FFCP PHASE1:Hg19::chr8:8243933..8243954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157285 | |EntrezGene=157285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E5RFL5 | |UniProt=E5RFL5 | ||
|association_with_transcript=53bp_to_ENST00000520004_5end | |association_with_transcript=53bp_to_ENST00000520004_5end | ||
|cluster_id=chr8:8243933..8243954,- | |||
|description=CAGE_peak_1_at_SGK223_5end | |description=CAGE_peak_1_at_SGK223_5end | ||
|id=chr8:8243933..8243954,- | |id=chr8:8243933..8243954,- | ||
|ontology_enrichment_celltype=CL:0000066!9.86e-11!254;CL:0000223!5.44e-09!59;CL:0002076!8.74e-08!43;CL:0000115!8.86e-08!35;CL:0000076!1.90e-07!62;CL:0002139!1.97e-07!24 | |ontology_enrichment_celltype=CL:0000066!9.86e-11!254;CL:0000223!5.44e-09!59;CL:0002076!8.74e-08!43;CL:0000115!8.86e-08!35;CL:0000076!1.90e-07!62;CL:0002139!1.97e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.95e-07;24!CL:0000115;5.01e-07;36 | |ontology_enrichment_celltype_v019=CL:0002139;1.95e-07;24!CL:0000115;5.01e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.40e-11,253;CL:0000223,9.35e-10,58;CL:0002076,1.56e-08,42;CL:0000115,3.26e-08,36;CL:0002139,1.94e-07,24;CL:0000076,6.02e-07,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.77e-07!82;UBERON:0004119!3.47e-07!169;UBERON:0000925!3.47e-07!169;UBERON:0006595!3.47e-07!169;UBERON:0004111!3.88e-07!241;UBERON:0000487!8.97e-07!22;UBERON:0005409!9.75e-07!35 | |ontology_enrichment_uberon=UBERON:0001017!2.77e-07!82;UBERON:0004119!3.47e-07!169;UBERON:0000925!3.47e-07!169;UBERON:0006595!3.47e-07!169;UBERON:0004111!3.88e-07!241;UBERON:0000487!8.97e-07!22;UBERON:0005409!9.75e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;9.84e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000487;9.84e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.33e-07,81;UBERON:0004111,4.95e-07,240;UBERON:0000487,8.87e-07,22;UBERON:0000025,9.94e-07,192 | |||
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| ||
|short_description=p1@SGK223 | |short_description=p1@SGK223 | ||
}} | }} |
Latest revision as of 06:17, 19 September 2015
Short description: | p1@SGK223 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SGK223_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000520004_5end |
EntrezGene: | SGK223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.40e-11 | 253 |
endodermal cell | 9.35e-10 | 58 |
endo-epithelial cell | 1.56e-08 | 42 |
endothelial cell | 3.26e-08 | 36 |
endothelial cell of vascular tree | 1.94e-07 | 24 |
squamous epithelial cell | 6.02e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.33e-07 | 81 |
anatomical conduit | 4.95e-07 | 240 |
simple squamous epithelium | 8.87e-07 | 22 |
tube | 9.94e-07 | 192 |