FFCP PHASE1:Hg19::chr11:134122877..134122892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29087 | |EntrezGene=29087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29560 | |HGNC=29560 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P016 | |UniProt=Q9P016 | ||
|association_with_transcript=345bp_to_ENST00000341541_5end | |association_with_transcript=345bp_to_ENST00000341541_5end | ||
|cluster_id=chr11:134122877..134122892,- | |||
|description=CAGE_peak_3_at_THYN1_5end | |description=CAGE_peak_3_at_THYN1_5end | ||
|id=chr11:134122877..134122892,- | |id=chr11:134122877..134122892,- | ||
|ontology_enrichment_celltype=CL:0002591;2.97e-19;1!CL:0002570;4.52e-10;8!CL:0002521;2.71e-07;3!CL:0002567;2.71e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002591;2.97e-19;1!CL:0002570;4.52e-10;8!CL:0002521;2.71e-07;3!CL:0002567;2.71e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.69e-19,1;CL:0002570,4.42e-10,8;CL:0002521,2.19e-07,3;CL:0002567,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.97e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002084;2.97e-19;1!UBERON:0002082;2.97e-19;1!UBERON:0001013;2.73e-12;14!UBERON:0000078;2.60e-10;2!UBERON:0002012;2.60e-10;2!UBERON:0008886;2.60e-10;2!UBERON:0004151;2.71e-07;3!UBERON:0002190;2.71e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-14!115;UBERON:0001869!3.81e-10!32;UBERON:0002619!6.30e-10!22;UBERON:0001893!2.70e-09!34;UBERON:0002791!1.23e-08!33;UBERON:0000956!2.28e-08!25;UBERON:0000203!2.28e-08!25;UBERON:0002020!2.89e-08!34;UBERON:0003528!2.89e-08!34;UBERON:0001950!5.82e-08!20;UBERON:0002346!5.94e-08!90;UBERON:0002780!6.97e-08!41;UBERON:0001890!6.97e-08!41;UBERON:0006240!6.97e-08!41;UBERON:0003080!1.37e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.97e-19;1!UBERON:0002082;2.97e-19;1!UBERON:0001013;2.73e-12;14!UBERON:0000078;2.60e-10;2!UBERON:0002012;2.60e-10;2!UBERON:0008886;2.60e-10;2!UBERON:0004151;2.71e-07;3!UBERON:0002190;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,3.25e-19,1;UBERON:0002082,3.25e-19,1;UBERON:0010226,3.25e-19,1;UBERON:0001013,2.34e-12,14;UBERON:0000078,3.27e-10,2;UBERON:0007497,3.27e-10,2;UBERON:0003643,3.27e-10,2;UBERON:0003504,3.27e-10,2;UBERON:0003469,3.27e-10,2;UBERON:0003496,3.27e-10,2;UBERON:0002012,3.27e-10,2;UBERON:0008886,3.27e-10,2;UBERON:0007303,3.27e-10,2;UBERON:0002061,3.27e-10,2;UBERON:0005432,3.27e-10,2;UBERON:0004363,3.27e-10,2;UBERON:0002190,2.19e-07,3;UBERON:0000948,2.74e-07,24;UBERON:0005498,2.74e-07,24;UBERON:0004140,2.74e-07,24;UBERON:0009881,2.74e-07,24;UBERON:0004141,2.74e-07,24;UBERON:0003084,2.74e-07,24;UBERON:0007005,2.74e-07,24;UBERON:0004139,2.74e-07,24;UBERON:0004291,2.74e-07,24;UBERON:0004151,2.79e-07,3;UBERON:0004145,3.16e-07,3 | |||
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| ||
|short_description=p3@THYN1 | |short_description=p3@THYN1 | ||
}} | }} |
Latest revision as of 20:30, 16 September 2015
Short description: | p3@THYN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_THYN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 345bp_to_ENST00000341541_5end |
EntrezGene: | THYN1 |
HGNC: | 29560 |
UniProt: | Q9P016 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.69e-19 | 1 |
mesenchymal stem cell of adipose | 4.42e-10 | 8 |
subcutaneous fat cell | 2.19e-07 | 3 |
light melanocyte | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 3.25e-19 | 1 |
cardiac ventricle | 3.25e-19 | 1 |
future cardiac ventricle | 3.25e-19 | 1 |
adipose tissue | 2.34e-12 | 14 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.27e-10 | 2 |
developing epithelial placode | 3.27e-10 | 2 |
respiratory system arterial blood vessel | 3.27e-10 | 2 |
respiratory system blood vessel | 3.27e-10 | 2 |
respiratory system artery | 3.27e-10 | 2 |
head blood vessel | 3.27e-10 | 2 |
pulmonary artery | 3.27e-10 | 2 |
pulmonary vascular system | 3.27e-10 | 2 |
pharyngeal vasculature | 3.27e-10 | 2 |
truncus arteriosus | 3.27e-10 | 2 |
aortic sac | 3.27e-10 | 2 |
pharyngeal arch artery | 3.27e-10 | 2 |
subcutaneous adipose tissue | 2.19e-07 | 3 |
heart | 2.74e-07 | 24 |
primitive heart tube | 2.74e-07 | 24 |
primary heart field | 2.74e-07 | 24 |
anterior lateral plate mesoderm | 2.74e-07 | 24 |
heart tube | 2.74e-07 | 24 |
heart primordium | 2.74e-07 | 24 |
cardiac mesoderm | 2.74e-07 | 24 |
cardiogenic plate | 2.74e-07 | 24 |
heart rudiment | 2.74e-07 | 24 |
cardiac chamber | 2.79e-07 | 3 |
outflow tract | 3.16e-07 | 3 |