FFCP PHASE1:Hg19::chr1:198289252..198289266,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:198289252..198289266,+
|short_description=p11@NEK7
|description=CAGE_peak_11_at_NEK7_5end
|association_with_transcript=182bp_to_BC043003_5end
|EntrezGene=...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140609 | |EntrezGene=140609 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13386 | |HGNC=13386 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=182bp_to_BC043003_5end | |||
|cluster_id=chr1:198289252..198289266,+ | |||
|description=CAGE_peak_11_at_NEK7_5end | |||
|id=chr1:198289252..198289266,+ | |||
|ontology_enrichment_celltype=CL:0000077!3.04e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.73e-10;3!CL:0000135;3.57e-10;3!CL:0000388;3.57e-10;3!CL:0002557;2.98e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.78e-10,3;CL:0000388,1.78e-10,3;CL:0002579,3.12e-10,3;CL:0000057,4.97e-09,76;CL:0002557,2.50e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.98e-08;1!DOID:3369;2.98e-08;1!DOID:4235;2.98e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.22e-08,1;DOID:4235,1.88e-08,1;DOID:3369,2.17e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.21e-11;6!UBERON:0002358;2.21e-11;6!UBERON:0003684;2.21e-11;6!UBERON:0001178;2.21e-11;6!UBERON:0007846;3.57e-10;3!UBERON:0000043;3.57e-10;3!UBERON:0007845;3.57e-10;3!UBERON:0004457;9.70e-08;9!UBERON:0000042;9.70e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.49e-11,6;UBERON:0002358,3.49e-11,6;UBERON:0003684,3.49e-11,6;UBERON:0001178,3.49e-11,6;UBERON:0007846,1.78e-10,3;UBERON:0000043,1.78e-10,3;UBERON:0007845,1.78e-10,3 | |||
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| ||
|short_description=p11@NEK7 | |||
}} | }} |
Latest revision as of 14:08, 19 September 2015
Short description: | p11@NEK7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_NEK7_5end |
Coexpression cluster: | NA |
Association with transcript: | 182bp_to_BC043003_5end |
EntrezGene: | NEK7 |
HGNC: | 13386 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.78e-10 | 3 |
tendon cell | 1.78e-10 | 3 |
omentum preadipocyte | 3.12e-10 | 3 |
fibroblast | 4.97e-09 | 76 |
fibroblast of pulmonary artery | 2.50e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.49e-11 | 6 |
peritoneum | 3.49e-11 | 6 |
abdominal cavity | 3.49e-11 | 6 |
visceral peritoneum | 3.49e-11 | 6 |
dense regular connective tissue | 1.78e-10 | 3 |
tendon | 1.78e-10 | 3 |
regular connective tissue | 1.78e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.22e-08 | 1 |
spindle cell sarcoma | 1.88e-08 | 1 |
peripheral primitive neuroectodermal tumor | 2.17e-08 | 1 |