,+#_c14cab7677dd71399ef89f2ec257f5b5 | p@chr4:143470541..143470551, + |
| 3.67e-59 | FFCP PHASE1:Hg19::chr4:143470541..143470551,+#_c14cab7677dd71399ef89f2ec257f5b5 | p@chr4:143470541..143470551, + |
| 2.87e-53 | FFCP PHASE2:Hg19::chr16:57954541..57954548,-#_d5cebf5154f7c7f307c618586444ef5b | p@chr16:57954541..57954548, - |
| 2.87e-53 | FFCP PHASE1:Hg19::chr16:57954541..57954548,-#_d5cebf5154f7c7f307c618586444ef5b | p@chr16:57954541..57954548, - |
| 1.15e-51 | FFCP PHASE1:Hg19::chr7:137570496..137570504,-#_4dddf4f0a6b24d256ea702a676cb7c05 | p@chr7:137570496..137570504, - |
| 1.15e-51 | FFCP PHASE2:Hg19::chr7:137570496..137570504,-#_4dddf4f0a6b24d256ea702a676cb7c05 | p@chr7:137570496..137570504, - |
| 1.37e-51 | FFCP PHASE1:Hg19::chr1:7447129..7447134,+#_06f28f17fbb3ac2f21164d4baf801380 | p@chr1:7447129..7447134, + |
| 1.37e-51 | FFCP PHASE2:Hg19::chr1:7447129..7447134,+#_06f28f17fbb3ac2f21164d4baf801380 | p@chr1:7447129..7447134, + |
| 2.3e-51 | FFCP PHASE1:Hg19::chr3:47155553..47155568,-#_9f49fe2a449fd150eadce7515d7d55b1 | p@chr3:47155553..47155568, - |
| 2.3e-51 | FFCP PHASE1:Hg19::chr21:44168074..44168079,+#_9f49fe2a449fd150eadce7515d7d55b1 | p@chr21:44168074..44168079, + |
| 2.3e-51 | FFCP PHASE2:Hg19::chr3:47155553..47155568,-#_9f49fe2a449fd150eadce7515d7d55b1 | p@chr3:47155553..47155568, - |
| 2.3e-51 | FFCP PHASE2:Hg19::chr21:44168074..44168079,+#_9f49fe2a449fd150eadce7515d7d55b1 | p@chr21:44168074..44168079, + |
| 2.56e-45 | FFCP PHASE1:Hg19::chr10:106205489..106205498,+#_7c2e40a023f563d6105eab9fa87bb07d | p@chr10:106205489..106205498, + |
| 2.56e-45 | FFCP PHASE2:Hg19::chr10:106205489..106205498,+#_7c2e40a023f563d6105eab9fa87bb07d | p@chr10:106205489..106205498, + |
| 5.45e-45 | FFCP PHASE2:Hg19::chr18:20493912..20493923,+#_c4ff9dc9b689f71e06ad26a79a202a95 | p@chr18:20493912..20493923, + |
| 5.45e-45 | FFCP PHASE1:Hg19::chr18:20493912..20493923,+#_c4ff9dc9b689f71e06ad26a79a202a95 | p@chr18:20493912..20493923, + |
| 6.33e-45 | FFCP PHASE2:Hg19::chr18:9649081..9649088,+#_2e9aa8e25474734f48f4333337546bbb | p@chr18:9649081..9649088, + |
| 6.33e-45 | FFCP PHASE1:Hg19::chr18:9649081..9649088,+#_2e9aa8e25474734f48f4333337546bbb | p@chr18:9649081..9649088, + |
