FFCP PHASE1:Hg19::chr1:154942454..154942470,-: Difference between revisions
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|id=chr1:154942454..154942470,-
|short_description=p@chr1:154942454..154942470,-
|description=CAGE_peak_at_chr1:154942454..154942470,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:154942454..154942470,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr1:154942454..154942470,- | |||
|id=chr1:154942454..154942470,- | |||
|ontology_enrichment_celltype=CL:0005020!1.90e-07!6;CL:0002138!1.90e-07!6;CL:0005022!1.90e-07!6;CL:0002139!2.52e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.47e-33;3!CL:0000067;1.47e-33;3!CL:0005012;1.47e-33;3!CL:0002304;1.47e-33;3!CL:0002138;2.50e-17;6!CL:0002568;2.19e-12;1!CL:0000710;4.57e-09;20!CL:0002600;8.05e-07;2!CL:0000075;9.27e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.06e-33,3;CL:0000067,1.06e-33,3;CL:0005012,1.06e-33,3;CL:0002304,1.06e-33,3;CL:0005020,1.70e-17,6;CL:0002138,1.70e-17,6;CL:0005022,1.70e-17,6;CL:0002568,3.45e-12,1;CL:0000710,3.78e-09,20;CL:0002600,8.06e-07,2;CL:0000075,8.07e-07,27 | |||
|ontology_enrichment_development_v019=CL:0005022;2.50e-17;6!UBERON:0006965;8.05e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.01e-13;1!DOID:4549;7.01e-13;1!DOID:5861;7.01e-13;1!DOID:6496;7.01e-13;1!DOID:4074;8.05e-07;2!DOID:4905;8.05e-07;2!DOID:3498;8.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.03e-13,1;DOID:4549,7.03e-13,1;DOID:5861,7.03e-13,1;DOID:6496,7.03e-13,1;DOID:4074,6.07e-07,2;DOID:4905,6.07e-07,2;DOID:3498,6.07e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001473!4.20e-07!8;UBERON:0004536!4.20e-07!8;UBERON:0006558!4.20e-07!8;UBERON:0000119!6.36e-07!312;UBERON:0002465!6.67e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.47e-33;3!UBERON:0001775;1.47e-33;3!UBERON:0000488;2.33e-25;4!UBERON:0002203;3.90e-17;6!UBERON:0001768;3.90e-17;6!UBERON:0002200;3.90e-17;6!UBERON:0001473;3.77e-13;8!UBERON:0004536;3.77e-13;8!UBERON:0006558;3.77e-13;8!UBERON:0002465;1.24e-10;10!UBERON:0007625;1.30e-09;11!UBERON:0006876;1.30e-09;11!UBERON:0001801;1.16e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.06e-33,3;UBERON:0001775,1.06e-33,3;UBERON:0000488,1.82e-25,4;UBERON:0002203,3.31e-17,6;UBERON:0001768,3.31e-17,6;UBERON:0002200,3.31e-17,6;UBERON:0001473,2.83e-13,8;UBERON:0004536,2.83e-13,8;UBERON:0006558,2.83e-13,8;UBERON:0002465,9.87e-11,10;UBERON:0007625,1.19e-09,11;UBERON:0006876,1.19e-09,11;UBERON:0001801,1.09e-07,14 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,1.02000345622126,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,1.13441780596881,1.99556457716308,1.14185221401064,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.838998872419812,0,0,0.258416759169329,0.71153252537342,1.67360306382335,0,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0.933633106199299,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0,0,0.325808305310325,0,0,0.811512834825538,0.352226082707465,1.58803092537181,2.31492756288305,0.570762456703795,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0.300343057843917,0.857479297891735,0.336393253036082,0,0.07333828582095,1.03417372606222,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.36807447515742,0,0,0.831883446123229,0.356857977594324,0,0.35142424497814,0.601892199455438,0,0,0,0,0.0868836144680828,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0.953150969619124,0.255897791311334,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,1.15755106853338,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0,0.234264445725339,0,0,1.69946265673865,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.52418000472609,0.687944129886466,0,0,0,0.0969890164884194,11.649808723278,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0.745515213392595,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0.209818352539992,0.105600336519406,0,0,0,0,0.5085370753095,3.25799761052228,0.864221491201268,0.653174720218818,0,0.246277562248017,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0.138348634936231,0,0.151649117541648,0.570930667089935,0,0,0,0,0.233713309847224,0,0.757612021100357,0.50313580350515,0,0.228840068396924,0.604923695052956,0.15543720058278,0.443565449968902,0,0.899606224327209,0.155262956876259,0,0.265841714557995,0.521745061811734,0.300515217994437,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0.175871244359621,0,0,0.336283722218824,0.606965604236632,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.78624198594322,0,0.116241425368125,0,0,0.62164849248911,0,0,0,0.828324005113957,0.681707238073262,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.077174158107944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| 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| ||
|short_description=p@chr1:154942454..154942470,- | |||
}} | }} |
Latest revision as of 22:07, 27 July 2015
Short description: | p@chr1:154942454..154942470, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:154942454..154942470, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.06e-33 | 3 |
ciliated epithelial cell | 1.06e-33 | 3 |
multi-ciliated epithelial cell | 1.06e-33 | 3 |
non-pigmented ciliary epithelial cell | 1.06e-33 | 3 |
lymphangioblast | 1.70e-17 | 6 |
endothelial cell of lymphatic vessel | 1.70e-17 | 6 |
vascular lymphangioblast | 1.70e-17 | 6 |
mesenchymal stem cell of Wharton's jelly | 3.45e-12 | 1 |
neurecto-epithelial cell | 3.78e-09 | 20 |
smooth muscle cell of trachea | 8.06e-07 | 2 |
columnar/cuboidal epithelial cell | 8.07e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.06e-33 | 3 |
ciliary body | 1.06e-33 | 3 |
atypical epithelium | 1.82e-25 | 4 |
vasculature of eye | 3.31e-17 | 6 |
uvea | 3.31e-17 | 6 |
vasculature of head | 3.31e-17 | 6 |
lymphatic vessel | 2.83e-13 | 8 |
lymph vasculature | 2.83e-13 | 8 |
lymphatic part of lymphoid system | 2.83e-13 | 8 |
lymphoid system | 9.87e-11 | 10 |
pigment epithelium of eye | 1.19e-09 | 11 |
vasculature of organ | 1.19e-09 | 11 |
anterior segment of eyeball | 1.09e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.03e-13 | 1 |
extraosseous chondrosarcoma | 7.03e-13 | 1 |
myxoid chondrosarcoma | 7.03e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 7.03e-13 | 1 |
pancreas adenocarcinoma | 6.07e-07 | 2 |
pancreatic carcinoma | 6.07e-07 | 2 |
pancreatic ductal adenocarcinoma | 6.07e-07 | 2 |