FFCP PHASE1:Hg19::chr1:152596275..152596277,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:152596275..152596277,-
|short_description=p@chr1:152596275..152596277,-
|description=CAGE_peak_at_chr1:152596275..152596277,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:152596275..152596277,- | |||
|coexpression_cluster_id=C1139 | |||
|description=CAGE_peak_at_chr1:152596275..152596277,- | |||
|id=chr1:152596275..152596277,- | |||
|ontology_enrichment_celltype=CL:0002159!2.80e-13!13;CL:0000622!3.78e-10!5;CL:0002621!5.70e-10!3;CL:0000362!4.87e-09!8;CL:0000154!1.89e-08!6;CL:0000515!3.81e-08!4;CL:0000188!7.01e-08!9;CL:0000240!1.19e-07!6;CL:0000311!1.19e-07!6;CL:0000079!1.19e-07!6;CL:0000237!1.19e-07!6;CL:0000036!1.19e-07!6;CL:0000357!1.19e-07!6;CL:0000114!1.19e-07!6;CL:0000317!2.91e-07!2;CL:1000448!2.91e-07!2;CL:0002308!2.91e-07!2;CL:0002140!2.91e-07!2;CL:0002583!4.19e-07!2;CL:0000575!4.45e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000056;1.09e-23;4!CL:0000515;9.38e-15;3!CL:0000680;8.38e-14;7!CL:0000228;1.60e-11;1!CL:0002372;1.60e-11;1!CL:0002159;6.05e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.09e-23,4;CL:0000228,1.60e-11,1;CL:0002372,1.60e-11,1;CL:0002159,6.43e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000515;1.09e-23;4 | |||
|ontology_enrichment_disease=DOID:2394!7.44e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5662;4.44e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,3.28e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.87e-13!95;UBERON:0000014!1.13e-11!4;UBERON:0000166!1.94e-10!21;UBERON:0001949!5.70e-10!3;UBERON:0000165!5.11e-09!28;UBERON:0000930!5.11e-09!28;UBERON:0002419!2.91e-07!2;UBERON:0007771!2.91e-07!2;UBERON:0003297!2.91e-07!2;UBERON:0001821!2.91e-07!2;UBERON:0003487!2.91e-07!2;UBERON:0001820!2.91e-07!2;UBERON:0005089!2.91e-07!2;UBERON:0005088!2.91e-07!2;UBERON:0002119!4.50e-07!4;UBERON:0004531!4.50e-07!4;UBERON:0001003!4.56e-07!14;UBERON:0007376!4.56e-07!14;UBERON:0007383!4.56e-07!14;UBERON:0000161!7.39e-07!35;UBERON:0002199!9.65e-07!45;UBERON:0002416!9.65e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;9.71e-15;3!UBERON:0001033;9.71e-15;3!UBERON:0002372;2.07e-11;1!UBERON:0001961;2.07e-11;1!UBERON:0001744;2.07e-11;1!UBERON:0001042;2.07e-11;1!UBERON:0001735;2.07e-11;1!UBERON:0005795;2.82e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.39e-15,3;UBERON:0001033,9.39e-15,3;UBERON:0010056,9.39e-15,3;UBERON:0002372,1.78e-11,1;UBERON:0001961,1.78e-11,1;UBERON:0001744,1.78e-11,1;UBERON:0001735,1.78e-11,1;UBERON:0001042,8.24e-10,10;UBERON:0009145,8.24e-10,10;UBERON:0006562,5.79e-09,11;UBERON:0000166,1.28e-07,22 | |||
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| ||
|short_description=p@chr1:152596275..152596277,- | |||
}} | }} |
Latest revision as of 21:35, 27 July 2015
Short description: | p@chr1:152596275..152596277, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152596275..152596277, - |
Coexpression cluster: | C1139_Myoblast_mesenchymal_tongue_Preadipocyte_Astrocyte_nasal_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.09e-23 | 4 |
multinucleate cell | 1.60e-11 | 1 |
myotube | 1.60e-11 | 1 |
general ecto-epithelial cell | 6.43e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
tongue | 9.39e-15 | 3 |
gustatory system | 9.39e-15 | 3 |
future tongue | 9.39e-15 | 3 |
tonsil | 1.78e-11 | 1 |
mucosa-associated lymphoid tissue | 1.78e-11 | 1 |
lymphoid tissue | 1.78e-11 | 1 |
tonsillar ring | 1.78e-11 | 1 |
chordate pharynx | 8.24e-10 | 10 |
pharyngeal region of foregut | 8.24e-10 | 10 |
pharynx | 5.79e-09 | 11 |
oral opening | 1.28e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 3.28e-11 | 1 |