| 1.48e-40 | FFCP PHASE1:Hg19::chr4:155387574..155387588,-#_cdbc48d1e1d4adc9b8817acf42609339 | p@chr4:155387574..155387588, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_cdbc48d1e1d4adc9b8817acf42609339 | p14@C17orf67 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr21:27558561..27558565,-#_cdbc48d1e1d4adc9b8817acf42609339 | p@chr21:27558561..27558565, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_cdbc48d1e1d4adc9b8817acf42609339 | p14@C17orf67 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr4:155387574..155387588,-#_cdbc48d1e1d4adc9b8817acf42609339 | p@chr4:155387574..155387588, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr21:27558561..27558565,-#_cdbc48d1e1d4adc9b8817acf42609339 | p@chr21:27558561..27558565, - |
| 1.7e-40 | FFCP PHASE1:Hg19::chr1:116072140..116072172,+#_5ad4af56881184654940491c11376553 | p@chr1:116072140..116072172, + |
| 1.7e-40 | FFCP PHASE2:Hg19::chr1:116072140..116072172,+#_5ad4af56881184654940491c11376553 | p@chr1:116072140..116072172, + |
| 1.81e-40 | FFCP PHASE2:Hg19::chr9:16094653..16094654,+#_0e6152b187ceb9abc0577bf26cbc1f5f | p@chr9:16094653..16094654, + |
| 1.81e-40 | FFCP PHASE1:Hg19::chr9:16094653..16094654,+#_0e6152b187ceb9abc0577bf26cbc1f5f | p@chr9:16094653..16094654, + |
| 2.71e-40 | FFCP PHASE2:Hg19::chr9:27524670..27524673,+#_0c4f642b57b7f3b81350a9a59e622ee2 | p5@IFNK |
| 2.71e-40 | FFCP PHASE1:Hg19::chr9:27524670..27524673,+#_0c4f642b57b7f3b81350a9a59e622ee2 | p5@IFNK |
| 2.91e-40 | FFCP PHASE1:Hg19::chr14:81221483..81221489,+#_b7de1d6d99b5f2ab5371f500ca62391f | p@chr14:81221483..81221489, + |
| 2.91e-40 | FFCP PHASE2:Hg19::chr14:81221483..81221489,+#_b7de1d6d99b5f2ab5371f500ca62391f | p@chr14:81221483..81221489, + |
| 3.81e-40 | FFCP PHASE1:Hg19::chr8:141728760..141728771,-#_39135e32e1a4639554c1bea8b08585e5 | p36@PTK2 |
| 3.81e-40 | FFCP PHASE2:Hg19::chr8:141728760..141728771,-#_39135e32e1a4639554c1bea8b08585e5 | p36@PTK2 |
| 2.26e-36 | FFCP PHASE1:Hg19::chr12:98739159..98739191,-#_c4b0fc7339d8bc13c0a1170bae77733b | p@chr12:98739159..98739191, - |
| 2.26e-36 | FFCP PHASE2:Hg19::chr12:98739159..98739191,-#_c4b0fc7339d8bc13c0a1170bae77733b | p@chr12:98739159..98739191, - |
| 2.26e-36 | FFCP PHASE1:Hg19::chr18:20493879..20493891,+#_c4b0fc7339d8bc13c0a1170bae77733b | p@chr18:20493879..20493891, + |
| 2.26e-36 | FFCP PHASE2:Hg19::chr18:20493879..20493891,+#_c4b0fc7339d8bc13c0a1170bae77733b | p@chr18:20493879..20493891, + |
| 2.88e-36 | FFCP PHASE1:Hg19::chr8:124850358..124850380,+#_58b584f6cad8797adeb983e1a22839bc | p@chr8:124850358..124850380, + |
| 2.88e-36 | FFCP PHASE2:Hg19::chr8:124850358..124850380,+#_58b584f6cad8797adeb983e1a22839bc | p@chr8:124850358..124850380, + |
| 1.43e-33 | FFCP PHASE1:Hg19::chr5:167247865..167247872,+#_3e40e7828bd2d827a81d46a2428dc783 | p23@ODZ2 |
