FFCP PHASE1:Hg19::chr4:1165811..1165842,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=243bp_to_ENST00000504909_5end | |association_with_transcript=243bp_to_ENST00000504909_5end | ||
|cluster_id=chr4:1165811..1165842,- | |||
|coexpression_cluster_id=C574 | |coexpression_cluster_id=C574 | ||
|description=CAGE_peak_10_at_SPON2_5end | |description=CAGE_peak_10_at_SPON2_5end | ||
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|ontology_enrichment_celltype=CL:0000136!1.52e-12!15;CL:0002334!2.70e-10!12;CL:0000048!5.21e-09!430;CL:0000723!6.83e-09!436;CL:0000034!2.91e-08!444;CL:0000055!5.52e-07!180;CL:0000057!6.59e-07!75 | |ontology_enrichment_celltype=CL:0000136!1.52e-12!15;CL:0002334!2.70e-10!12;CL:0000048!5.21e-09!430;CL:0000723!6.83e-09!436;CL:0000034!2.91e-08!444;CL:0000055!5.52e-07!180;CL:0000057!6.59e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.70e-18;13!CL:0002615;6.47e-13;3!CL:0002622;8.03e-13;3!CL:0002521;1.68e-12;3!CL:0002504;2.83e-12;3!CL:1000279;2.83e-12;3!CL:1000280;2.83e-12;3!CL:0002561;1.92e-08;2!CL:0002617;1.92e-08;2!CL:0002598;1.92e-08;2!CL:0000134;1.28e-07;55!CL:0002559;2.35e-07;5!CL:0002334;2.89e-07;12!CL:0000048;5.62e-07;58 | |ontology_enrichment_celltype_v019=CL:0000136;3.70e-18;13!CL:0002615;6.47e-13;3!CL:0002622;8.03e-13;3!CL:0002521;1.68e-12;3!CL:0002504;2.83e-12;3!CL:1000279;2.83e-12;3!CL:1000280;2.83e-12;3!CL:0002561;1.92e-08;2!CL:0002617;1.92e-08;2!CL:0002598;1.92e-08;2!CL:0000134;1.28e-07;55!CL:0002559;2.35e-07;5!CL:0002334;2.89e-07;12!CL:0000048;5.62e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.76e-24,15;CL:0002615,8.06e-13,3;CL:0002622,9.81e-13,3;CL:0002504,1.62e-12,3;CL:1000279,1.62e-12,3;CL:1000280,1.62e-12,3;CL:0002521,2.21e-12,3;CL:0000048,5.19e-11,427;CL:0000723,1.03e-10,433;CL:0000034,2.51e-10,441;CL:0002617,1.05e-08,2;CL:0002561,1.37e-08,2;CL:0002598,3.51e-08,2;CL:0002559,1.75e-07,5;CL:0002334,2.19e-07,12;CL:0000134,3.04e-07,354;CL:0002320,6.13e-07,361;CL:0000192,6.15e-07,43;CL:0000514,6.15e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!3.54e-08!14 | |ontology_enrichment_disease=DOID:2394!3.54e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.39e-09!6;UBERON:0002358!2.39e-09!6;UBERON:0003684!2.39e-09!6;UBERON:0001178!2.39e-09!6;UBERON:0004457!4.59e-08!12;UBERON:0000042!4.59e-08!12;UBERON:0002100!6.17e-08!216;UBERON:0002072!8.74e-08!5;UBERON:0001155!3.28e-07!9 | |ontology_enrichment_uberon=UBERON:0003688!2.39e-09!6;UBERON:0002358!2.39e-09!6;UBERON:0003684!2.39e-09!6;UBERON:0001178!2.39e-09!6;UBERON:0004457!4.59e-08!12;UBERON:0000042!4.59e-08!12;UBERON:0002100!6.17e-08!216;UBERON:0002072!8.74e-08!5;UBERON:0001155!3.28e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.82e-16;6!UBERON:0002358;4.82e-16;6!UBERON:0003684;4.82e-16;6!UBERON:0001178;4.82e-16;6!UBERON:0002072;1.40e-12;5!UBERON:0002190;1.68e-12;3!UBERON:0004457;1.36e-10;9!UBERON:0000042;1.36e-10;9!UBERON:0001013;4.12e-09;14!UBERON:0005933;1.92e-08;2!UBERON:0005942;1.92e-08;2!UBERON:0005932;1.92e-08;2!UBERON:0002073;2.35e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0003688;4.82e-16;6!UBERON:0002358;4.82e-16;6!UBERON:0003684;4.82e-16;6!UBERON:0001178;4.82e-16;6!UBERON:0002072;1.40e-12;5!UBERON:0002190;1.68e-12;3!UBERON:0004457;1.36e-10;9!UBERON:0000042;1.36e-10;9!UBERON:0001013;4.12e-09;14!UBERON:0005933;1.92e-08;2!UBERON:0005942;1.92e-08;2!UBERON:0005932;1.92e-08;2!UBERON:0002073;2.35e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.62e-16,6;UBERON:0002358,4.62e-16,6;UBERON:0003684,4.62e-16,6;UBERON:0001178,4.62e-16,6;UBERON:0002072,1.82e-12,5;UBERON:0002190,2.21e-12,3;UBERON:0001013,5.70e-09,14;UBERON:0005933,1.37e-08,2;UBERON:0005942,1.37e-08,2;UBERON:0005932,1.37e-08,2;UBERON:0004457,7.24e-08,12;UBERON:0000042,7.24e-08,12;UBERON:0002073,1.75e-07,5;UBERON:0005086,1.75e-07,5;UBERON:0004923,4.97e-07,66 | |||
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|short_description=p10@SPON2 | |short_description=p10@SPON2 | ||
}} | }} |
Latest revision as of 20:29, 24 September 2015
Short description: | p10@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | 243bp_to_ENST00000504909_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.76e-24 | 15 |
adipocyte of omentum tissue | 8.06e-13 | 3 |
prostate stromal cell | 9.81e-13 | 3 |
enteric smooth muscle cell | 1.62e-12 | 3 |
smooth muscle cell of large intestine | 1.62e-12 | 3 |
smooth muscle cell of colon | 1.62e-12 | 3 |
subcutaneous fat cell | 2.21e-12 | 3 |
multi fate stem cell | 5.19e-11 | 427 |
somatic stem cell | 1.03e-10 | 433 |
stem cell | 2.51e-10 | 441 |
adipocyte of breast | 1.05e-08 | 2 |
outer root sheath cell | 1.37e-08 | 2 |
bronchial smooth muscle cell | 3.51e-08 | 2 |
hair follicle cell | 1.75e-07 | 5 |
preadipocyte | 2.19e-07 | 12 |
mesenchymal cell | 3.04e-07 | 354 |
connective tissue cell | 6.13e-07 | 361 |
smooth muscle cell | 6.15e-07 | 43 |
smooth muscle myoblast | 6.15e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.62e-16 | 6 |
peritoneum | 4.62e-16 | 6 |
abdominal cavity | 4.62e-16 | 6 |
visceral peritoneum | 4.62e-16 | 6 |
hypodermis | 1.82e-12 | 5 |
subcutaneous adipose tissue | 2.21e-12 | 3 |
adipose tissue | 5.70e-09 | 14 |
hair root sheath | 1.37e-08 | 2 |
hair outer root sheath | 1.37e-08 | 2 |
bulb of hair follicle | 1.37e-08 | 2 |
cavity lining | 7.24e-08 | 12 |
serous membrane | 7.24e-08 | 12 |
hair follicle | 1.75e-07 | 5 |
hair follicle placode | 1.75e-07 | 5 |
organ component layer | 4.97e-07 | 66 |