FFCP PHASE1:Hg19::chr20:9079545..9079556,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:9079545..9079556,+ | |||
|coexpression_cluster_id=C1071 | |coexpression_cluster_id=C1071 | ||
|description=CAGE_peak_at_chr20:9079545..9079556,+ | |description=CAGE_peak_at_chr20:9079545..9079556,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.69e-21;1!CL:0000159;1.92e-11;2 | |ontology_enrichment_celltype_v019=CL:0000313;1.69e-21;1!CL:0000159;1.92e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.53e-21,1;CL:0000159,1.82e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;5.71e-21;1!UBERON:0006215;7.02e-08;3 | |ontology_enrichment_development_v019=UBERON:0004874;5.71e-21;1!UBERON:0006215;7.02e-08;3 | ||
|ontology_enrichment_disease=DOID:0050687!6.74e-08!143 | |ontology_enrichment_disease=DOID:0050687!6.74e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.69e-21;1!DOID:3112;5.71e-21;1!DOID:4468;1.92e-11;2!DOID:299;7.57e-08;25 | |ontology_enrichment_disease_v019=DOID:2152;1.69e-21;1!DOID:3112;5.71e-21;1!DOID:4468;1.92e-11;2!DOID:299;7.57e-08;25 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,1.53e-21,1;DOID:3112,4.22e-21,1;DOID:4468,2.02e-11,2;DOID:299,7.31e-08,25 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.69e-21;1!UBERON:0000989;5.71e-21;1!UBERON:0008811;5.71e-21;1!UBERON:0004909;1.92e-11;2 | |ontology_enrichment_uberon_v019=UBERON:0004911;1.69e-21;1!UBERON:0000989;5.71e-21;1!UBERON:0008811;5.71e-21;1!UBERON:0004909;1.92e-11;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.53e-21,1;UBERON:0000989,3.45e-21,1;UBERON:0008811,3.45e-21,1;UBERON:0006258,3.45e-21,1;UBERON:0005876,3.45e-21,1;UBERON:0004874,3.45e-21,1;UBERON:0004909,1.82e-11,2 | |||
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| ||
|short_description=p@chr20:9079545..9079556,+ | |short_description=p@chr20:9079545..9079556,+ | ||
}} | }} |
Latest revision as of 16:37, 28 July 2015
Short description: | p@chr20:9079545..9079556, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:9079545..9079556, + |
Coexpression cluster: | C1071_renal_serous_Olfactory_clear_mesothelioma_Fibroblast_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.53e-21 | 1 |
seromucus secreting cell | 1.82e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.53e-21 | 1 |
penis | 3.45e-21 | 1 |
intromittent organ | 3.45e-21 | 1 |
lateral plate mesenchyme | 3.45e-21 | 1 |
undifferentiated genital tubercle | 3.45e-21 | 1 |
somatopleure | 3.45e-21 | 1 |
epithelium of gonad | 1.82e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.53e-21 | 1 |
papillary adenocarcinoma | 4.22e-21 | 1 |
clear cell adenocarcinoma | 2.02e-11 | 2 |
adenocarcinoma | 7.31e-08 | 25 |