| 1.43e-33 | FFCP PHASE2:Hg19::chr5:167247865..167247872,+#_3e40e7828bd2d827a81d46a2428dc783 | p23@ODZ2 |
| 1.79e-33 | FFCP PHASE1:Hg19::chr13:30259768..30259777,+#_c18eb8aba04b46b0ba08fd2494948999 | p@chr13:30259768..30259777, + |
| 1.79e-33 | FFCP PHASE2:Hg19::chr13:30259768..30259777,+#_c18eb8aba04b46b0ba08fd2494948999 | p@chr13:30259768..30259777, + |
| 2.78e-33 | FFCP PHASE1:Hg19::chr16:57954525..57954533,-#_f4112c77e5ff178c2316f24c59d901bf | p@chr16:57954525..57954533, - |
| 2.78e-33 | FFCP PHASE2:Hg19::chr16:57954525..57954533,-#_f4112c77e5ff178c2316f24c59d901bf | p@chr16:57954525..57954533, - |
| 8.3e-33 | FFCP PHASE2:Hg19::chr1:153113940..153113972,-#_25adbf539f299a5e1a14672098ad4d70 | p1@SPRR2C, p2@SPRR2D, p3@SPRR2A |
| 8.3e-33 | FFCP PHASE1:Hg19::chr1:153113940..153113972,-#_25adbf539f299a5e1a14672098ad4d70 | p1@SPRR2C, p2@SPRR2D, p3@SPRR2A |
| 1.05e-32 | FFCP PHASE1:Hg19::chr12:28299014..28299023,+#_c7c9d2d78dfd6b3acce3327da2b97772 | p20@CCDC91 |
| 1.05e-32 | FFCP PHASE2:Hg19::chr12:28299014..28299023,+#_c7c9d2d78dfd6b3acce3327da2b97772 | p20@CCDC91 |
| 1.15e-32 | FFCP PHASE2:Hg19::chr5:167247103..167247112,+#_6dbbca30f155431acc5a78ce022ee922 | p@chr5:167247103..167247112, + |
| 1.15e-32 | FFCP PHASE1:Hg19::chr5:167247103..167247112,+#_6dbbca30f155431acc5a78ce022ee922 | p@chr5:167247103..167247112, + |
| 2.74e-32 | FFCP PHASE2:Hg19::chr8:144414013..144414023,-#_0530c14a42b37632f3ff076c43b7120a | p8@TOP1MT |
| 2.74e-32 | FFCP PHASE1:Hg19::chr8:144414013..144414023,-#_0530c14a42b37632f3ff076c43b7120a | p8@TOP1MT |
| 1.28e-30 | FFCP PHASE1:Hg19::chr12:28116496..28116507,-#_135c3fe07788ee847adc56b0ece6b4a8 | p@chr12:28116496..28116507, - |
| 1.28e-30 | FFCP PHASE2:Hg19::chr12:28116496..28116507,-#_135c3fe07788ee847adc56b0ece6b4a8 | p@chr12:28116496..28116507, - |
| 1.81e-30 | FFCP PHASE1:Hg19::chr4:153273701..153273710,-#_9773d78d6744aaec74a598ac4d74f539 | p14@FBXW7 |
| 1.81e-30 | FFCP PHASE2:Hg19::chr4:153273701..153273710,-#_9773d78d6744aaec74a598ac4d74f539 | p14@FBXW7 |
| 1.74e-28 | FFCP PHASE2:Hg19::chr7:137570475..137570486,-#_f56fe6caf64594ba1385e1a63fdee973 | p@chr7:137570475..137570486, - |
| 1.74e-28 | FFCP PHASE1:Hg19::chr7:137570475..137570486,-#_f56fe6caf64594ba1385e1a63fdee973 | p@chr7:137570475..137570486, - |
| 2.53e-28 | FFCP PHASE1:Hg19::chr10:47746929..47746964,+#_34eeac75b5aaa09b6304b573b7835af7 | p1@ANXA8L2 |
| 2.53e-28 | FFCP PHASE2:Hg19::chr10:47746929..47746964,+#_34eeac75b5aaa09b6304b573b7835af7 | p1@ANXA8L2 |
| 1.82e-27 | FFCP PHASE2:Hg19::chr9:27524417..27524425,+#_f2006f13f3eb3cac174222f528ceafe3 | p4@IFNK |
