FFCP PHASE1:Hg19::chr12:11422801..11422812,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5544 | |EntrezGene=5544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9339 | |HGNC=9339 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-62bp_to_ENST00000279573_5end | |association_with_transcript=-62bp_to_ENST00000279573_5end | ||
|cluster_id=chr12:11422801..11422812,- | |||
|coexpression_cluster_id=C70 | |coexpression_cluster_id=C70 | ||
|description=CAGE_peak_4_at_PRB3_5end | |description=CAGE_peak_4_at_PRB3_5end | ||
|id=chr12:11422801..11422812,- | |id=chr12:11422801..11422812,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.46e-50;1!UBERON:0006965;7.14e-26;2!UBERON:0004872;2.18e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001831;1.46e-50;1!UBERON:0001567;1.46e-50;1!UBERON:0001044;8.35e-34;6!UBERON:0003293;8.35e-34;6!UBERON:0003294;8.35e-34;6!UBERON:0010047;8.35e-34;6!UBERON:0003408;8.35e-34;6!UBERON:0000167;8.35e-34;6!UBERON:0001829;4.32e-26;2!UBERON:0004089;4.32e-26;2!UBERON:0003127;5.56e-26;2!UBERON:0001041;3.41e-15;14!UBERON:0000161;1.72e-11;19!UBERON:0000166;1.72e-11;19!UBERON:0003126;2.03e-08;7!UBERON:0001005;2.03e-08;7!UBERON:0000165;3.92e-08;28!UBERON:0002365;3.57e-07;31!UBERON:0002330;3.57e-07;31 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001831!1.07e-23!1;UBERON:0001567!1.07e-23!1;UBERON:0008801!1.07e-23!1;UBERON:0001044!7.79e-16!6;UBERON:0003293!7.79e-16!6;UBERON:0003294!7.79e-16!6;UBERON:0010047!7.79e-16!6;UBERON:0000167!7.79e-16!6;UBERON:0001829!1.48e-12!2;UBERON:0004089!1.48e-12!2;UBERON:0003127!1.65e-12!2;UBERON:0000341!2.32e-12!2;UBERON:0007023!4.30e-12!115;UBERON:0000078!9.59e-12!18;UBERON:0000166!3.68e-10!21;UBERON:0003408!6.78e-10!10;UBERON:0001723!1.30e-08!3;UBERON:0001033!1.30e-08!3;UBERON:0010056!1.30e-08!3;UBERON:0001004!7.65e-08!72;UBERON:0000165!9.00e-08!28;UBERON:0000930!9.00e-08!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;1.46e-50;1!UBERON:0001567;1.46e-50;1!UBERON:0001044;8.35e-34;6!UBERON:0003293;8.35e-34;6!UBERON:0003294;8.35e-34;6!UBERON:0010047;8.35e-34;6!UBERON:0003408;8.35e-34;6!UBERON:0000167;8.35e-34;6!UBERON:0001829;4.32e-26;2!UBERON:0004089;4.32e-26;2!UBERON:0003127;5.56e-26;2!UBERON:0001041;3.41e-15;14!UBERON:0000161;1.72e-11;19!UBERON:0000166;1.72e-11;19!UBERON:0003126;2.03e-08;7!UBERON:0001005;2.03e-08;7!UBERON:0000165;3.92e-08;28!UBERON:0002365;3.57e-07;31!UBERON:0002330;3.57e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.46e-50,1;UBERON:0001567,1.46e-50,1;UBERON:0008801,1.46e-50,1;UBERON:0001044,8.35e-34,6;UBERON:0003293,8.35e-34,6;UBERON:0003294,8.35e-34,6;UBERON:0010047,8.35e-34,6;UBERON:0000167,8.35e-34,6;UBERON:0001829,4.32e-26,2;UBERON:0004089,4.32e-26,2;UBERON:0003127,5.56e-26,2;UBERON:0003408,8.54e-21,10;UBERON:0000166,4.53e-10,22;UBERON:0003126,2.03e-08,7;UBERON:0001005,2.03e-08,7;UBERON:0000165,6.91e-08,29;UBERON:0000930,6.91e-08,29;UBERON:0007023,8.86e-08,114;UBERON:0002365,1.92e-07,31;UBERON:0002330,1.92e-07,31;UBERON:0001004,6.64e-07,74 | |||
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|short_description=p4@PRB3 | |short_description=p4@PRB3 | ||
}} | }} |
Latest revision as of 13:28, 16 September 2015
Short description: | p4@PRB3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRB3_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -62bp_to_ENST00000279573_5end |
EntrezGene: | PRB3 |
HGNC: | 9339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@PRB3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.46e-50 | 1 |
cheek | 1.46e-50 | 1 |
parotid gland primordium | 1.46e-50 | 1 |
saliva-secreting gland | 8.35e-34 | 6 |
gland of oral region | 8.35e-34 | 6 |
gland of foregut | 8.35e-34 | 6 |
oral gland | 8.35e-34 | 6 |
oral cavity | 8.35e-34 | 6 |
major salivary gland | 4.32e-26 | 2 |
midface | 4.32e-26 | 2 |
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