FFCP PHASE1:Hg19::chr1:226496898..226496907,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:226496898..226496907,-
|short_description=p3@LIN9
|description=CAGE_peak_3_at_LIN9_5end
|association_with_transcript=-25bp_to_ENST00000460719_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286826 | |EntrezGene=286826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30830 | |HGNC=30830 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000460719_5end | |||
|cluster_id=chr1:226496898..226496907,- | |||
|description=CAGE_peak_3_at_LIN9_5end | |||
|id=chr1:226496898..226496907,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;7.07e-34;2!CL:0000558;7.07e-34;2!CL:0002601;7.36e-18;1!CL:0000047;7.97e-10;2!CL:0002328;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.39e-34,2;CL:0000765,8.39e-34,2;CL:0000050,8.39e-34,2;CL:0000038,8.39e-34,2;CL:0000558,8.39e-34,2;CL:0000547,8.39e-34,2;CL:0000549,8.39e-34,2;CL:0000550,8.39e-34,2;CL:0000552,8.39e-34,2;CL:0002601,1.70e-17,1;CL:0002328,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.47e-07;10!UBERON:0007687;1.47e-07;10 | |||
|ontology_enrichment_disease=DOID:162!7.22e-26!235;DOID:14566!6.96e-25!239;DOID:0050687!4.13e-18!143;DOID:305!1.09e-14!106;DOID:0050686!2.68e-10!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;8.14e-07;3!UBERON:0002031;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.50e-07,3;UBERON:0002031,6.50e-07,3 | |||
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| ||
|short_description=p3@LIN9 | |||
}} | }} |
Latest revision as of 01:30, 16 September 2015
Short description: | p3@LIN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIN9_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000460719_5end |
EntrezGene: | LIN9 |
HGNC: | 30830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.39e-34 | 2 |
erythroblast | 8.39e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 8.39e-34 | 2 |
erythroid progenitor cell | 8.39e-34 | 2 |
reticulocyte | 8.39e-34 | 2 |
proerythroblast | 8.39e-34 | 2 |
basophilic erythroblast | 8.39e-34 | 2 |
polychromatophilic erythroblast | 8.39e-34 | 2 |
orthochromatic erythroblast | 8.39e-34 | 2 |
uterine smooth muscle cell | 1.70e-17 | 1 |
bronchial epithelial cell | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.50e-07 | 3 |
epithelium of bronchus | 6.50e-07 | 3 |