FFCP PHASE1:Hg19::chr1:103544421..103544430,-: Difference between revisions
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|id=chr1:103544421..103544430,-
|short_description=p@chr1:103544421..103544430,-
|description=CAGE_peak_at_chr1:103544421..103544430,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:103544421..103544430,- | |||
|coexpression_cluster_id=C926 | |||
|description=CAGE_peak_at_chr1:103544421..103544430,- | |||
|id=chr1:103544421..103544430,- | |||
|ontology_enrichment_celltype=CL:0000055!7.79e-09!180;CL:0002615!1.59e-07!3;CL:0002580!5.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.04e-18;3!CL:0002580;1.42e-18;3!CL:0002579;1.42e-18;3!CL:0002334;6.92e-18;12!CL:0000136;1.12e-16;13!CL:0002616;2.41e-14;1!CL:0000138;8.11e-10;6!CL:0002617;3.56e-08;2!CL:0002549;4.85e-08;2!CL:0000153;7.87e-07;9!CL:0000447;7.87e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,8.69e-19,3;CL:0002580,1.36e-18,3;CL:0002579,1.94e-18,3;CL:0002334,7.89e-18,12;CL:0000136,1.53e-14,15;CL:0002616,2.11e-14,1;CL:0000058,8.11e-10,6;CL:0000138,8.11e-10,6;CL:0002617,3.56e-08,2;CL:0002549,4.69e-08,2;CL:0000153,7.87e-07,9;CL:0000447,7.87e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!2.45e-10!11;UBERON:0006876!2.45e-10!11;UBERON:0005284!5.73e-10!5;UBERON:0003688!2.07e-09!6;UBERON:0002358!2.07e-09!6;UBERON:0003684!2.07e-09!6;UBERON:0001178!2.07e-09!6;UBERON:0000475!4.32e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.72e-35;6!UBERON:0002358;1.72e-35;6!UBERON:0003684;1.72e-35;6!UBERON:0001178;1.72e-35;6!UBERON:0004457;8.23e-24;9!UBERON:0000042;8.23e-24;9!UBERON:0000310;1.20e-12;10!UBERON:0001443;1.50e-11;11!UBERON:0005629;4.85e-08;2!UBERON:0005358;4.85e-08;2!UBERON:0001886;4.85e-08;2!UBERON:0004086;4.85e-08;2!UBERON:0005282;4.85e-08;2!UBERON:0005281;4.85e-08;2!UBERON:0005406;8.04e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.96e-35,6;UBERON:0002358,1.96e-35,6;UBERON:0003684,1.96e-35,6;UBERON:0001178,1.96e-35,6;UBERON:0004457,6.34e-18,12;UBERON:0000042,6.34e-18,12;UBERON:0000310,1.18e-12,10;UBERON:0001443,1.47e-11,11;UBERON:0005629,4.69e-08,2;UBERON:0005358,4.69e-08,2;UBERON:0001886,4.69e-08,2;UBERON:0004086,4.69e-08,2;UBERON:0005282,4.69e-08,2;UBERON:0005281,4.69e-08,2;UBERON:0005406,7.52e-08,2;UBERON:0009569,8.00e-07,112 | |||
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| ||
|short_description=p@chr1:103544421..103544430,- | |||
}} | }} |
Latest revision as of 19:04, 27 July 2015
Short description: | p@chr1:103544421..103544430, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:103544421..103544430, - |
Coexpression cluster: | C926_Chondrocyte_Adipocyte_tenocyte_Wilms_Preadipocyte_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 8.69e-19 | 3 |
preadipocyte of the breast | 1.36e-18 | 3 |
omentum preadipocyte | 1.94e-18 | 3 |
preadipocyte | 7.89e-18 | 12 |
fat cell | 1.53e-14 | 15 |
perirenal adipocyte cell | 2.11e-14 | 1 |
chondroblast | 8.11e-10 | 6 |
chondrocyte | 8.11e-10 | 6 |
adipocyte of breast | 3.56e-08 | 2 |
fibroblast of choroid plexus | 4.69e-08 | 2 |
GAG secreting cell | 7.87e-07 | 9 |
carbohydrate secreting cell | 7.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.96e-35 | 6 |
peritoneum | 1.96e-35 | 6 |
abdominal cavity | 1.96e-35 | 6 |
visceral peritoneum | 1.96e-35 | 6 |
cavity lining | 6.34e-18 | 12 |
serous membrane | 6.34e-18 | 12 |
breast | 1.18e-12 | 10 |
chest | 1.47e-11 | 11 |
vascular plexus | 4.69e-08 | 2 |
ventricle of nervous system | 4.69e-08 | 2 |
choroid plexus | 4.69e-08 | 2 |
brain ventricle | 4.69e-08 | 2 |
ventricular system of brain | 4.69e-08 | 2 |
ventricular system of central nervous system | 4.69e-08 | 2 |
perirenal fat | 7.52e-08 | 2 |
subdivision of trunk | 8.00e-07 | 112 |