FFCP PHASE1:Hg19::chr1:224983437..224983438,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:224983437..224983438,+
|short_description=p@chr1:224983437..224983438,+
|description=CAGE_peak_at_chr1:224983437..224983438,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:224983437..224983438,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr1:224983437..224983438,+ | |||
|id=chr1:224983437..224983438,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.43e-35!180;CL:0000057!5.43e-26!75;CL:0000680!2.93e-15!57;CL:0000056!2.93e-15!57;CL:0000355!2.93e-15!57;CL:0000048!4.61e-15!430;CL:0000183!6.44e-15!59;CL:0000723!3.25e-14!436;CL:0000187!3.69e-14!54;CL:0000034!1.78e-13!444;CL:0000192!7.12e-13!42;CL:0000514!7.12e-13!42;CL:0000393!1.74e-11!60;CL:0000211!1.74e-11!60;CL:0002620!2.79e-10!23;CL:0002371!4.10e-09!591;CL:0002334!8.29e-09!12;CL:0000359!4.15e-08!32;CL:0002320!8.33e-08!365;CL:0000144!9.56e-08!625 | |||
|ontology_enrichment_celltype_v019=CL:0000057;8.52e-10;73!CL:0000723;1.87e-09;61!CL:0002620;3.08e-09;23!CL:0000134;3.91e-09;55!CL:0000048;1.28e-08;58!CL:0002320;1.33e-08;188!CL:0002570;5.44e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.47e-25,76;CL:0000048,1.23e-12,427;CL:0000723,4.11e-12,433;CL:0000034,1.94e-11,441;CL:0002320,1.31e-10,361;CL:0002620,1.76e-09,23;CL:0000134,3.71e-09,354;CL:0000219,1.66e-07,386;CL:0002570,7.49e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.43e-08;5!DOID:450;2.43e-08;5!DOID:66;2.43e-08;5!DOID:423;2.43e-08;5!DOID:0080000;2.43e-08;5!DOID:11722;2.43e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.60e-08,5;DOID:450,1.60e-08,5;DOID:66,1.60e-08,5;DOID:423,1.60e-08,5;DOID:0080000,1.60e-08,5;DOID:11722,1.60e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.19e-20!83;UBERON:0002329!2.19e-20!83;UBERON:0003077!2.19e-20!83;UBERON:0003059!2.19e-20!83;UBERON:0007282!2.19e-20!83;UBERON:0009618!2.19e-20!83;UBERON:0007285!2.19e-20!83;UBERON:0004290!8.26e-18!70;UBERON:0001134!1.38e-16!61;UBERON:0002036!1.38e-16!61;UBERON:0003082!1.38e-16!61;UBERON:0002385!1.40e-15!63;UBERON:0001015!1.40e-15!63;UBERON:0000383!1.40e-15!63;UBERON:0000486!1.45e-13!82;UBERON:0005256!7.82e-11!143;UBERON:0002199!1.11e-08!45;UBERON:0002416!1.11e-08!45;UBERON:0000475!2.82e-08!365;UBERON:0002100!4.94e-08!216;UBERON:0002384!5.40e-08!375;UBERON:0003102!1.24e-07!95;UBERON:0002097!2.82e-07!40;UBERON:0001013!5.26e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.19e-08;14!UBERON:0002384;5.02e-08;198!UBERON:0002097;6.57e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.86e-10,371;UBERON:0002199,5.00e-09,46;UBERON:0002416,5.00e-09,46;UBERON:0002097,2.47e-08,41;UBERON:0001013,2.89e-08,14 | |||
|phase1_expression=1.2717486548939,1.49870366723688,0.704772020479856,0,4.46961094427288,3.48935409640147,10.1319951267324,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.123766352960047,1.65698687863958,0,0,0,0.487932798790507,0.492484232307152,1.83600622119828,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0.722878304769133,1.50401373190767,1.44846518960824,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.01304409331664,1.19168262731897,13.1944845544454,0.354668382198357,2.80338800071154,4.2699598291882,3.20667812942308,0,1.0776853765575,0,2.27036141467397,5.18558332031999,0,0,0,0.149448680551801,0.117434498643765,0,0.421352420106746,0.408308342509787,0,0.103325781175765,8.31602000097437,0.741800787835671,0,1.43723628363248,0,0.125118519871964,0.831192346452549,2.63386572528503,2.45190236639216,1.65261864797256,0.226864366320042,7.5343646989322,1.49490172172997,1.48352330811693,12.6038260355449,2.67936576019941,6.1833729610951,1.8611685633159,5.06328996723799,3.21542117031955,1.7670364197088,0.644349290496095,3.55621325001386,8.52023022039874,1.30977727695932,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