FFCP PHASE1:Hg19::chr16:67563327..67563348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79567 | |EntrezGene=79567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25836 | |HGNC=25836 | ||
|TSSclassifier=strong | |||
|UniProt=B4DEQ9,E9PBS3,Q6ZS17 | |UniProt=B4DEQ9,E9PBS3,Q6ZS17 | ||
|association_with_transcript=-191bp_to_NM_001193523_5end | |association_with_transcript=-191bp_to_NM_001193523_5end | ||
|cluster_id=chr16:67563327..67563348,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_13_at_FAM65A_5end | |description=CAGE_peak_13_at_FAM65A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002543;7.25e-08;6 | |ontology_enrichment_celltype_v019=CL:0002543;7.25e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002543,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!7.73e-07!2;UBERON:0002757!7.73e-07!2;UBERON:0010134!7.73e-07!2;UBERON:0002784!7.73e-07!2;UBERON:0005408!7.73e-07!2;UBERON:0001899!7.73e-07!2 | |ontology_enrichment_uberon=UBERON:0001905!7.73e-07!2;UBERON:0002757!7.73e-07!2;UBERON:0010134!7.73e-07!2;UBERON:0002784!7.73e-07!2;UBERON:0005408!7.73e-07!2;UBERON:0001899!7.73e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.34e-79;2!UBERON:0002757;2.34e-79;2!UBERON:0010134;2.34e-79;2!UBERON:0005408;2.34e-79;2!UBERON:0001899;2.34e-79;2!UBERON:0003296;2.22e-40;4!UBERON:0010133;2.22e-40;4!UBERON:0002784;2.22e-40;4!UBERON:0001894;1.28e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.70e-09;20!UBERON:0002104;1.37e-08;21!UBERON:0000020;6.29e-08;23!UBERON:0001032;1.23e-07;24!UBERON:0004456;1.23e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;2.34e-79;2!UBERON:0002757;2.34e-79;2!UBERON:0010134;2.34e-79;2!UBERON:0005408;2.34e-79;2!UBERON:0001899;2.34e-79;2!UBERON:0003296;2.22e-40;4!UBERON:0010133;2.22e-40;4!UBERON:0002784;2.22e-40;4!UBERON:0001894;1.28e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.70e-09;20!UBERON:0002104;1.37e-08;21!UBERON:0000020;6.29e-08;23!UBERON:0001032;1.23e-07;24!UBERON:0004456;1.23e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.34e-79,2;UBERON:0002757,2.34e-79,2;UBERON:0010134,2.34e-79,2;UBERON:0005408,2.34e-79,2;UBERON:0001899,2.34e-79,2;UBERON:0003296,2.22e-40,4;UBERON:0010133,2.22e-40,4;UBERON:0002784,2.22e-40,4;UBERON:0001894,1.28e-23,7;UBERON:0006222,1.28e-23,7;UBERON:0000970,1.37e-08,21;UBERON:0002104,1.37e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.23e-07,24;UBERON:0001032,1.23e-07,24;UBERON:0004456,1.23e-07,24 | |||
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| ||
|short_description=p13@FAM65A | |short_description=p13@FAM65A | ||
}} | }} |
Latest revision as of 11:19, 17 September 2015
Short description: | p13@FAM65A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FAM65A_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -191bp_to_NM_001193523_5end |
EntrezGene: | FAM65A |
HGNC: | 25836 |
UniProt: | B4DEQ9E9PBS3Q6ZS17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.34e-79 | 2 |
regional part of epithalamus | 2.34e-79 | 2 |
secretory circumventricular organ | 2.34e-79 | 2 |
circumventricular organ | 2.34e-79 | 2 |
epithalamus | 2.34e-79 | 2 |
gland of diencephalon | 2.22e-40 | 4 |
neuroendocrine gland | 2.22e-40 | 4 |
regional part of diencephalon | 2.22e-40 | 4 |
diencephalon | 1.28e-23 | 7 |
future diencephalon | 1.28e-23 | 7 |
eye | 1.37e-08 | 21 |
visual system | 1.37e-08 | 21 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
sense organ | 1.23e-07 | 24 |
sensory system | 1.23e-07 | 24 |
entire sense organ system | 1.23e-07 | 24 |