| 1.82e-27 | FFCP PHASE1:Hg19::chr9:27524417..27524425,+#_f2006f13f3eb3cac174222f528ceafe3 | p4@IFNK |
| 3.11e-27 | FFCP PHASE2:Hg19::chr4:71388662..71388695,+#_295b51c833bb97dfe2bd0506596f4695 | p@chr4:71388662..71388695, + |
| 3.11e-27 | FFCP PHASE1:Hg19::chr17:18343216..18343225,+#_295b51c833bb97dfe2bd0506596f4695 | p1@KRT16P1 |
| 3.11e-27 | FFCP PHASE2:Hg19::chr17:18343216..18343225,+#_295b51c833bb97dfe2bd0506596f4695 | p1@KRT16P1 |
| 3.11e-27 | FFCP PHASE1:Hg19::chr4:71388662..71388695,+#_295b51c833bb97dfe2bd0506596f4695 | p@chr4:71388662..71388695, + |
| 1.4e-26 | FFCP PHASE2:Hg19::chr18:9617195..9617198,-#_85030a906cca54da2f690326882a0dc5 | p@chr18:9617195..9617198, - |
| 1.4e-26 | FFCP PHASE1:Hg19::chr18:9617195..9617198,-#_85030a906cca54da2f690326882a0dc5 | p@chr18:9617195..9617198, - |
| 1.98e-26 | FFCP PHASE1:Hg19::chr11:13073062..13073067,+#_fa639f8695e481b148996d7a206bb6e6 | p@chr11:13073062..13073067, + |
| 1.98e-26 | FFCP PHASE2:Hg19::chr11:13073062..13073067,+#_fa639f8695e481b148996d7a206bb6e6 | p@chr11:13073062..13073067, + |
| 2.35e-26 | FFCP PHASE1:Hg19::chr11:93754316..93754353,+#_24198fec2df1803bdf3e10a2e79e6b1b | p2@HEPHL1 |
| 2.35e-26 | FFCP PHASE2:Hg19::chr11:93754316..93754353,+#_24198fec2df1803bdf3e10a2e79e6b1b | p2@HEPHL1 |
| 2.35e-26 | FFCP PHASE1:Hg19::chr12:47182487..47182490,-#_24198fec2df1803bdf3e10a2e79e6b1b | p@chr12:47182487..47182490, - |
| 2.35e-26 | FFCP PHASE2:Hg19::chr12:47182487..47182490,-#_24198fec2df1803bdf3e10a2e79e6b1b | p@chr12:47182487..47182490, - |
| 2.79e-26 | FFCP PHASE1:Hg19::chr6:29643393..29643442,-#_c3959b930cdedaf4ae7e29f00d676ef6 | p@chr6:29643393..29643442, - |
| 2.79e-26 | FFCP PHASE1:Hg19::chr1:242927602..242927613,-#_c3959b930cdedaf4ae7e29f00d676ef6 | p@chr1:242927602..242927613, - |
| 2.79e-26 | FFCP PHASE2:Hg19::chr6:29643393..29643442,-#_c3959b930cdedaf4ae7e29f00d676ef6 | p@chr6:29643393..29643442, - |
| 2.79e-26 | FFCP PHASE2:Hg19::chr1:242927602..242927613,-#_c3959b930cdedaf4ae7e29f00d676ef6 | p@chr1:242927602..242927613, - |
| 3.32e-26 | FFCP PHASE2:Hg19::chr15:42566543..42566553,+#_46fdd9e015f4e502d10b399eeba8df62 | p11@GANC |
| 3.32e-26 | FFCP PHASE1:Hg19::chr15:42566543..42566553,+#_46fdd9e015f4e502d10b399eeba8df62 | p11@GANC |
| 4.29e-26 | FFCP PHASE2:Hg19::chr8:105212349..105212367,+#_5e1482008890d35b71705e48c699d5a4 | p@chr8:105212349..105212367, + |
| 4.29e-26 | FFCP PHASE1:Hg19::chr8:105212349..105212367,+#_5e1482008890d35b71705e48c699d5a4 | p@chr8:105212349..105212367, + |
