FFCP PHASE1:Hg19::chr22:31003100..31003111,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6948 | |EntrezGene=6948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11653 | |HGNC=11653 | ||
|TSSclassifier=strong | |||
|UniProt=B5MBX2 | |UniProt=B5MBX2 | ||
|association_with_transcript=-27bp_to_ENST00000405742_5end | |association_with_transcript=-27bp_to_ENST00000405742_5end | ||
|cluster_id=chr22:31003100..31003111,+ | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_8_at_TCN2_5end | |description=CAGE_peak_8_at_TCN2_5end | ||
|id=chr22:31003100..31003111,+ | |id=chr22:31003100..31003111,+ | ||
|ontology_enrichment_celltype=CL:0002322;4.64e-15;5!CL:0002619;1.67e-10;3!CL:0000148;4.02e-10;10!CL:0000235;2.08e-08;6!CL:0000710;4.55e-08;20!CL:0002575;1.64e-07;2!CL:0000669;1.82e-07;4!CL:0002549;3.45e-07;2!CL:0000075;3.63e-07;27!CL:0000147;5.23e-07;14 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;4.64e-15;5!CL:0002619;1.67e-10;3!CL:0000148;4.02e-10;10!CL:0000235;2.08e-08;6!CL:0000710;4.55e-08;20!CL:0002575;1.64e-07;2!CL:0000669;1.82e-07;4!CL:0002549;3.45e-07;2!CL:0000075;3.63e-07;27!CL:0000147;5.23e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.61e-15,5;CL:0002619,1.69e-10,3;CL:0000148,2.77e-10,10;CL:0000541,2.77e-10,10;CL:0000235,2.62e-08,6;CL:0000710,3.38e-08,20;CL:0002575,1.66e-07,2;CL:0000669,1.94e-07,4;CL:0000075,2.80e-07,27;CL:0002549,3.64e-07,2;CL:0000147,4.05e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003135;2.39e-11;11!UBERON:0005904;4.43e-11;4!UBERON:0006876;7.13e-09;11!UBERON:0006947;9.97e-09;3!UBERON:0004054;9.97e-09;3!UBERON:0005629;3.45e-07;2!UBERON:0005358;3.45e-07;2!UBERON:0001886;3.45e-07;2!UBERON:0004086;3.45e-07;2!UBERON:0005282;3.45e-07;2!UBERON:0005281;3.45e-07;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.55e-16!659;UBERON:0007023!5.81e-14!115;UBERON:0000922!2.38e-12!612;UBERON:0000467!1.24e-11!625;UBERON:0001017!1.40e-11!82;UBERON:0000480!1.79e-11!626;UBERON:0005743!7.60e-11!86;UBERON:0002616!1.14e-10!59;UBERON:0000073!1.30e-10!94;UBERON:0001016!1.30e-10!94;UBERON:0002050!5.65e-10!605;UBERON:0005423!5.65e-10!605;UBERON:0000923!8.98e-10!604;UBERON:0005291!8.98e-10!604;UBERON:0006598!8.98e-10!604;UBERON:0002532!8.98e-10!604;UBERON:0001049!1.88e-09!57;UBERON:0005068!1.88e-09!57;UBERON:0006241!1.88e-09!57;UBERON:0007135!1.88e-09!57;UBERON:0000062!2.48e-09!511;UBERON:0000955!4.42e-09!69;UBERON:0006238!4.42e-09!69;UBERON:0003075!8.99e-09!86;UBERON:0007284!8.99e-09!86;UBERON:0000477!1.52e-08!286;UBERON:0002346!4.67e-08!90;UBERON:0000153!6.03e-07!129;UBERON:0007811!6.03e-07!129;UBERON:0000033!8.29e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.39e-11;11!UBERON:0005904;4.43e-11;4!UBERON:0006876;7.13e-09;11!UBERON:0006947;9.97e-09;3!UBERON:0004054;9.97e-09;3!UBERON:0005629;3.45e-07;2!UBERON:0005358;3.45e-07;2!UBERON:0001886;3.45e-07;2!UBERON:0004086;3.45e-07;2!UBERON:0005282;3.45e-07;2!UBERON:0005281;3.45e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,9.94e-12,11;UBERON:0005904,1.10e-11,4;UBERON:0006947,3.09e-09,3;UBERON:0004054,3.09e-09,3;UBERON:0006876,6.91e-09,11;UBERON:0005629,3.64e-07,2;UBERON:0005358,3.64e-07,2;UBERON:0001886,3.64e-07,2;UBERON:0004086,3.64e-07,2;UBERON:0005282,3.64e-07,2;UBERON:0005281,3.64e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0.783556884599516,0,0,0.218441372130172,0.527533956456907,0.990130823680373,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,1.72369481307503,1.02000345622126,0.940364164434263,1.43117993565528,0.547497700291537,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,15.6740831967947,26.2353869475373,18.0302897343931,0.290796477559129,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0.575384784644301,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.564727018627814,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0.398927315243264,0.852449501065388,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0.211255286311942,0.425208599930087,0.209658645508376,0,0.300353785683013,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,1.60709189178915,0.886917589850256,2.28370442802128,0.327447688744282,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,0,1.10047216776027,0.626984899610432,1.03366703667732,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0.367663080