,7.3504355692771,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0.231860809950154,3.40485213283883,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,1.74384027533312,0.22001485746285,0.904902010304444,0,2.535908257668,0.797814349754612,1.04007436911366,0.257207374262142,2.83698264046557,0.266422179016099,1.57275793023962,5.42621605391443,0,0.977208552881205,1.77695974371273,1.58390374586686,0,0,0,0,0,0,2.15662369942424,9.18895486672911,0,0.434343920002738,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,1.08506009479894,4.36738809214695,5.35286966391485,2.83864347061082,3.27995961979597,5.11608369537122,4.5481500811197,0,0,2.21243002250044,0.521301686808497,3.32861967686659,4.80400793335198,0,0,0,0.303127571446259,0,1.20956117331872,0.496215615637554,5.21770709179412,5.61320188866147,2.43464383585832,0.511707249066704,3.53878626515936,4.45254199334973,0.308419387605311,1.59805552781814,0.0821271560138091,1.03850885836724,0.464841513839837,0,0,0,0.229628896329213,0.546273504020151,1.44236856455367,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0.183138929636687,0.577566499444116,0,0,0,0,0.154048617114644,0.15350367472613,0.827019434907183,1.07420244868274,1.16013355131383,0.340906509664404,0.890320356467374,0,0,0,0,1.39453664789186,22.0368642781448,0.6970372701606,0.308033580176089,0.532306030317022,1.73986598415015,0.55597265731176,1.00187420719394,0.372158369359667,0.632758849437452,1.33441135746677,1.02359116524534,1.71175595213568,0.636406495851874,3.92474320099615,0.359744915166629,0.54907405947211,0.589062011728432,0.606547444719948,0,1.26377536871694,0.975267478179181,0,2.11300293513511,2.32049849393576,1.1312434556297,0,1.65409603063837,0,0,0.578775534266688,2.62357900818653,0,0.30982349809975,2.25356482025793,0.143411352204052,2.06322986127554,0.35667105148125,0.354761064070598,0.633322905892992,0,0.75894634753143,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.24415835064723,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,14.4463976513782,0.234264445725339,0,0,0,0,2.41981432097328,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.00540296419651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08956724041624,3.27198633786114,1.10961172300523,0.189403005275089,1.25783950876288,2.66943366478961,0.686520205190771,2.41969478021182,4.19680441573507,0.295710299979268,0.318593534327405,0.449803112163605,1.39736661188633,0.829412415681711,1.32920857278997,1.5652351854352,3.75644022493046,0.380805212168795,0,0.909243296012797,1.18151612746737,0.928067519756987,1.19428766609585,0,4.12074846219351,3.70424437642511,0,0,0.214441591374926,0,0.906823702049089,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,1.27201740261367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| ||
|short_description=p@chr1:224983437..224983438,+ | |||
}} | }} |
Latest revision as of 04:27, 28 July 2015
Short description: | p@chr1:224983437..224983438, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:224983437..224983438, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.47e-25 | 76 |
multi fate stem cell | 1.23e-12 | 427 |
somatic stem cell | 4.11e-12 | 433 |
stem cell | 1.94e-11 | 441 |
connective tissue cell | 1.31e-10 | 361 |
skin fibroblast | 1.76e-09 | 23 |
mesenchymal cell | 3.71e-09 | 354 |
motile cell | 1.66e-07 | 386 |
mesenchymal stem cell of adipose | 7.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.86e-10 | 371 |
integument | 5.00e-09 | 46 |
integumental system | 5.00e-09 | 46 |
skin of body | 2.47e-08 | 41 |
adipose tissue | 2.89e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.60e-08 | 5 |
myotonic disease | 1.60e-08 | 5 |
muscle tissue disease | 1.60e-08 | 5 |
myopathy | 1.60e-08 | 5 |
muscular disease | 1.60e-08 | 5 |
myotonic dystrophy | 1.60e-08 | 5 |