FFCP PHASE1:Hg19::chr1:151028753..151028762,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:151028753..151028762,-
|short_description=p6@CDC42SE1
|description=CAGE_peak_6_at_CDC42SE1_5end
|association_with_transcript=-369bp_to_BC012796_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56882 | |EntrezGene=56882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=17719 | |HGNC=17719 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRR8 | |UniProt=Q9NRR8 | ||
|association_with_transcript=-369bp_to_BC012796_5end | |||
|cluster_id=chr1:151028753..151028762,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_CDC42SE1_5end | |||
|id=chr1:151028753..151028762,- | |||
|ontology_enrichment_celltype=CL:0000791!2.03e-35!18;CL:0000789!2.03e-35!18;CL:0002420!2.03e-35!18;CL:0002419!2.03e-35!18;CL:0000790!2.03e-35!18;CL:0000838!4.11e-30!52;CL:0000542!2.14e-29!53;CL:0000051!2.14e-29!53;CL:0000625!3.39e-28!11;CL:0000084!3.43e-27!25;CL:0000827!3.43e-27!25;CL:0000738!3.13e-22!140;CL:0002087!6.70e-21!119;CL:0000037!5.07e-17!172;CL:0000566!5.07e-17!172;CL:0002031!5.29e-17!124;CL:0000988!1.78e-15!182;CL:0002032!5.45e-15!165;CL:0000837!5.45e-15!165;CL:0000624!1.85e-11!6;CL:0000898!2.32e-09!3;CL:0000623!1.01e-08!3;CL:0000825!1.01e-08!3;CL:0000842!2.20e-08!3;CL:0000236!4.39e-08!14;CL:0000767!1.06e-07!3;CL:0000815!7.66e-07!2;CL:0000792!7.66e-07!2;CL:0002677!7.66e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.55e-34;18!CL:0000789;2.55e-34;18!CL:0002419;2.55e-34;18!CL:0000625;1.36e-25;11!CL:0000084;5.51e-24;25!CL:0000898;7.85e-15;3!CL:0000623;1.27e-13;3!CL:0000542;2.87e-13;53!CL:0000624;1.47e-12;6!CL:0000815;1.56e-10;2!CL:0000792;1.56e-10;2!CL:0002677;1.56e-10;2!CL:0000226;6.35e-07;3!CL:0000842;6.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.55e-34,18;CL:0000789,1.55e-34,18;CL:0002420,1.55e-34,18;CL:0002419,1.55e-34,18;CL:0000790,1.55e-34,18;CL:0000625,8.82e-26,11;CL:0000084,3.88e-24,25;CL:0000827,3.88e-24,25;CL:0000838,4.70e-24,52;CL:0000542,1.61e-23,53;CL:0000051,1.61e-23,53;CL:0000898,9.49e-15,3;CL:0000623,1.14e-13,3;CL:0000825,1.14e-13,3;CL:0000624,1.33e-12,6;CL:0002087,6.75e-11,115;CL:0000815,1.68e-10,2;CL:0000792,1.68e-10,2;CL:0002677,1.68e-10,2;CL:0000738,1.33e-09,136;CL:0002031,5.20e-08,120;CL:0000037,6.31e-07,168;CL:0000226,9.08e-07,3;CL:0000842,9.08e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.55e-34;18!CL:0000051;2.87e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.00e-19!15;UBERON:0000179!5.00e-19!15;UBERON:0000463!5.00e-19!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.19e-18;15!UBERON:0000179;9.19e-18;15!UBERON:0000463;9.19e-18;15!UBERON:0002390;1.71e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.68e-17,15;UBERON:0000179,1.68e-17,15;UBERON:0000463,1.68e-17,15 | |||
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| ||
|short_description=p6@CDC42SE1 | |||
}} | }} |
Latest revision as of 23:54, 16 September 2015
Short description: | p6@CDC42SE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDC42SE1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -369bp_to_BC012796_5end |
EntrezGene: | CDC42SE1 |
HGNC: | 17719 |
UniProt: | Q9NRR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.55e-34 | 18 |
alpha-beta T cell | 1.55e-34 | 18 |
immature T cell | 1.55e-34 | 18 |
mature T cell | 1.55e-34 | 18 |
immature alpha-beta T cell | 1.55e-34 | 18 |
CD8-positive, alpha-beta T cell | 8.82e-26 | 11 |
T cell | 3.88e-24 | 25 |
pro-T cell | 3.88e-24 | 25 |
lymphoid lineage restricted progenitor cell | 4.70e-24 | 52 |
lymphocyte | 1.61e-23 | 53 |
common lymphoid progenitor | 1.61e-23 | 53 |
naive T cell | 9.49e-15 | 3 |
natural killer cell | 1.14e-13 | 3 |
pro-NK cell | 1.14e-13 | 3 |
CD4-positive, alpha-beta T cell | 1.33e-12 | 6 |
nongranular leukocyte | 6.75e-11 | 115 |
regulatory T cell | 1.68e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.68e-10 | 2 |
naive regulatory T cell | 1.68e-10 | 2 |
leukocyte | 1.33e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 5.20e-08 | 120 |
hematopoietic stem cell | 6.31e-07 | 168 |
single nucleate cell | 9.08e-07 | 3 |
mononuclear cell | 9.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.68e-17 | 15 |
haemolymphatic fluid | 1.68e-17 | 15 |
organism substance | 1.68e-17 | 15 |