345869,1.62028389576352,0.625098097988558,0,0.225222960966644,0,1.89853131913626,0.549605231791222,0,0,0,0,0.379891534993739,0,0.573673241497627,0,0,0,0.49333509683432,0.622422070799533,0.942974704487816,0.980771418680752,4.69208025699287,2.30470369792,0.468642863667593,0,0,0.448346041655403,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0.340296549480063,0,0,0.211931901159562,0,0,0,0,0.506328996723799,0,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,3.17131635936948,1.45782745153634,2.32387885739037,3.31715376049185,4.28945446488568,4.37972830890996,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,3.59384255422738,0.587043471179108,0.866198686566443,1.38895653772983,0.761016608938393,0,0,6.15542515218493,0.702012795417713,1.18904929830983,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.264145302039678,0,0,0,0.952468414382536,1.90994212779139,0,0,0.925447434329912,1.50171528921959,3.14409075893636,1.90622843387113,2.61576041299968,0.1466765716419,0.129271715757778,0,0.845302752556,0.26593811658487,0,0.514414748524284,2.83698264046557,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0,8.51366464488333,8.03611346291402,0,0.239624855491583,0,0,0.144781306667579,0.821905290201534,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0.837581326671744,0.637938751653163,0,0,0,0.858840442033979,3.00102312635806,1.08506009479894,0.207970861530807,0,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0,0.434418072340414,16.2514960694075,9.60801586670397,0,0.431428401637234,0,0,3.32870879020994,0.907170879989041,0,0.306923946576125,0.561320188866147,0.512556597022804,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0.902399225814824,0.0770153371044148,0,0,0.211103257785751,0,0.850468526382578,0,0,1.35473218771926,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.721287081534056,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.37064843820784,0,1.86079184679834,0.632758849437452,0,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0,0.202182481573316,0,0,0.48763373908959,0.731140468893853,0,0,0,0,0,0,0,1.73632660280006,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,1.26664581178598,0.987884678879706,0.379473173765715,1.04980416073495,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0.47748896947538,0.296964680832639,0.614321404198464,0,0.281338832821026,0,0,0,0.597743964753209,0.276283915531148,0,1.43176155503017,0,0,0.269605053441981,0,0,0.197286811273867,0,0,0,0.834912883456661,0,0,0.174919999992391,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.552896299656123,0.886642856860642,1.09692698576986,0,0,0.461701551022782,0,0,0.0897576444097721,0,0.638002319463839,0,0.533034776018635,0,0,0,0.225595660617181,0,0,0,0,0.843992258112108,0,0.141353071433941,0,0,0.442287822516696,0,0,0,0,0.876214728748802,0.802577647298789,1.1713222286267,0,0,0,1.57833761139756,0,0,1.64285107034069,0,0.103688191397247,0,0,0,0,0,0,1.21491816834592,0,0.0870592065804026,1.9219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| ||
|short_description=p8@TCN2 | |short_description=p8@TCN2 | ||
}} | }} |
Latest revision as of 18:37, 19 September 2015
Short description: | p8@TCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TCN2_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -27bp_to_ENST00000405742_5end |
EntrezGene: | TCN2 |
HGNC: | 11653 |
UniProt: | B5MBX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.61e-15 | 5 |
adult endothelial progenitor cell | 1.69e-10 | 3 |
melanocyte | 2.77e-10 | 10 |
melanoblast | 2.77e-10 | 10 |
macrophage | 2.62e-08 | 6 |
neurecto-epithelial cell | 3.38e-08 | 20 |
central nervous system pericyte | 1.66e-07 | 2 |
pericyte cell | 1.94e-07 | 4 |
columnar/cuboidal epithelial cell | 2.80e-07 | 27 |
fibroblast of choroid plexus | 3.64e-07 | 2 |
pigment cell | 4.05e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 9.94e-12 | 11 |
duct of male reproductive system | 1.10e-11 | 4 |
male genital duct | 3.09e-09 | 3 |
internal male genitalia | 3.09e-09 | 3 |
vasculature of organ | 6.91e-09 | 11 |
vascular plexus | 3.64e-07 | 2 |
ventricle of nervous system | 3.64e-07 | 2 |
choroid plexus | 3.64e-07 | 2 |
brain ventricle | 3.64e-07 | 2 |
ventricular system of brain | 3.64e-07 | 2 |
ventricular system of central nervous system | 3.64e-07 | 2 |